Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCCCTTCATATCTACATAGAATAGGTTAAGTATTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGAGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAGTATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGTATGAAATACTCGCTAACATTTTCTTTAT  >  BK006934/358417‑359002
                                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                                           
TGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTA                                                                                                                                                                                                                                                                                                <  SRR13385771.1385627/300‑1 (MQ=60)
    GAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAA                                                                                                                                                                                                                                                                                           <  SRR13385771.1290807/301‑1 (MQ=60)
       GATAGTTTCTATAAGTATTAAATAAACTAATGCTTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGT                                                                                                                                                                                                                                                                                        >  SRR13385771.170312/1‑301 (MQ=60)
                   AAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAAATACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATG                                                                                                                                                                                                                                                                            <  SRR13385771.636940/301‑1 (MQ=60)
                       ATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTAT                                                                                                                                                                                                                                                                         <  SRR13385771.1248247/300‑1 (MQ=60)
                                  TAATGAGTTTAAATCGTTATAAAAATATGCGAATTCTGGGGATCGAACGCAGGACCTCCAGATAACGTGACCGAAGGTTTGTCTTCAGTCTGGCTCTCTCTCAACGGAGCTAGAGCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATTGCTTAAGTGTTTTATTAGGTTCCAGATTAACTACTTATAGTTGGTAATATTTGGTGAATAATGATGATTGGTTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTAGTATATTATGTATACAGAATATAC                                                                                                                                                                                                                                                              <  SRR13385771.866459/300‑1 (MQ=60)
                                            AAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTC                                                                                                                                                                                                                                                   >  SRR13385771.1166123/1‑301 (MQ=60)
                                            AAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTCCTC                                                                                                                                                                                                                                                   <  SRR13385771.950996/301‑1 (MQ=60)
                                                           TATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGA                                                                                                                                                                                                                                     >  SRR13385771.1545642/1‑300 (MQ=60)
                                                                               AACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATGTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGAT                                                                                                                                                                                                                <  SRR13385771.601524/301‑1 (MQ=60)
                                                                                                                TTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAACAGGGAATCGATATTTCTACATAATATTATCATTACTTC                                                                                                                                                                                     >  SRR13385771.310162/1‑295 (MQ=60)
                                                                                                                       CAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACGTAATATTATCATTACTTCTTCCCCATCTTAT                                                                                                                                                                        >  SRR13385771.1488593/1‑301 (MQ=60)
                                                                                                                             GGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTT                                                                                                                                                                    <  SRR13385771.863403/299‑1 (MQ=60)
                                                                                                                                     CCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCA                                                                                                                                                            <  SRR13385771.732913/299‑1 (MQ=60)
                                                                                                                                        AACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATT                                                                                                                                                       >  SRR13385771.1410608/1‑301 (MQ=60)
                                                                                                                                            GAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATT                                                                                                                                                   <  SRR13385771.468661/301‑1 (MQ=60)
                                                                                                                                                 AAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATGTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAAGCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGAT                                                                                                                                              <  SRR13385771.18218/301‑1 (MQ=60)
                                                                                                                                                                 TGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATT                                                                                                                              >  SRR13385771.767824/1‑301 (MQ=60)
                                                                                                                                                                    TATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTCGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGACTCGATATTTCTACATAATCTTATCATTACTTATTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGT                                                                                                                           >  SRR13385771.1501100/1‑301 (MQ=60)
                                                                                                                                                                              CTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCA                                                                                                                   <  SRR13385771.682590/299‑1 (MQ=60)
                                                                                                                                                                                TCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAAC                                                                                                                <  SRR13385771.1353614/300‑1 (MQ=60)
                                                                                                                                                                                      CTACATAGACTAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTCTTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAAT                                                                                                         >  SRR13385771.1214244/1‑301 (MQ=60)
                                                                                                                                                                                                 AGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGTGTGAATAATTTGATAATTTTGTGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGTAGATCTTGGAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTG                                                                                              <  SRR13385771.823536/301‑1 (MQ=60)
                                                                                                                                                                                                                TTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGA                                                                                >  SRR13385771.370129/1‑300 (MQ=60)
                                                                                                                                                                                                                                                ATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAA                                               <  SRR13385771.1013529/301‑1 (MQ=60)
                                                                                                                                                                                                                                                 TATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGCGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGCTTGGTAGTTGCCAACCATTTAATACGATCCTCTGTAATATTTCTATGACTAATTATCACAGCAACGTTCAATTATCTTCAAT                                              >  SRR13385771.718861/1‑301 (MQ=60)
                                                                                                                                                                                                                                                   TTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATACTTATCACAGCAACGTTCAATTATCTTCAATTC                                            >  SRR13385771.497934/1‑301 (MQ=60)
                                                                                                                                                                                                                                                       GTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCT                                        <  SRR13385771.15790/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                  AGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGC                              >  SRR13385771.1468567/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                      TGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCACTTATCTTCAATTCGGCTTCAGTACTGCATGA                          >  SRR13385771.452880/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                      TGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGA                          <  SRR13385771.41229/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                      TGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGC                                                                  >  SRR13385771.1668618/1‑260 (MQ=60)
                                                                                                                                                                                                                                                                       GGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCACATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATATTCAATTCGGCTTAAGTACTGCATGAA                         >  SRR13385771.13744/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                           GAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACT                    <  SRR13385771.1808289/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                            AATAATTTGATAATTGTGGGATTCAATTGTTAATCAATGTTACAATATGATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTC                   <  SRR13385771.222512/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                ATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTA               <  SRR13385771.1626790/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                            TGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTT    <  SRR13385771.1034162/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                             GGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTAT  >  SRR13385771.206459/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                                           
TGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCCCTTCATATCTACATAGAATAGGTTAAGTATTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGAGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAGTATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGTATGAAATACTCGCTAACATTTTCTTTAT  >  BK006934/358417‑359002

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑