Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
154 |
26.6 |
2069536 |
90.2% |
1866721 |
108.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
AM260479 |
724,768 |
+C |
coding (82/669 nt) |
lysE → |
lysine efflux permease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | AM260479 | 724,766 | 1 | . | C | 100.0%
| 122.4
/ NA
| 32 | R27P (CGC→CCC) | lysE | lysine efflux permease |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (15/17); total (15/17) |
GATCCTGGGTGTAGTGGCGTGAGGTAGTCCTGCGGCAGGAATGGGAAGATGGGCGGGCATGGCGGCTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCG‑CCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGTCTGCCTGGTGTGCGCGCTTTCCGATG > AM260479/724639‑724894
|
gATCCTGGGTGTAGTGGCGTGAGGTAGTCCTGCGGCAGGAATGGGAAGATGGGCGGGCATGGCGGCTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACgccg‑ccctgg > 2:680292/1‑130 (MQ=255)
gCGTGAGGTAGTCCTGCGGCAGGAATGGGAAGATGGGCGGGCATGGCGGCTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCgg > 1:46205/1‑134 (MQ=255)
gTAGTCCTGCGGCAGGAATGGGAAGATGGGCGGGCATGGCGGCTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTcc > 2:444090/1‑134 (MQ=255)
gCAGGAATGGGAAGATGGGCGGGCATGGCGGCTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGc < 2:924949/134‑1 (MQ=255)
tGGGAAGATGGGCGGGCATGGCGGCTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGt > 1:636745/1‑134 (MQ=255)
aaGATGGGCGGGCATGGCGGCTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTccc < 2:636745/134‑1 (MQ=255)
cATGGCGGCTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCg < 1:582117/134‑1 (MQ=255)
cTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCg < 2:47379/84‑1 (MQ=255)
cTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCg > 1:47379/1‑84 (MQ=255)
cccGGCGTGCAATAATAGCCACCC‑AAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAggg > 1:100465/1‑134 (MQ=255)
cAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGCATGCTTTCGTGCTGCGCCAAGGGTTgcggcg > 2:236740/1‑134 (MQ=255)
cAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTgcggcg < 1:680292/134‑1 (MQ=255)
taataGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGa < 1:475357/134‑1 (MQ=255)
taataGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGa < 2:46205/134‑1 (MQ=255)
taataGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGa < 1:444090/134‑1 (MQ=255)
aataGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAgg < 1:55212/121‑1 (MQ=255)
aataGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAgg > 2:55212/1‑121 (MQ=255)
cccaaaaaaCAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTc < 2:100465/131‑1 (MQ=255)
aaaaaaaCAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGa > 1:851283/1‑122 (MQ=255)
aaaaaaaCAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGa < 2:851283/122‑1 (MQ=255)
aaaaaaaCAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTg > 1:574656/1‑134 (MQ=255)
gTTCCACATCCAATGCACGCCGCCCTGGCCGGCTtct < 1:1012843/37‑1 (MQ=37)
gTTCCACATCCAATGCACGCCGCCCTGGCCGGCTtct > 2:1012843/1‑37 (MQ=37)
gTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCttt < 2:206696/49‑1 (MQ=38)
gTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCttt > 1:206696/1‑49 (MQ=38)
gTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAg < 1:663216/111‑1 (MQ=255)
gTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAg > 2:663216/1‑111 (MQ=255)
aTGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCtt < 1:504961/36‑1 (MQ=37)
aTGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCtt > 2:504961/1‑36 (MQ=37)
tGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGTCTGCCTGGTGTGCGCGCTTTcc < 2:594266/134‑1 (MQ=255)
aCGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGTCTGCCTGGTGTGCGCGCTTTcc < 2:313348/131‑1 (MQ=255)
aCGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGTCTGCCTGGTGTGCGCGCTTTcc > 1:313348/1‑131 (MQ=255)
aCGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGTCTGCCTGGTGTGCGCGCTTTCCGAt > 1:912625/1‑134 (MQ=255)
cgccgcCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGa > 2:305246/1‑93 (MQ=255)
cgccgcCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGa < 1:305246/93‑1 (MQ=255)
cgccgcCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCt < 1:551897/104‑1 (MQ=255)
cgccgcCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCt > 2:551897/1‑104 (MQ=255)
cgccgcCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGTCTGCCTGGTGTGCGCGCTTTCCGATg > 2:331178/1‑134 (MQ=255)
|
GATCCTGGGTGTAGTGGCGTGAGGTAGTCCTGCGGCAGGAATGGGAAGATGGGCGGGCATGGCGGCTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCG‑CCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGTCTGCCTGGTGTGCGCGCTTTCCGATG > AM260479/724639‑724894
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATCCTGGGTGTAGTGGCGTGAGGTAGTCCTGCGGCAGGAATGGGAAGATGGGCGGGCATGGCGGCTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCG‑CCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGTCTGCCTGGTGTGCGCGCTTTCCGATGCGCTG > AM260479/724640‑724899
|
ATCCTGGGTGTAGTGGCGTGAGGTAGTCCTGCGGCAGGAATGGGAAGATGGGCGGGCATGGCGGCTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGT > GWNJ‑0478:712:GW2002102894th:2:1102:3090:18494/1‑150 (MQ=60)
ttttttttttttttttcaagcagaagacggcatacgagatgtagctccgtctcgtgggctcggagatgtgtataagagacagCCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCC < GWNJ‑0478:712:GW2002102894th:2:2215:20873:80579/67‑1 (MQ=60)
tctttttttttttttttcaagcagaagacggcatacgagatgtagctccgtctcgtgggctcggagatgtgtataagagacagGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCC < GWNJ‑0478:712:GW2002102894th:2:1216:13414:20581/66‑1 (MQ=60)
GTCCTGCGGCAGGAATGGGAAGATGGGCGGGCATGGCGGCTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTT > GWNJ‑0478:712:GW2002102894th:2:2109:6265:7043/1‑150 (MQ=60)
GGGCGGGCATGGCGGCTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCctgtctcttatacacatctccgagcccacgagacgg > GWNJ‑0478:712:GW2002102894th:2:1102:17813:26000/1‑114 (MQ=60)
GGCATGGCGGCTGCCCCCGGCGTGCAATAATAGCCACCC‑AAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGT > GWNJ‑0478:712:GW2002102894th:2:1106:17440:79346/1‑150 (MQ=60)
GCATGGCGGCTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGT < GWNJ‑0478:712:GW2002102894th:2:2104:8565:50868/150‑1 (MQ=60)
gacggcatacgagatgtagctccgtctcgtgggctcggagatgtgtataagagacagGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCG < GWNJ‑0478:712:GW2002102894th:2:1104:4334:50580/93‑1 (MQ=60)
CCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCA < GWNJ‑0478:712:GW2002102894th:2:1102:14496:81285/150‑1 (MQ=60)
GCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTG < GWNJ‑0478:712:GW2002102894th:2:2110:7778:66583/150‑1 (MQ=60)
CAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGG > GWNJ‑0478:712:GW2002102894th:2:2209:6040:29123/1‑150 (MQ=60)
CAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGG > GWNJ‑0478:712:GW2002102894th:2:2105:18016:98615/1‑150 (MQ=60)
gggctcggagatgtgtataagagacagTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGT < GWNJ‑0478:712:GW2002102894th:2:1205:18886:48476/123‑1 (MQ=60)
ATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTgtctcttatacacatctccgagcccacgagacggagctacatctcgtatgccgtcttctgcttgaaaaaaaaaaaaaaaaaaa > GWNJ‑0478:712:GW2002102894th:2:1116:7075:2390/1‑66 (MQ=60)
ATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGT < GWNJ‑0478:712:GW2002102894th:2:1213:8212:91139/150‑1 (MQ=60)
ATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGT < GWNJ‑0478:712:GW2002102894th:2:1215:12495:61745/150‑1 (MQ=60)
aagagacagCCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGTC < GWNJ‑0478:712:GW2002102894th:2:2111:16339:64770/141‑1 (MQ=60)
CCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCActgtctcttatacacatctccgagcccacgagacggagctacatctcgtatgccgtcttctgcttgaaaa > GWNJ‑0478:712:GW2002102894th:2:1115:18449:16882/1‑79 (MQ=60)
gtgtataagagacagTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGTCTGCCTGGTGT < GWNJ‑0478:712:GW2002102894th:2:2102:8532:37879/134‑1 (MQ=60)
agatgtgtataagagacagacgccgcCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGTCTGCCTGGTGTGCGCGCTTTCC < GWNJ‑0478:712:GW2002102894th:2:2110:13123:50734/124‑1 (MQ=60)
TTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGTCTGCCTGGTGTGCGCGCTTTCCGATG > GWNJ‑0478:712:GW2002102894th:2:1205:7314:100407/1‑150 (MQ=60)
TTCCACATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGTCTGCCTGGTGTGCGCGCTTTCCGATG > GWNJ‑0478:712:GW2002102894th:2:2211:13783:12577/1‑150 (MQ=60)
CATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTctgtctcttatacacatctccgagcccacgagacgg > GWNJ‑0478:712:GW2002102894th:2:1110:10780:2512/1‑112 (MQ=60)
CATCCAATGCACGCCGCCCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGTCTGCCTGGTGTGCGCGCTTTCCGATGCGCTG > GWNJ‑0478:712:GW2002102894th:2:1108:15574:89434/1‑150 (MQ=60)
|
ATCCTGGGTGTAGTGGCGTGAGGTAGTCCTGCGGCAGGAATGGGAAGATGGGCGGGCATGGCGGCTGCCCCCGGCGTGCAATAATAGCCACCCAAAAAAACAGCCGTTCCACATCCAATGCACGCCG‑CCTGGCCGGCTTCTCCCTCGGTCTTTCCCTGATTCTTGCCATCGGTTCCCAGAATGCTTTCGTGCTGCGACAAGGGTTGCGGCGCGAGCATGTGTTCTGGGTCTGCCTGGTGTGCGCGCTTTCCGATGCGCTG > AM260479/724640‑724899
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
