Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
255 |
512.9 |
22386308 |
99.2% |
22207217 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_008463 |
2,707,727 |
N→G |
?75P (CNT→CCT) |
PA14_RS12740 ← |
DUF2285 domain‑containing protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_008463 | 2,707,727 | 0 | N | G | 99.7%
| 1260.7
/ ‑6.8
| 324 | ?75P (CNT→CCT) | PA14_RS12740 | DUF2285 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base N (0/0); major base G (180/143); minor base T (0/1); total (180/144) |
| Fisher's exact test for biased strand distribution p-value = 4.44e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 326 total aligned reads displayed.
GCAGCAGCCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCANGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCAGGTATTCCCAAGCCA > NC_008463/2707579‑2707874
|
gcagcCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATCGAGCTGCACCACGGCATCGTGGTCAGGGac > 2:7597032/1‑149 (MQ=255)
gcagcCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGaa > 1:9543294/1‑150 (MQ=255)
gcagcCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGaa > 2:2011496/1‑150 (MQ=255)
gcagcCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGaa > 1:142385/1‑150 (MQ=255)
cagcCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAAc < 2:5403956/150‑1 (MQ=255)
agcCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAAcc < 1:7919147/150‑1 (MQ=255)
gcCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATCGAGCTGCACCACGGCATCGTGGTCAGGGACCCa > 2:8332220/1‑150 (MQ=255)
gcCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCa > 2:227735/1‑150 (MQ=255)
gcCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCa > 1:7705323/1‑150 (MQ=255)
cGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAgg > 1:10310446/1‑150 (MQ=255)
gggCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGc > 1:5857374/1‑150 (MQ=255)
ggCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGcc > 1:3941110/1‑150 (MQ=255)
gCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGACCCAGGCCg > 2:10645565/1‑150 (MQ=255)
aaTGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGAt > 1:10717307/1‑150 (MQ=255)
aaTGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGAt > 2:9109342/1‑150 (MQ=255)
aaTGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGAt < 2:7430479/150‑1 (MQ=255)
aTGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCGTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATg < 1:8478847/150‑1 (MQ=255)
tGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATgc > 1:1106770/1‑150 (MQ=255)
tGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATgc < 2:858741/150‑1 (MQ=255)
gCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATgcg < 2:1920270/150‑1 (MQ=255)
gCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATgcg < 1:6385648/150‑1 (MQ=255)
gCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATgcg < 2:7254071/150‑1 (MQ=255)
gCGACACCAGCACCAGGCGCTTGACGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAAATCGAAGGCAGGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGACCCAGGCCGGATgcg > 2:4931643/1‑150 (MQ=255)
cGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATgcgc < 2:1429978/150‑1 (MQ=255)
gACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGcgcg > 1:9478318/1‑150 (MQ=255)
acacCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGt < 2:8950953/150‑1 (MQ=255)
accagcaccagGCGCTTGCCGTCGAGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGCTAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTcg > 1:10954095/1‑150 (MQ=255)
agcaccagGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTcgcgc < 1:1124148/150‑1 (MQ=255)
agcaccagGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCATcgcgc < 2:3497264/150‑1 (MQ=255)
cccagGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCa < 2:10840325/149‑1 (MQ=255)
ccagGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCAt < 2:5834858/150‑1 (MQ=255)
cagGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATc < 2:8051976/150‑1 (MQ=255)
agGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATcc < 2:4879033/150‑1 (MQ=255)
ggCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCa > 1:8957403/1‑150 (MQ=255)
ggCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCa < 1:920200/150‑1 (MQ=255)
ggCGCTTGCCGTCGTGGATCAGTAGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCa < 2:7409709/150‑1 (MQ=255)
gcgcTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCaa < 1:7015623/150‑1 (MQ=255)
cgcTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAg < 1:7781098/150‑1 (MQ=255)
cTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGc < 2:10544777/150‑1 (MQ=255)
tGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTg > 1:9655506/1‑150 (MQ=255)
tGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCAACCAAGGCTg > 2:4794049/1‑150 (MQ=255)
gCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTgg > 1:8783836/1‑150 (MQ=255)
cggtggtgtATCTGTTGCTTGCGGCCGGTAACGCGCCAGAACTCGAAGGCATGGGCTTGGGGTGGCGGGTCGGCGTGGGTATAGCGCTGCACCACGGAATCGTGGTCTGGGAACCAGGCGGGATGCGCGTCGCGCGCAACCAAGGCTggg < 1:2884239/145‑1 (MQ=255)
cgtcgtGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGt > 2:670946/1‑150 (MQ=255)
tcgtGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCt > 1:4645900/1‑150 (MQ=255)
tcgtGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCt < 2:4171955/150‑1 (MQ=255)
cgtGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCtt < 2:5914710/150‑1 (MQ=255)
gtGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTc > 2:7069040/1‑150 (MQ=255)
gtGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTc > 1:4993553/1‑150 (MQ=255)
tGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTcc < 1:4092306/150‑1 (MQ=255)
aTCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCcagc < 1:4336180/150‑1 (MQ=255)
cAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCcagcag < 1:10098469/150‑1 (MQ=255)
aGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcagg > 2:1681668/1‑150 (MQ=255)
aGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcagg > 2:5710736/1‑150 (MQ=255)
gTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcaggc > 2:6304777/1‑150 (MQ=255)
gTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcaggc > 1:5880710/1‑150 (MQ=255)
gTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcaggc < 2:4825710/150‑1 (MQ=255)
tgcttgcGGCCGGGAACGCGCCAGAACTCGATGGCATGGGCTTCGGGTGGCGGGTCGGCTTCGGGATTTAGATGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGTTGCGCGTCGGGCGCATCCAAGGCTGGGTCTTCCAgcaggcgc < 1:6841599/150‑1 (MQ=255)
tgcttgcGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcaggcgc > 2:2692943/1‑150 (MQ=255)
ggcttgcGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcaggcgc < 1:7199364/149‑1 (MQ=255)
tgcGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAgcaggcgcaggc < 1:356940/150‑1 (MQ=255)
gCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCa > 2:6153401/1‑150 (MQ=255)
gCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCa < 1:4527874/150‑1 (MQ=255)
gCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCa > 1:275423/1‑150 (MQ=255)
gCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCa > 2:3385755/1‑150 (MQ=255)
ccGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCaa < 1:8644548/150‑1 (MQ=255)
gggAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGc < 2:9724817/150‑1 (MQ=255)
ggAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGcc > 1:664655/1‑150 (MQ=255)
gAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCt < 2:1257632/150‑1 (MQ=255)
gcgcCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCAACGTGGTCAGGGAACCCGCCCGCATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTgcgc < 1:2135133/150‑1 (MQ=255)
ccAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGcgccgc > 2:6214766/1‑150 (MQ=255)
aGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGTATAGAGCTGCACCACGGCAACGTGGTCAGGTAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGt < 1:2535898/150‑1 (MQ=255)
aGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGt > 1:1911390/1‑150 (MQ=255)
ttGGGTTTGGGGGGGGGGGTCGGGGGGGGGATTGAGCGGCCCCCGGGCTTGGTGTTCGGGGACCCAGGCGGGAGGGGGGTCGCGCGAATCCACGGGTGGTTGTGCCAGCTGGCGCTGGAGCCAAGCATGGGCCGCGTCCGGCCAgcggcg < 2:2795814/149‑1 (MQ=255)
tGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGa > 2:3927025/1‑150 (MQ=255)
cTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGTTCCGGTACCCTGGCCGGATGCGCGTCGCGCGCTTCCACGGCGGGGTATTCCAGCCGGCGCAGGCACCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGgc < 2:10974701/150‑1 (MQ=255)
ggggggggggggCCGGCGTGGGTATAGCCCTCCACCCCGGAACCTTGGTCTGGCAACCTGGCGGGAGGCGCGCCGCGCGAATCCACGGGGGGGTCTTCCCCCCGGCGCTGGCTCCAACCCTGCGCCGCGTCCGGCCAGCGGCGACGgcgc < 2:1213653/148‑1 (MQ=255)
cGGGTCGGCGTCGGGATCGCGCCCCCCCCCGGCTGCGTGTTCAGGTAACCTGGCCGTATGCGCGTCCCGCGCTTCCATGCCGGGGGATTCCCGCAGGCGCAGGCTCCAACCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTc < 2:8767873/150‑1 (MQ=255)
gggTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTcg > 1:5996733/1‑150 (MQ=255)
tCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCgcgg > 1:5646623/1‑150 (MQ=255)
ggCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCgcggcg > 1:1780711/1‑150 (MQ=255)
tCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTaa > 2:6563398/1‑150 (MQ=255)
tCGGGATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTaa > 1:10439013/1‑150 (MQ=255)
gggCTAGAGCTGCACCACGGCATCGGGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGATGGGTCGTCCGGCAGGCGCAGGCTCCAGTCCTTCGCCGCGTCCGGCCCGCGGCGACGGCGCAGCCAGTCGCGGCGGTGATc > 1:5424885/1‑150 (MQ=255)
gggATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATc > 1:1750910/1‑150 (MQ=255)
gggATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATc > 2:2954033/1‑150 (MQ=255)
ggATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCg > 2:3294370/1‑150 (MQ=255)
taTAGAGCTCCACCACGGCATCGTGGTCAGGGAACCAGGCCGCATGCGCGTCGCGCGAATCCAAGGCGGGGTCTTCCAGCAGGCGCAGGCACCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCgg < 2:7895531/149‑1 (MQ=255)
gATAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCgg > 2:7810136/1‑150 (MQ=255)
aTAGAGCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCggg > 1:8298190/1‑150 (MQ=255)
gagCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGAtt > 1:6044930/1‑150 (MQ=255)
gagCTGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGAtt > 2:5550874/1‑150 (MQ=255)
tGCACCACGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTg > 1:4038404/1‑150 (MQ=255)
accacGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTgcgc > 1:442468/1‑150 (MQ=255)
cacGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCAg > 1:10165679/1‑150 (MQ=255)
ccggattCGTGGTCCGGGAACCCGGCCGGAGGCGCGTCGCGCGCATCCATGGCTGGGTCTTCCAGCTGGCGCAGGATCCCAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCAgg < 2:6847376/144‑1 (MQ=255)
acGGCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCAgg > 1:910586/1‑150 (MQ=255)
ggCATCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCAGGTa > 2:9284946/1‑150 (MQ=255)
gcaaTCGTGGACTGGGAACCGGGCGGGTTGCGCGGCGCGCCCACCCATGGCTGGTTCTGCCAGCCGGCGCAGGCTCCAAGCCTGCCCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCAGGTa < 2:1109961/147‑1 (MQ=255)
cctCGTGGTCAGGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCTGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCAGGTAtt > 1:8188310/3‑150 (MQ=255)
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GCAGCAGCCGGGCCAATGCGACACCAGCACCAGGCGCTTGCCGTCGTGGATCAGTTGCTTGCGGCCGGGAACGCGCCAGAACTCGAAGGCATGGGCTTCGGGTGGCGGGTCGGCGTCGGGATAGAGCTGCACCACGGCATCGTGGTCANGGAACCAGGCCGGATGCGCGTCGCGCGCATCCAAGGCTGGGTCTTCCAGCAGGCGCAGGCTCCAAGCCTGCGCCGCGTCCGGCCAGCGGCGACGGCGCAGCCAGTCGCGGCGGTAATCGGGATTCCTGCGCAGGTATTCCCAAGCCA > NC_008463/2707579‑2707874
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
