Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGTATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACGTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCGTCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACGTAAAGATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAACGCAAGGACTAGTAGTGTAATAGAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGTTCGCTGACTACTTCTCACGACTCATGTCATCTCCTTATACTGTATATGATAATATACTGGTGGTGAATGACAGCA  >  BK006934/358905‑359488
                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                             
CCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGC                                                                                                                                                                                                                                                                                             >  SRR13385771.1473532/1‑301 (MQ=60)
     GTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAG                                                                                                                                                                                                                                                                                          <  SRR13385771.1377675/299‑1 (MQ=60)
       AATATTTCTATGAATAATTAACACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGAATGAAATACTCGCTAACATTTTCTTTCTTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGAACATTAATATACGATGTATGAATTTGGCTTGAAACTGCTGTAATAAGGAACATCATCATCCATCAAATAGTAGTCACATTAGTAGTGTATTATCAAATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGAC                                                                                                                                                                                                                                                                                       <  SRR13385771.743706/300‑1 (MQ=60)
          ATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTATTATACGATGTATGCATTTGGCTTGAAACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGT                                                                                                                                                                                                                                                                                   >  SRR13385771.814518/1‑301 (MQ=60)
             TCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATGCTATAATAGCACAGTGACTCTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAG                                                                                                                                                                                                                                                                                 <  SRR13385771.1321617/300‑1 (MQ=60)
                   AATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAAT                                                                                                                                                                                                                                                                           >  SRR13385771.557933/1‑300 (MQ=60)
                       ATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAAT                                                                                                                                                                                                                                                                      <  SRR13385771.1576090/301‑1 (MQ=60)
                          ATCACAGCAACGTTCAATTATCTTCATTTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTTACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAA                                                                                                                                                                                                                                                                    <  SRR13385771.1686650/300‑1 (MQ=60)
                                        CAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTA                                                                                                                                                                                                                                                     <  SRR13385771.574978/301‑1 (MQ=60)
                                            gagctgcaggtgggggtgaggacggaaggaaagagtggcgaacagtgtcgtgatgagataataggagagggaaaggtagacgtgaaagttggcggacatgaagatagggtgtatgcagggggggggacagtgctggaagaaggaagagcaggagccaggaaggaggaggcagattagtagtggaggagcagatggtgtggaagaagagtacagaaaaagggaaaaaaaggcaggAAAAAGAAAGGAAGCTGAAATGCAAGGACTATTAGTGTAATATAATAATATTGTGTAAAAGTATCGA                                                                                                                                                                                                                                                 <  SRR13385771.1116266/67‑1 (MQ=60)
                                               CTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATAC                                                                                                                                                                                                                                              >  SRR13385771.1278036/1‑301 (MQ=60)
                                                   AATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTAATCTATAATAGCAAAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTAATATCACATGGTGGGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTT                                                                                                                                                                                                                                          <  SRR13385771.313648/301‑1 (MQ=60)
                                                    ATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAACGTATCGATACCCTTT                                                                                                                                                                                                                                         >  SRR13385771.1266055/1‑301 (MQ=60)
                                                          CTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACACTTTTTGGA                                                                                                                                                                                                                                    >  SRR13385771.172940/1‑300 (MQ=60)
                                                            TCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAAT                                                                                                                                                                                                                                  <  SRR13385771.185288/300‑1 (MQ=60)
                                                                       TGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTACTATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGACTTATTGTATCTTC                                                                                                                                                                                                                      >  SRR13385771.1867424/1‑301 (MQ=60)
                                                                                 GCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCT                                                                                                                                                                                                            >  SRR13385771.1096992/1‑301 (MQ=60)
                                                                                           TCTTTATGCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGAGGTATGCATTTTGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCGGAAATGCAAGGACTAGTAGTGTAATATAATAATAGTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATA                                                                                                                                                                                                   <  SRR13385771.1539590/300‑1 (MQ=60)
                                                                                              TTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTT                                                                                                                                                                                                <  SRR13385771.1475594/300‑1 (MQ=60)
                                                                                                    TATAATAGCACAGTGACACTCAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAA                                                                                                                                                                                          >  SRR13385771.729834/1‑300 (MQ=60)
                                                                                                            CACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATAT                                                                                                                                                                                 >  SRR13385771.1010733/1‑301 (MQ=60)
                                                                                                                     ACTTAAACGTCAAACTTGGCGCACATTAATATCCGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTTTGTAAAAGTATCGATACCCTTTTTGGAATTATCGTATCTTCGAGGGTGGCTTTTAATATATTTGTGAAAACCTAATATTATAACCTT                                                                                                                                                                        >  SRR13385771.1432325/1‑301 (MQ=60)
                                                                                                                             GTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAAC                                                                                                                                                                 >  SRR13385771.307653/1‑300 (MQ=60)
                                                                                                                                               TAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTT                                                                                                                                              >  SRR13385771.146950/1‑301 (MQ=60)
                                                                                                                                                           TATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTT                                                                                                                                  >  SRR13385771.1628219/1‑301 (MQ=60)
                                                                                                                                                              GCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTAC                                                                                                                                <  SRR13385771.147342/300‑1 (MQ=60)
                                                                                                                                                                ATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCA                                                                                                                             <  SRR13385771.1521602/301‑1 (MQ=60)
                                                                                                                                                                    GGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTC                                                                                                                         <  SRR13385771.945097/301‑1 (MQ=60)
                                                                                                                                                                         GACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTAC                                                                                                                     <  SRR13385771.387594/300‑1 (MQ=60)
                                                                                                                                                                          ACACTGCTGTAATAAGGAACATCATCATCCATCAACTATTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCGGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTGCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACT                                                                                                                    <  SRR13385771.140946/300‑1 (MQ=60)
                                                                                                                                                                           CACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACACTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGACAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTAT                                                                                                                  >  SRR13385771.641917/1‑301 (MQ=60)
                                                                                                                                                                                  GTAATAATGAACATCATCAGCCATCAACGAGTAGTCACATTAGTAGGTTATTATCACATTGTTGGTAAGAACATTACATATAAAGTGAAAAAAAGTCATCTAAAATAAAGTAAGCTGAAATGCAAGGACTAGTAGTGTAATATAGTAATATTGTTTAAAAGTATCTATACCCTTTTTGGAATTATTGTATCTTCGATGGTGTCTTTTAATATTTTTTTGAATATCTAGTATTATAGCCTTTCTCTGCAACGAAATCCCAACTGTTGTGTAATAATTTTACGCAATTCTTACGATTGCTT                                                                                                             <  SRR13385771.1542368/299‑1 (MQ=60)
                                                                                                                                                                                     ATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACC                                                                                                         >  SRR13385771.1723930/1‑300 (MQ=60)
                                                                                                                                                                                       AAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAAT                                                                                                      >  SRR13385771.1359299/1‑301 (MQ=60)
                                                                                                                                                                                              ATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTT                                                                                               >  SRR13385771.92037/1‑301 (MQ=60)
                                                                                                                                                                                                          CAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCA                                                                                   <  SRR13385771.737067/301‑1 (MQ=60)
                                                                                                                                                                                                                GTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGT                                                                             >  SRR13385771.601393/1‑301 (MQ=60)
                                                                                                                                                                                                                GTAGTCACATGAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCGTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGT                                                                             <  SRR13385771.114342/301‑1 (MQ=60)
                                                                                                                                                                                                                     CACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATACAGTTCGCT                                                                        >  SRR13385771.1890157/1‑301 (MQ=60)
                                                                                                                                                                                                                                         ACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTCGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTAT                                                                                                                                                                              >  SRR13385771.1301462/1‑179 (MQ=60)
                                                                                                                                                                                                                                           ATGGTGTGTAAGAACATGACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATAGTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGTTCGCTGACTACTTCTCACGACTCATGT                                                  <  SRR13385771.1022298/301‑1 (MQ=60)
                                                                                                                                                                                                                                              GTGTGTAAGAACATTACATAAAAATTGAAAAAAAGGCATCAAAAGTAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATAGTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGTTCGCTGACTACTTCTCACGACTCATGTCAT                                               <  SRR13385771.1258621/301‑1 (MQ=60)
                                                                                                                                                                                                                                                     AGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGTTCGCTGACTACTTCTCACGACTCATGTCATCTCCTTA                                        <  SRR13385771.1465709/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                  CATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAACACCTAACATCATAACCTTCCACCACCACGAACTCCCCACTGTTCTGTCATAATCTTACTCAATTCTcactactcctctaccaacccttctaattgccctctcataaacccccctgaccacccctccccacccaccccacctcctcccactccatctcataatatcctcctcccac           >  SRR13385771.8103/1‑192 (MQ=60)
                                                                                                                                                                                                                                                                                  CATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGTTCGCTGACTACTTCTCACGTCTCATGTCATCTCCTTATACTGTATATGATAATATACTGGTGGTGA           <  SRR13385771.1475826/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                           AAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGTTCGCTGACTACTTCTCACGACTCATGTCATCTCCTTATACTGTATATGATAATATACTGGTGGTGAATGACAGCA  <  SRR13385771.1299171/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                             
CCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGTATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACGTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCGTCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACGTAAAGATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAACGCAAGGACTAGTAGTGTAATAGAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGTTCGCTGACTACTTCTCACGACTCATGTCATCTCCTTATACTGTATATGATAATATACTGGTGGTGAATGACAGCA  >  BK006934/358905‑359488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑