Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATGGAAGGGTGTTTAGAAAAGGAGGATTTAGTTTACTCAAGTAGTTTTTCTGTTAATATGAAGCAAATCGAACTGAAACCGGCACGCTCTTTTGAACATGAGAATATTTTCAAAGTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAACTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAA  >  BK006934/357908‑358473
                                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                             
GTGGAAAGGTGTTTAGAAAAGGAGGATTTAGGTTATGTAAGTGTTTTTTCTGTTAAAATGAAGCAAATAGAACTGAAACCGGGACGCTCTTTTGAACATGAGAATGTTTGCAAAGTAGTTTCATTAGCATTTAAAAAAATCAATGAATTACCTCATGAAAATTAGGATATAACAATATAGAATAAATGAATGGAACGGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATTCAAAACAAGCTATGGGAACGAACTCTCCCTGTCAATGAGTTCTTTCTCTATACTACCTAATTCAG                                                                                                                                                                                                                                                                           <  SRR13385771.1538885/301‑1 (MQ=60)
  GGAAGGGTGTTTAGAAAAGGAGGATTTAGTTTATTCAAGTAGTTTTTCTGTTAATATGAAGCAAATCGAACTGAAACCGGCACGCTCTTTTGAACATGAGAATGTTTTCAAAGTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGC                                                                                                                                                                                                                                                                          <  SRR13385771.66833/300‑1 (MQ=60)
       GGTGTTTAGAAAAGGAGGATTTAGTTTATTCAAGTAGTTTTTCTGTTAATATGAAGCAAATCGAACTGAAACCGGCACGCTCTTTTGAACATGATAATGTTTTCAAAGTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCACCAGAAA                                                                                                                                                                                                                                                                     >  SRR13385771.1810984/1‑300 (MQ=60)
       GGTGTTTAGAAAAGGAGGATTTAGTTTATTCAAGTAGTTTTTCTGTTAATATGAAGCAAATCGAACTGAAACCGGCACGCTCTTTTGAACATGAGAATGTTTTCAAAGTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAA                                                                                                                                                                                                                                                                     >  SRR13385771.1859396/1‑300 (MQ=60)
          GTTTAGAAAAGGAGGATTTAGTTTATTCAAGTAGTTTTTCTGTTAATATGAAGCAAATCGAACTGAAACCGGCACGCTCTTTTGAACATGAGAATGTGTTCAAAGTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATT                                                                                                                                                                                                                                                                  <  SRR13385771.1188358/300‑1 (MQ=60)
                AAAAGGAGGATTTAGTTTATTCAAGTAGTTTTTCTGTTAATATGAAGCAAATCGAACTGAAACCGGCACGCTCTTTTGAACATGAGAATGTTTTCAAATTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTT                                                                                                                                                                                                                                                           >  SRR13385771.168223/1‑301 (MQ=60)
                  AAGGAGGATTTAGTTTATTCAAGTAGTTTTTCTGTTAATATGAAGCAAATCGAACTGAAACCGGCACGCTCTTTTGAACATGAGAATGTTTTCAAAGTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGG                                                                                                                                                                                                                                                         >  SRR13385771.630082/1‑301 (MQ=60)
                            TAGTTTATTCAAGTAGTTTTTCTGTTAATATGAAGCAAATCGAACTGAAACCGGCACGCTCTTTTGAACATGAGAATGTTTTCAAAGTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACT                                                                                                                                                                                                                                               >  SRR13385771.190469/1‑301 (MQ=60)
                             AGTTTATTCAAGTAGTTTTTCTGTTAATATGAAGCAAATCGAACTGAAACCGGCACGCTCTTTTGAACATGAGAATGTTTTCAAAGTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATGCAGCAGAAAATTTTCACTTGGAAACTGCACT                                                                                                                                                                                                                                               <  SRR13385771.750333/300‑1 (MQ=60)
                                    TCAAGTAGTTTTTCTGTTAATATGAAGCAAATCGAACTGAAACCGGCACGCTCTTTTGAACATGAGAATGTTTTCAAAGTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCA                                                                                                                                                                                                                                        <  SRR13385771.535695/300‑1 (MQ=60)
                                           GTTTTTCTGTTAATATGAAGCAAATCGAACTGAAACCGGCACGCTCTTTTGAACATGAGAATGTTTTCAAAGTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGA                                                                                                                                                                                                                                <  SRR13385771.16663/301‑1 (MQ=60)
                                                         ATGAAGCAAATCGAACTGAAACCGGCACGCTCTTTTGAACATGAGAATGTTTTCAAAGTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCA                                                                                                                                                                                                                   <  SRR13385771.1647953/300‑1 (MQ=60)
                                                                     GAACTGAAACCGGCACGCTCTTTTGAACATGAGAATGTTTTCAAAGTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATGATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCA                                                                                                                                                                                                       >  SRR13385771.568622/1‑300 (MQ=60)
                                                                       ACTGAAAACGGCACGCTCTTTTGAACATGAGAATGTTTTCAAAGTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGA                                                                                                                                                                                                    <  SRR13385771.1249998/301‑1 (MQ=60)
                                                                                      CTCTTTTGAACATGAGAATGTTTTCAAAGTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAAAAGGT                                                                                                                                                                                     >  SRR13385771.697140/1‑301 (MQ=60)
                                                                                                             TCAAAGTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAA                                                                                                                                                               <  SRR13385771.1838331/300‑1 (MQ=60)
                                                                                                                           TTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCA                                                                                                                                                                                                       >  SRR13385771.1717258/1‑246 (MQ=60)
                                                                                                                               CATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGC                                                                                                                                            <  SRR13385771.1736328/301‑1 (MQ=60)
                                                                                                                                                  ATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATTCAGATAGGGTATATTCGAA                                                                                                                          >  SRR13385771.550943/1‑300 (MQ=60)
                                                                                                                                                              AAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAACTATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAACTGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGCGTCAAGTTG                                                                                                             >  SRR13385771.1816829/1‑301 (MQ=60)
                                                                                                                                                                          AACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGT                                                                                                 >  SRR13385771.162495/1‑301 (MQ=60)
                                                                                                                                                                          AACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGT                                                                                                 <  SRR13385771.209978/301‑1 (MQ=60)
                                                                                                                                                                           ACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAACTATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGT                                                                                                 >  SRR13385771.1677580/1‑300 (MQ=60)
                                                                                                                                                                                       AAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTG                                                                                    <  SRR13385771.1341305/301‑1 (MQ=60)
                                                                                                                                                                                        AATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGG                                                                                   <  SRR13385771.608110/301‑1 (MQ=60)
                                                                                                                                                                                         ATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATACTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGT                                                                                  >  SRR13385771.120913/1‑301 (MQ=60)
                                                                                                                                                                                             ATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATAT                                                                              <  SRR13385771.509673/301‑1 (MQ=60)
                                                                                                                                                                                                  ACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAAT                                                                         <  SRR13385771.1385485/301‑1 (MQ=60)
                                                                                                                                                                                                         TATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGA                                                                    >  SRR13385771.1395263/1‑299 (MQ=60)
                                                                                                                                                                                                                   CAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTGGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGGAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGA                                                        <  SRR13385771.511179/301‑1 (MQ=60)
                                                                                                                                                                                                                         aaggccaacgttagGAATGCAAAACAAGCTATGGTAAAGAAATCTCCCTTTCAAATATTTAATTCTCTATACTACCTAATTCAGCAGACAATTTTCACTTGGAAACTGCACTTTTACCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTAAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGA                                                  <  SRR13385771.580349/287‑1 (MQ=60)
                                                                                                                                                                                                                          AGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGA                                                     >  SRR13385771.1611709/1‑297 (MQ=60)
                                                                                                                                                                                                                               CACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTT                                             <  SRR13385771.1065610/300‑1 (MQ=60)
                                                                                                                                                                                                                                          TGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATT                                 >  SRR13385771.1106335/1‑301 (MQ=60)
                                                                                                                                                                                                                                           GGAAAACAAGCGATGGTAACGAACTCTCCCTTGCAAATATTTCTGTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTGGGAAACGGCACTTTTCCCAGCTACGGAAGAGGATGGGCCAAGGACAGTGTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGAGGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCGACCATCTGGTATATGGAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTA                                <  SRR13385771.1215292/301‑1 (MQ=60)
                                                                                                                                                                                                                                                    GCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTAAATAAACT                        >  SRR13385771.399550/1‑300 (MQ=60)
                                                                                                                                                                                                                                                            AACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTT               <  SRR13385771.941171/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                          TTCAAATATTTCTTTCTCTATACTACCTAATTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGAACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAA  <  SRR13385771.1247519/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                             
ATGGAAGGGTGTTTAGAAAAGGAGGATTTAGTTTACTCAAGTAGTTTTTCTGTTAATATGAAGCAAATCGAACTGAAACCGGCACGCTCTTTTGAACATGAGAATATTTTCAAAGTAGGCTCATTAGCATTCAAAAAAATCAATGAATTACCTCATGAAAATTATGATATAACAATAGAGAAGAAATCAATGGAACAGAATTATCTAAGACCAGAGATAGGCTCACGTTCTGAATGCAAAACAAGCTATGGTAACGAACTCTCCCTTTCAAATATTTCTTTCTCTATACTACCTAACTCAGCAGAAAATTTTCACTTGGAAACTGCACTTTTCCCAGCTACGGAAGAGGATGTGCCAAGGACATTTTCAAGAATATTAGAAACAGGTTCGTTTCAAAATTATTATCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAA  >  BK006934/357908‑358473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑