Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AAAATGGCTAGAAATAGAACAACCTCCAAGAAAAATGTTCAAAGTAAACGCTTAATAGACAGAGTGGTTCCCATGGACAAGATTAAAAAAGTTGGCGTAGCG‑AAAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGACTGGGGCAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAAGAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTTCTCAGGTGCAGATAGCTCAAATTAGGGTTAGAGACCTGCCTTCAGGATCTGC  >  BK006934/360910‑361505
                                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                            
AAAATGGCTAGAAATAGAACAACCTCCAAGAAAAATGTTCAAAGTAAACGCTTAATAGACAGAGTGGTTCCCATGGACAAGATTAAAAAAGTTGGCGTAGCG‑AAAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGG                                                                                                                                                                                                                                                                                                         <  SRR13385771.1809162/301‑1 (MQ=60)
   ATGGCTAGAAATAGAACAACCGCCAAGAAAAATGTTCAAAGTAAACGCTTAATAGACAGAGTGGTTCCCATGGACAAGATTAAAAAAGTTGGCGTAGCG‑AAAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTA                                                                                                                                                                                                                                                                                                      <  SRR13385771.545180/301‑1 (MQ=60)
         AGAAATAGAACAACCTCCAAGAAAAATGTTCAAAGTAAACGCTTAATAGACAGAGTGGTTCCCATGGACAAGATTAAAAAAGTTGGCGTAGCG‑‑AAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCC                                                                                                                                                                                                                                                                                                <  SRR13385771.399034/300‑1 (MQ=60)
                        TCCAAGAAAAATGTTCAAAGTAAACGCTTAATAGACAGAGTGGTTCCCATGGACAAGATTAAAAAAGTTGGCGTAGCG‑AAAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTACTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGAAT                                                                                                                                                                                                                                                                                 >  SRR13385771.468182/1‑301 (MQ=60)
                           AAGAAAAATGTTCAAAGTAAACGCTTAATAGACAGAGTGGTTCCCATGGACAAGATTAAAAAAGTTGGCGTAGCGAAAAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTTAGCAGCAATGAAGAAGGTGTACTGTTAAGAGAAGCACAGAGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGCAAAAGGGCATACAGAATACTAGGCCCGACAAAGACATAAACAGCAGTCCTAGATGGGGTAATGCCCACAGAGGAACCGAATGG                                                                                                                                                                                                                                                                               >  SRR13385771.825536/1‑301 (MQ=60)
                             GAAAAATGTTCAAAGTAAACGCTTAATAGACAGAGTGGTTCCCATGGACAAGATTAAAAAAGTTGGCGTAGCG‑AAAAAAAAAACGGTAGAACACACTAAAGAAGGATTTAGGGTTGTCAAGGGTAAGCTAGTAAGAAGCAATGACGTCGGTGAACTGTAAAGAGAAGCACAGGGTGCTATGGAAAAAAGAACAAATGTTTCCAAAAGAAATAGGAAAACGGGAATAAAGAATAATAGGCCCACCAAAGACAAAAACAGAAGTCCGGGCTGGGGTAATGCCAACAGAGGAACCGATTGGCA                                                                                                                                                                                                                                                                             >  SRR13385771.784255/1‑300 (MQ=60)
                                   TGTTCAAAGTAAACGCTTAATAGACAGAGTGGTTCCCATGGACAAGATTAAAAAAGTTGGCGTAGCG‑AAAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATACTAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGCGTAATCCCCACAGACGAACCGATTGGCAGAGCGA                                                                                                                                                                                                                                                                       >  SRR13385771.1322276/1‑300 (MQ=60)
                                      gggaaagtaaacgctgagtatgcggagtggttgcaatggacaagtggagagaaggtgtcgtggcgaaaatgaaaaccgtagagctgtctagaggaggatgtatCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGTTGCTATCGATAAAAGAACTAATGTTTCCCAAATAAATAGGAAAAAGGGAATAAAGAATAATAGTCCCCACAAAGACGTAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGATGAACCGATTGGCAGAGCGAAAA                                                                                                                                                                                                                                                                    <  SRR13385771.117128/198‑1 (MQ=60)
                                      ACAAAGTAAACGCTTAATAGACAGATTGGTTCCCATGGAAAAGATTAAAAAAGTTGGCGTAGCA‑AAAAAAAAAACCGTAGAACACACGAAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAA                                                                                                                                                                                                                                                                   <  SRR13385771.1272586/301‑1 (MQ=60)
                                                 GCTTAATAGACAGAGTGGTTCACATGGACAAGATTAAAAAAGTTGGCGTAGCG‑AAAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGCATTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTCCTGTTAAGAGAAGCACAGGGTGATATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAACGGGAATAACGAATAATAGGCCCCACAAAGACATAAAAAGCAGTCCTGGCTAGGGTAATGCCCCAAGAGGAACCGCTTGGCAGAGCGAAAAAGCAAACGGCAT                                                                                                                                                                                                                                                        >  SRR13385771.1358289/1‑301 (MQ=60)
                                                  CTTAATAGACAGAGTGGTTCCCATGGACAAGATTAAAAAAGTTGGCGTAGCG‑AAAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGAGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATAGAAAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAAAAAAGCATAATAGGCACCCCAAAGACATAAACAGCAGTCATGACAGAGGAAATGCCAACAAAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATG                                                                                                                                                                                                                                                       >  SRR13385771.1146518/1‑301 (MQ=60)
                                                              AGTGGTTCCCATGGACAAGATTAAAAAAGTTGGCGTAGCG‑AAAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGAATGGAAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAA                                                                                                                                                                                                                                            >  SRR13385771.251354/1‑300 (MQ=60)
                                                                                            TGGCGTAGCG‑AAAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACCCCCGGAATTTTA                                                                                                                                                                                                                           >  SRR13385771.1182684/1‑287 (MQ=60)
                                                                                                   aagcAAAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGGAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTGGCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAG                                                                                                                                                                                                       <  SRR13385771.1653318/297‑1 (MQ=60)
                                                                                                           AAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAAC                                                                                                                                                                                                >  SRR13385771.1833095/1‑300 (MQ=60)
                                                                                                                            ACTAAAGAAGGATGTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTAAAACGAAGATTAAATTGCAGCGAAAACATTTTGGCGAAGAAATAC                                                                                                                                                                              <  SRR13385771.483772/301‑1 (MQ=60)
                                                                                                                               AAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATCAAATTGCAGCGACAACATTTTGGCGAAGTAATACA                                                                                                                                                                             >  SRR13385771.313222/1‑299 (MQ=60)
                                                                                                                                     GGATTGAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTAATGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCAAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGAGGTAATGACCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCA                                                                                                                                                                     <  SRR13385771.475486/301‑1 (MQ=60)
                                                                                                                                       GTTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTAGCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGC                                                                                                                                                                   <  SRR13385771.934279/301‑1 (MQ=60)
                                                                                                                                       ATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACCACATTTTGGCGAAGAAATACAAGGTGGCAGC                                                                                                                                                                   >  SRR13385771.47264/1‑301 (MQ=60)
                                                                                                                                       ATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGC                                                                                                                                                                   <  SRR13385771.1485532/301‑1 (MQ=60)
                                                                                                                                                    AACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATAT                                                                                                                                                      <  SRR13385771.913220/301‑1 (MQ=60)
                                                                                                                                                     ACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCA                                                                                                                                                                                                        <  SRR13385771.206879/250‑1 (MQ=60)
                                                                                                                                                                   AGCAGCAATGACGTCGGTGTACTGGTAAGAGAAGCACAGTGTGATATCGATAAAAGAACTAATGTGTGCCAAAGAAAGAGGATAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCGGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGAGTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATATTGGCGAAGAAAGACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATG                                                                                                                                       <  SRR13385771.1660738/301‑1 (MQ=60)
                                                                                                                                                                                      TACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAAT                                                                                                                    >  SRR13385771.537912/1‑301 (MQ=60)
                                                                                                                                                                                          GTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTA                                                                                                                <  SRR13385771.1527445/301‑1 (MQ=60)
                                                                                                                                                                                                 GAAGCACAGGGTGCTATCGATAAAAGAACTAATTTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTTGCTGGTGTAATTCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACC                                                                                                         <  SRR13385771.1818364/301‑1 (MQ=60)
                                                                                                                                                                                                        AGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTT                                                                                                  <  SRR13385771.1369590/301‑1 (MQ=60)
                                                                                                                                                                                                          GGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGG                                                                                                >  SRR13385771.1458207/1‑301 (MQ=60)
                                                                                                                                                                                                                        AAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGA                                                                                   >  SRR13385771.457394/1‑300 (MQ=60)
                                                                                                                                                                                                                        AAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGA                                                                                   >  SRR13385771.1697146/1‑300 (MQ=60)
                                                                                                                                                                                                                              AAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCTCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTG                                                                            <  SRR13385771.907112/301‑1 (MQ=60)
                                                                                                                                                                                                                               AATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAATCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTG                                                                            <  SRR13385771.1235444/300‑1 (MQ=60)
                                                                                                                                                                                                                                              gatatGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAA                                                            <  SRR13385771.240643/296‑1 (MQ=60)
                                                                                                                                                                                                                                                      AAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTTCT                                                    >  SRR13385771.507857/1‑301 (MQ=60)
                                                                                                                                                                                                                                                       AAGGGAATAAAGAATAATATGCCCCACAAATACATAAACAGCAGTCCGGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAATCAAACGGCATTAACAGGGCCAATAACTCTCGGATTTTTACCACTATTATTAAATTGCAGCGACAACATGTTGGCGAAGAAATACAAGGTGTCAGCCAGCTTGTGATATCTACAATTT                                                                                                                                             <  SRR13385771.1787793/211‑1 (MQ=60)
                                                                                                                                                                                                                                                                                      ACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGCGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTACATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGATATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTTCTCAGGTGCAGATAGCTCAACTTAGGGTTAG                       >  SRR13385771.982616/1‑298 (MQ=60)
                                                                                                                                                                                                                                                                                          AAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGACGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTTCTCAGGTGCAGCTAGCTCAAATTAGGGTTAGAGACCTG                >  SRR13385771.394207/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                                    CCTGGCTTGGGTAATTCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACTACATTTTGGCGAAGAAATACAGGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTGCTCATGTGCAGATAGCTCAAATTAGTGTTAGATACCTGCCTTCAGGA       <  SRR13385771.482101/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                       GGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGCAAAAGCAACCGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATCTTGGCGAAGACATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGCAAACATTTCTCAGGTGCAGATCGCTCACATTAGGGTTAGAGACCTGCCTTCAGGATCTG   >  SRR13385771.1472667/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                                        GCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTTCTCAGGTGCAGATAGCTCAAATTAGGGTTAGAGACCTGCCTTCAGGATCTGC  <  SRR13385771.1187354/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                            
AAAATGGCTAGAAATAGAACAACCTCCAAGAAAAATGTTCAAAGTAAACGCTTAATAGACAGAGTGGTTCCCATGGACAAGATTAAAAAAGTTGGCGTAGCG‑AAAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGACTGGGGCAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAAGAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTTCTCAGGTGCAGATAGCTCAAATTAGGGTTAGAGACCTGCCTTCAGGATCTGC  >  BK006934/360910‑361505

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑