Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGGCGTAGCGAAAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGACTGGGGCAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAAGAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTTCTCAGGTGCAGATAGCTCAAATTAGGGTTAGAGACCTGCCTTCAGGATCTGCCACCGCTAAGGTCCGTCTGGCATATCCTACAACACAGTCTTTGGAGAAGGTAAGAAAACTGTTCCA  >  BK006934/361002‑361571
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                                           
TGGCGTAGCGAAAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACCCCCGGAATTTTA                                                                                                                                                                                                                                                                                             >  SRR13385771.1182684/1‑287 (MQ=60)
      aagcAAAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGGAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTGGCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAG                                                                                                                                                                                                                                                                         <  SRR13385771.1653318/297‑1 (MQ=60)
              AAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAAC                                                                                                                                                                                                                                                                  >  SRR13385771.1833095/1‑300 (MQ=60)
                               ACTAAAGAAGGATGTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTAAAACGAAGATTAAATTGCAGCGAAAACATTTTGGCGAAGAAATAC                                                                                                                                                                                                                                                <  SRR13385771.483772/301‑1 (MQ=60)
                                  AAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATCAAATTGCAGCGACAACATTTTGGCGAAGTAATACA                                                                                                                                                                                                                                               >  SRR13385771.313222/1‑299 (MQ=60)
                                        GGATTGAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTAATGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCAAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGAGGTAATGACCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCA                                                                                                                                                                                                                                       <  SRR13385771.475486/301‑1 (MQ=60)
                                          GTTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTAGCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGC                                                                                                                                                                                                                                     <  SRR13385771.934279/301‑1 (MQ=60)
                                          ATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACCACATTTTGGCGAAGAAATACAAGGTGGCAGC                                                                                                                                                                                                                                     >  SRR13385771.47264/1‑301 (MQ=60)
                                          ATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGC                                                                                                                                                                                                                                     <  SRR13385771.1485532/301‑1 (MQ=60)
                                                       AACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATAT                                                                                                                                                                                                                        <  SRR13385771.913220/301‑1 (MQ=60)
                                                        ACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCA                                                                                                                                                                                                                                                                          <  SRR13385771.206879/250‑1 (MQ=60)
                                                                      AGCAGCAATGACGTCGGTGTACTGGTAAGAGAAGCACAGTGTGATATCGATAAAAGAACTAATGTGTGCCAAAGAAAGAGGATAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCGGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGAGTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATATTGGCGAAGAAAGACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATG                                                                                                                                                                                                         <  SRR13385771.1660738/301‑1 (MQ=60)
                                                                                         TACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAAT                                                                                                                                                                                      >  SRR13385771.537912/1‑301 (MQ=60)
                                                                                             GTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTA                                                                                                                                                                                  <  SRR13385771.1527445/301‑1 (MQ=60)
                                                                                                    GAAGCACAGGGTGCTATCGATAAAAGAACTAATTTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTTGCTGGTGTAATTCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACC                                                                                                                                                                           <  SRR13385771.1818364/301‑1 (MQ=60)
                                                                                                           AGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTT                                                                                                                                                                    <  SRR13385771.1369590/301‑1 (MQ=60)
                                                                                                             GGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGG                                                                                                                                                                  >  SRR13385771.1458207/1‑301 (MQ=60)
                                                                                                                           AAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGA                                                                                                                                                     >  SRR13385771.1697146/1‑300 (MQ=60)
                                                                                                                           AAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGA                                                                                                                                                     >  SRR13385771.457394/1‑300 (MQ=60)
                                                                                                                                 AAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCTCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTG                                                                                                                                              <  SRR13385771.907112/301‑1 (MQ=60)
                                                                                                                                  AATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAATCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTG                                                                                                                                              <  SRR13385771.1235444/300‑1 (MQ=60)
                                                                                                                                                 gatatGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAA                                                                                                                              <  SRR13385771.240643/296‑1 (MQ=60)
                                                                                                                                                         AAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTTCT                                                                                                                      >  SRR13385771.507857/1‑301 (MQ=60)
                                                                                                                                                          AAGGGAATAAAGAATAATATGCCCCACAAATACATAAACAGCAGTCCGGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAATCAAACGGCATTAACAGGGCCAATAACTCTCGGATTTTTACCACTATTATTAAATTGCAGCGACAACATGTTGGCGAAGAAATACAAGGTGTCAGCCAGCTTGTGATATCTACAATTT                                                                                                                                                                                                               <  SRR13385771.1787793/211‑1 (MQ=60)
                                                                                                                                                                                         ACATAAACAGCAGTCCTGGCTGGGGTAATGCCCACAGCGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTACATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGATATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTTCTCAGGTGCAGATAGCTCAACTTAGGGTTAG                                                                                         >  SRR13385771.982616/1‑298 (MQ=60)
                                                                                                                                                                                             AAACAGCAGTCCTGGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGACGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTTCTCAGGTGCAGCTAGCTCAAATTAGGGTTAGAGACCTG                                                                                  >  SRR13385771.394207/1‑301 (MQ=60)
                                                                                                                                                                                                       CCTGGCTTGGGTAATTCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACTACATTTTGGCGAAGAAATACAGGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTGCTCATGTGCAGATAGCTCAAATTAGTGTTAGATACCTGCCTTCAGGA                                                                         <  SRR13385771.482101/300‑1 (MQ=60)
                                                                                                                                                                                                          GGCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGCAAAAGCAACCGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATCTTGGCGAAGACATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGCAAACATTTCTCAGGTGCAGATCGCTCACATTAGGGTTAGAGACCTGCCTTCAGGATCTG                                                                     >  SRR13385771.1472667/1‑301 (MQ=60)
                                                                                                                                                                                                           GCTGGGGTAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTTCTCAGGTGCAGATAGCTCAAATTAGGGTTAGAGACCTGCCTTCAGGATCTGC                                                                    <  SRR13385771.1187354/301‑1 (MQ=60)
                                                                                                                                                                                                                         CACAGAGGAACCGATTGGCAGAGCGAAAAATCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTTCTCAGGTGCAGATAGCTCAAATTAGGGTTAGAGACCTGCCTTCAGGATCTGCCACCGCTAAGGTCC                                                      <  SRR13385771.1888538/301‑1 (MQ=60)
                                                                                                                                                                                                                             GAGGAACCGATTGGCAGAGCGAAAAAGCAAACTGCATGAACATGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTTCTCAGGTGCAGATAGCTCAAATTAGGGTTAGAGACCTGCCTTCAGGATCTGCCACCGCTAAGGTCCGTCT                                                  <  SRR13385771.1539836/301‑1 (MQ=60)
                                                                                                                                                                                                                             GAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTA                                                                                                                                                                         <  SRR13385771.1415551/182‑1 (MQ=60)
                                                                                                                                                                                                                                                                      AGGGCCAATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTTCTCAGGTGCAGATAGCTCAAATTAGGGTTAGAGACCTGCCTTCAGGATCTGCCACCGCTAAGGTCCGTCTGGCATATCCTACAACACAGTCTTGGGAGAAGGTAAGAAAAC         >  SRR13385771.358850/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                             ATAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTTCTCAGGTGCAGATAGCTCAAATTAGGGTTAGAGACCTGCCTTCAGGATCTGCCACCGCTAAGGTCCGTCTGGCATATCCTACAACACAGTCTTTGGAGAAGGTAAGAAAACTGTTCCA  <  SRR13385771.48838/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                                           
TGGCGTAGCGAAAAAAAAAACCGTAGAACACACTAAAGAAGGATTTAGCGTTGTCAACGGTAAGCTAGTAAGCAGCAATGACGTCGGTGTACTGTTAAGAGAAGCACAGGGTGCTATCGATAAAAGAACTAATGTTTCCCAAAGAAATAGGAAAAAGGGAATAAAGAATAATAGGCCCCACAAAGACATAAACAGCAGTCCTGACTGGGGCAATGCCCACAGAGGAACCGATTGGCAGAGCGAAAAAGCAAACGGCATGAACAGGGCCAAGAACTCTCGGAATTTTACCACTAATATTAAATTGCAGCGACAACATTTTGGCGAAGAAATACAAGGTGGCAGCCAGCTTGTGATATCTACAAATTCAGATGCTTCAGATAAATTGTTAATGCTATTCAACCTAACTTTGGGAGTAAACCAAGAAAACTTGAAAAATGTTCTGGAAAACATTTCTCAGGTGCAGATAGCTCAAATTAGGGTTAGAGACCTGCCTTCAGGATCTGCCACCGCTAAGGTCCGTCTGGCATATCCTACAACACAGTCTTTGGAGAAGGTAAGAAAACTGTTCCA  >  BK006934/361002‑361571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑