Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGTATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACGTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCGTCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACGTAAAGATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAACGCAAGGACTAGTAGTGTAATAGAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGTTCGCTGACTACTTCTCACGACTCATGTCATCTCCTTATACTGTATATGATAATATACTGGTGGTGAATGACAGCAAACTCTTTCTGGAAAACT  >  BK006934/358928‑359506
                                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                         
ATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAAT                                                                                                                                                                                                                                                                                        <  SRR13385771.1576090/301‑1 (MQ=60)
   ATCACAGCAACGTTCAATTATCTTCATTTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTTACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAA                                                                                                                                                                                                                                                                                      <  SRR13385771.1686650/300‑1 (MQ=60)
                 CAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTA                                                                                                                                                                                                                                                                       <  SRR13385771.574978/301‑1 (MQ=60)
                     gagctgcaggtgggggtgaggacggaaggaaagagtggcgaacagtgtcgtgatgagataataggagagggaaaggtagacgtgaaagttggcggacatgaagatagggtgtatgcagggggggggacagtgctggaagaaggaagagcaggagccaggaaggaggaggcagattagtagtggaggagcagatggtgtggaagaagagtacagaaaaagggaaaaaaaggcaggAAAAAGAAAGGAAGCTGAAATGCAAGGACTATTAGTGTAATATAATAATATTGTGTAAAAGTATCGA                                                                                                                                                                                                                                                                   <  SRR13385771.1116266/67‑1 (MQ=60)
                        CTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATAC                                                                                                                                                                                                                                                                >  SRR13385771.1278036/1‑301 (MQ=60)
                            AATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTAATCTATAATAGCAAAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTAATATCACATGGTGGGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTT                                                                                                                                                                                                                                                            <  SRR13385771.313648/301‑1 (MQ=60)
                             ATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAACGTATCGATACCCTTT                                                                                                                                                                                                                                                           >  SRR13385771.1266055/1‑301 (MQ=60)
                                   CTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACACTTTTTGGA                                                                                                                                                                                                                                                      >  SRR13385771.172940/1‑300 (MQ=60)
                                     TCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAAT                                                                                                                                                                                                                                                    <  SRR13385771.185288/300‑1 (MQ=60)
                                                TGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTACTATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGACTTATTGTATCTTC                                                                                                                                                                                                                                        >  SRR13385771.1867424/1‑301 (MQ=60)
                                                          GCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCT                                                                                                                                                                                                                              >  SRR13385771.1096992/1‑301 (MQ=60)
                                                                    TCTTTATGCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGAGGTATGCATTTTGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCGGAAATGCAAGGACTAGTAGTGTAATATAATAATAGTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATA                                                                                                                                                                                                                     <  SRR13385771.1539590/300‑1 (MQ=60)
                                                                       TTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTT                                                                                                                                                                                                                  <  SRR13385771.1475594/300‑1 (MQ=60)
                                                                             TATAATAGCACAGTGACACTCAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAA                                                                                                                                                                                                            >  SRR13385771.729834/1‑300 (MQ=60)
                                                                                     CACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATAT                                                                                                                                                                                                   >  SRR13385771.1010733/1‑301 (MQ=60)
                                                                                              ACTTAAACGTCAAACTTGGCGCACATTAATATCCGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTTTGTAAAAGTATCGATACCCTTTTTGGAATTATCGTATCTTCGAGGGTGGCTTTTAATATATTTGTGAAAACCTAATATTATAACCTT                                                                                                                                                                                          >  SRR13385771.1432325/1‑301 (MQ=60)
                                                                                                      GTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAAC                                                                                                                                                                                   >  SRR13385771.307653/1‑300 (MQ=60)
                                                                                                                        TAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTT                                                                                                                                                                >  SRR13385771.146950/1‑301 (MQ=60)
                                                                                                                                    TATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTT                                                                                                                                                    >  SRR13385771.1628219/1‑301 (MQ=60)
                                                                                                                                       GCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTAC                                                                                                                                                  <  SRR13385771.147342/300‑1 (MQ=60)
                                                                                                                                         ATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCA                                                                                                                                               <  SRR13385771.1521602/301‑1 (MQ=60)
                                                                                                                                             GGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTC                                                                                                                                           <  SRR13385771.945097/301‑1 (MQ=60)
                                                                                                                                                  GACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTAC                                                                                                                                       <  SRR13385771.387594/300‑1 (MQ=60)
                                                                                                                                                   ACACTGCTGTAATAAGGAACATCATCATCCATCAACTATTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCGGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTGCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACT                                                                                                                                      <  SRR13385771.140946/300‑1 (MQ=60)
                                                                                                                                                    CACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACACTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGACAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTAT                                                                                                                                    >  SRR13385771.641917/1‑301 (MQ=60)
                                                                                                                                                           GTAATAATGAACATCATCAGCCATCAACGAGTAGTCACATTAGTAGGTTATTATCACATTGTTGGTAAGAACATTACATATAAAGTGAAAAAAAGTCATCTAAAATAAAGTAAGCTGAAATGCAAGGACTAGTAGTGTAATATAGTAATATTGTTTAAAAGTATCTATACCCTTTTTGGAATTATTGTATCTTCGATGGTGTCTTTTAATATTTTTTTGAATATCTAGTATTATAGCCTTTCTCTGCAACGAAATCCCAACTGTTGTGTAATAATTTTACGCAATTCTTACGATTGCTT                                                                                                                               <  SRR13385771.1542368/299‑1 (MQ=60)
                                                                                                                                                              ATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACC                                                                                                                           >  SRR13385771.1723930/1‑300 (MQ=60)
                                                                                                                                                                AAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAAT                                                                                                                        >  SRR13385771.1359299/1‑301 (MQ=60)
                                                                                                                                                                       ATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTT                                                                                                                 >  SRR13385771.92037/1‑301 (MQ=60)
                                                                                                                                                                                   CAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCA                                                                                                     <  SRR13385771.737067/301‑1 (MQ=60)
                                                                                                                                                                                         GTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGT                                                                                               >  SRR13385771.601393/1‑301 (MQ=60)
                                                                                                                                                                                         GTAGTCACATGAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCGTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGT                                                                                               <  SRR13385771.114342/301‑1 (MQ=60)
                                                                                                                                                                                              CACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATACAGTTCGCT                                                                                          >  SRR13385771.1890157/1‑301 (MQ=60)
                                                                                                                                                                                                                  ACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTCGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTAT                                                                                                                                                                                                >  SRR13385771.1301462/1‑179 (MQ=60)
                                                                                                                                                                                                                    ATGGTGTGTAAGAACATGACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATAGTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGTTCGCTGACTACTTCTCACGACTCATGT                                                                    <  SRR13385771.1022298/301‑1 (MQ=60)
                                                                                                                                                                                                                       GTGTGTAAGAACATTACATAAAAATTGAAAAAAAGGCATCAAAAGTAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATAGTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGTTCGCTGACTACTTCTCACGACTCATGTCAT                                                                 <  SRR13385771.1258621/301‑1 (MQ=60)
                                                                                                                                                                                                                              AGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGTTCGCTGACTACTTCTCACGACTCATGTCATCTCCTTA                                                          <  SRR13385771.1465709/301‑1 (MQ=60)
                                                                                                                                                                                                                                                           CATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAACACCTAACATCATAACCTTCCACCACCACGAACTCCCCACTGTTCTGTCATAATCTTACTCAATTCTcactactcctctaccaacccttctaattgccctctcataaacccccctgaccacccctccccacccaccccacctcctcccactccatctcataatatcctcctcccac                             >  SRR13385771.8103/1‑192 (MQ=60)
                                                                                                                                                                                                                                                           CATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGTTCGCTGACTACTTCTCACGTCTCATGTCATCTCCTTATACTGTATATGATAATATACTGGTGGTGA                             <  SRR13385771.1475826/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                    AAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGTTCGCTGACTACTTCTCACGACTCATGTCATCTCCTTATACTGTATATGATAATATACTGGTGGTGAATGACAGCA                    <  SRR13385771.1299171/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                      AAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGTTCGCTGACTACTTCTCACGACTCATGTCATCTCCTTATACTGTATATGATAATATACTGGTGGTGAATGACAGCAAAATCTTTCTGGAAAACT  <  SRR13385771.1145187/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                         
ATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGTATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACGTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCGTCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACGTAAAGATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAACGCAAGGACTAGTAGTGTAATAGAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAACAACGAAATCCCAACTGTTGTGTAATAATTTTACTCAATTCTTACTATTGCTTTACCAATCCTTGTATTTGAGCTCTCATAAAGTTCGCTGACTACTTCTCACGACTCATGTCATCTCCTTATACTGTATATGATAATATACTGGTGGTGAATGACAGCAAACTCTTTCTGGAAAACT  >  BK006934/358928‑359506

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑