Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
6081 |
0.0 |
0 |
0.0% |
0 |
0.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATGAATCGTCCCACTTGTCGTATTAGAGTTTGTCAACGACACTCACAAGGTATTTAATCAGCAAAATCCCCGCCACAAACTATTTTTTTGAAGACATGCTTTCTCATGACTGCCTAATAACAATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑ATTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCCAAACAAAGGGTCTTTCGTTAGCAAACCTAGAAATCTGCAAAAAATGTCTTCGGAACCATTTAAGAACGTCTACTTGCTACCTCAAACAAACCAATTGCTGGGTTTGTACACCATCATCAGAAATAAGAATACAACTAG > BK006934/361618‑362209
|
GATGAATCGTCCCACTTGTCGTATTAGAGTTTGTCAACGACACTCACAAGGTATTTAATCAGCAAAATCCCCGCCACAAACTATTTTTTTGAAGACATGCTTTCTCATGACTGCCTAATAACAATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTT > SRR13385771.1339083/1‑301 (MQ=60)
CGTCCCACTTGTCGTAGTAAAGTTTGTCAACGACACTCACAATGTATTTAAGCAGCAAAAGCCCCGCCACAAACTATTGGTTGGAAGACATGCTTTCTCTTTACTTCCTAAGAACAATACCGCATTCTACTAGT‑AATCGACCTATTTAATTATTTCATTAACTATGAAGCAGGTCATTGCAATAATAGAAATGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGGAATTATCTCCGGCGGACGTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCA < SRR13385771.823059/301‑1 (MQ=60)
CCATTTGTCGTATTAGAGTTTGTCAACGACACTCACAAGGTATTTAATCAACAAAATCCCCGCCACAAACTATTTTTTTGAAGACATGCTTTCTCATGACTGCCTAATAACAATACCTCATTCTTCTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGTTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTC < SRR13385771.301413/301‑1 (MQ=60)
CGTATTAGAGTTTGTCAACGACACTCACAAGGTATTTAATCAGCAAAATCCCCGCCACAAACTATTTTTTTGAAGACATGCTTTCTCATGACTGCCTAATAACAATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTC > SRR13385771.357666/1‑300 (MQ=60)
cgttgtcttttcctttcttatttaaccgccatAATCCCCGCCACAGACTATTTTTTTGAAGACATGCTTTCTCATGACTGCCTAATAACAATACCTCTTTCTACTAGT‑AATCGGCCTATGTAATTATTTCATAAACTATTAGGCAGGTCATTGCAATAACAGAAAGGCCTGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTTTAATTATCTCCGGCGTACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TGTTTTTTCACTTCTTCTTTCAATGCTGCCTCAAA < SRR13385771.488710/268‑1 (MQ=60)
ACAACGACACTCACAAGTTATTTAATCAGCAAAATCCCCGCCACAAACTATTTTTTTGAAGACATGCTTTCTCATGACTGCCTAATAACAATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAAGTCATTGCAATAACAGAAATGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAA < SRR13385771.421189/301‑1 (MQ=60)
ACTCACAAGGTATTTAATCAGCAAAATCCCCGCCACAAACTATTTTTTTGAAGACATGCTTTCTCATGACTGCCTAATAACAATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGCCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAACAGAGATAT > SRR13385771.1698781/1‑300 (MQ=60)
AGGTATTTAATAAGCAAAATCCCCGCCACAAACTATTTTTTTGAAGACATGCTTTCTCATGACTTCCTAATAACAATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTG < SRR13385771.1131444/301‑1 (MQ=60)
GTATTTAATCAGCAAAATCCCCGCCACAAACTATTTTTTTGAAGACATGCTTTCTCATGACTGCCTAATAACAATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAC‑TTTTTT‑TTTTTTTTTCCTTTTTTTTTCAAAGCTCCCTCAAAAacgttttttttttttgt > SRR13385771.1142166/1‑284 (MQ=60)
ATTTAATCAGCAAAATCCCCGCCACAAACTATTTTTTTGAAGACATGCTTTCTCATGACTGCCTAATAACAATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAATCTGCCTCAAAAGAGATATATATATTGGTA > SRR13385771.1889529/1‑300 (MQ=60)
CAGCAAAATCCCCGCCACAAACTATTTTTTTGAAGACATGCTTTCTCATGACTGCCTAATAACAATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATACACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTAATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCCAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCACAGCTGCCTCAAAAGCGCTATATATCTTGGTAAGAATCCC > SRR13385771.1217550/1‑301 (MQ=60)
GCAAAATCCCCGCCACAAACTATTTTTTTGAAGACATGCTTTCTCATGACTGCCTAATAACAATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCT > SRR13385771.551574/1‑301 (MQ=60)
acaaaaccccgactacaaataaTTTTTTGAAGACATGCTTTCTCAAGACTTCCTAAATACCATACCATAATCTAATAGTAAATCGA‑CTATGTAATTATTTCATAAAATATAAAGCAAGTCATTTCAATAACAGAAAAGCCGGTTTTTCTTTAAGCTTATGTCAACGCATAAAAAATCGACAGTTTTTATTTTCTCCTGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTT < SRR13385771.1751258/279‑1 (MQ=60)
AAATCCCCGCCACAAACTATTTTTTTGAATACATGCTTTGTCATGACTGCCTAATAACAATACCTCATTCTACTAGT‑AATCGACCTATTTAATTATTTCATAAACTATAAAGCAGGTCATGGCAATAACAGAAAGGCCGGTTTTTCTATAATCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCC < SRR13385771.1628299/301‑1 (MQ=60)
ATCCCCGCCACAAACTATTTTTTTTAATACATGCTTTCTAATGACTGCCTAATAACAATACCTCATTCTACTATA‑AATCGACCTATGTAATTATTTCATAAACTATAAATCAGGTCATTGCAATAACAGAAAGGCCGGTTTTGCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATTTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTC‑AA‑ATTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAAT < SRR13385771.1265627/301‑1 (MQ=60)
CCCCGCCACAAACTATTTTTTTGAAGACATGCTTTCTCATGACTGCCTAATAACAATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGCCTTTTCACTTTACGTCTTTTTTTTCCAA‑TTTTTT‑TTTTTTTTACCTTCTTCTTTCAAAGCTGCCTCACACGAGATCTATATATTGGTAAGACTCCTCTTCCAAT > SRR13385771.982113/1‑300 (MQ=60)
ACAAACTATTTTTTTGAAGACATGCTTTCTCATGACTGCCTAATAACAATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAAAATCCTCTTCCAcaactacctt > SRR13385771.997987/1‑291 (MQ=60)
CAAACTATTTTTTTGAAGACATGCTTTCTCATTACTGCCCTATAACAATAACTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTACCGTCTTTTTTTTCAAATTTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTT < SRR13385771.1821831/301‑1 (MQ=60)
TTGAAGACATGCTTTCTCATTACTGCCGAATAACACTACCTCATTCTAGTAGT‑AATCGACCTATTTAATTATTTCATAAACTAAAAAGCAGGTCATTGCAATAACAGAAAGTCCGTGTTTTCTATAAGCTTATCTCATCGGATAAAAAATCGACAGTTGTAATTAGCGCCGGCGGACTTTTCCCTTTCCGGCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTG < SRR13385771.347900/300‑1 (MQ=60)
CATGACTGTCTTATAACAATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAATCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTC‑AA‑ATTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTA < SRR13385771.639943/298‑1 (MQ=60)
CATGACTGCCTAATAACAATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAG > SRR13385771.604041/1‑218 (MQ=60)
GACTGACTAATAATAATACCTAATTCTACTAGT‑AATCGTCCTATGTAATTATTTCATTAACTATAAAGCAGGTCATTGCAATAACAGAAATGACGGTTTTTCTATAAGCTTATCTCATCGCATATAAATTCGATAGTTGTAATTATCTCCTGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTATCTTCATTTCTTCTTGAACCATGAACCCGTTATTCT < SRR13385771.1696948/300‑1 (MQ=60)
ACAATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCT < SRR13385771.603279/255‑1 (MQ=60)
AATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCTT > SRR13385771.1328653/1‑301 (MQ=60)
CTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCCTTGCAATAACAGAAAGGTCGGTTTTTCTATAAGCTTATCTCATCGCATAACAATTCGACAGTTGTAATTATCTACGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAT‑TTTTTT‑TTTTTTTTCACTTCTTTTTTCATCTCTGCCTCTAACATGACATATATATTGGTAAGAATCATCTTCCAATACTCGATTAGTTTCTTCTTGTTCCATAAACCTGTCATTCTTTTTGTATTCTCCATTCTTtcatcatact > SRR13385771.752138/1‑291 (MQ=60)
AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTCTAAGCTTATATCATCGCATAAAAACTCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCTCCTCTTCTTTCAAAGATGCCTCAAACGCGATATATATATTGGTAAGAATCCTCTTCCCATACTAGCTTCATTTATTCTTGAACCATGAACCCGTCCTTCTTTTTGGCTTCTCCATTCTTGTCACTTACATATCT > SRR13385771.1172508/1‑301 (MQ=60)
AATCGACCTATGTAATTATTTCATAAACTAAAAAGCAGGTCATTGCAATAACAGAAAGTCCCGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTTTAATTATCTCCCGCTGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATC < SRR13385771.391989/300‑1 (MQ=60)
acactaaagcatagcaaTGCAATAAAAGAAACGCCGGTTTTGCTATAAGCTAATCTCCACGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCCAAACAAAGGGTCTT < SRR13385771.1750803/284‑1 (MQ=60)
GTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATTAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCAAAACAAAGGGTCTTTCGTTAGCAAA > SRR13385771.1108788/1‑300 (MQ=60)
TCATTGCATTAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTTTAATTATCTCCGGCTGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCCAAACAAAGGGTCTTTCGTTAGCAAAC < SRR13385771.1060819/300‑1 (MQ=60)
caaagaccgcaagtcatgttttgttgttgctgtattcaaatccagaaaaaagtggaatttggtagtatttgcgggtgtcgtttcccctgtccgCTTTTTTTTTAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCCAAACAAAGGGTCTTTCGTTAGCAAACCTAGAAA < SRR13385771.856589/208‑1 (MQ=60)
CAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTC‑AA‑ATTTTT‑TTTTTTTTCTCTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCCAAACAAAGGGTCTTTCGTTAGCAAACCTAGAAATATGCA > SRR13385771.965220/1‑300 (MQ=60)
AAAGGACGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATAGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTACCTTCTTCTTTAAAAGTTGCCTCAAAAGAGATATATATATTGGTCAGCATCCTCTTACAATACTAGCTTCATTTCTTTTTGAACCATAAACACGTTATTCTTTTTGGCTTCTCCATTCTTTTCCCTTACATATCTTATATATTATCCAAACAAAGGGTCTTTCGTTAGCAAAACTACAAATCTGCAAA > SRR13385771.543467/1‑300 (MQ=60)
GGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATCTATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTCCATATCTTATATATTATCCAAACAAAGGGTCTTTCGTTAGCAAACCTCGAAATATGCAAAAAAT > SRR13385771.81019/1‑301 (MQ=60)
gcttttgttatatacgccTATCTCATCGCATAAAAAATCTTCAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCTTC‑TTTTTTTCCAA‑TTTTTT‑TTTTTTTTCACTTCGTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCGTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCCAAACAAAGGGTCTTTCGTTAGCAAACCTAGAAATCTGCAAAAAATGTC < SRR13385771.698149/283‑1 (MQ=60)
TTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCCAAACAAAGGGTCTTTCGTTAGCAAACCTAGAAATCTGCAAAAAATGTCTTC > SRR13385771.1866431/1‑301 (MQ=60)
AGCTTATTTCATCGGATAAAAGATCGACATTTTTAATTCTCTCCGGCGTGATTTTCCATTTTCTTCTTTTTTTTCTAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCAGTTGTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCCAAACAAAGTGTCGTTCGTTAGCAATCCGAGATATCTGCAAAAAATGTCTTCGGAACCATTT < SRR13385771.1429538/301‑1 (MQ=60)
ACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAATCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTTTACCTTACATATCTTATATATTATCCAAACAAAGGGTCTTTCGTTAGCAAACCTATAAATCTTCAAAAAAGTTCTTCGGAACCATTTAATAACGGCGACTTTCTACCTCAAA > SRR13385771.363489/1‑300 (MQ=60)
CAGTTGTAATTATCTCCGGCGGACTTTGCCCTTTCCGTCTTTTTTTTCAAA‑TTTTTG‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCCAAACAAAGGGTCTTTCGTTAGCAAACCTAGAAATCTGCAAAAAATGTCTTCGGAACCATTTAATAACGTCTACTTGCTACCTCAAACA < SRR13385771.1166/301‑1 (MQ=60)
TAATTATCTCCGGCGGACTTTTCCCTTTCCTTCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTGTCAAAGCTGCCTCAAAAATGATATATATATTGGTAAAAATCCTCTCCCAATACTAGCTTCATTTCTTCTTTAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTTTTTTACCTTACATTGCTTATATTTTATCCAAACAAAGGGTCGTTCTTTATCAAACCTAGAAATCTTCAAAAAATTTCTACTGACCCATTCAAGCACGCCTACTTGCTACCTCAAACAAACCAC > SRR13385771.263632/1‑301 (MQ=60)
TCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAATTTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCCAAACAAAGGGTCTTTCGTTAGCAAACCTAGAAAACTGAAAAAAATGTCT > SRR13385771.612769/1‑249 (MQ=60)
CCCTTTCCGTCTTTTTTTTC‑AA‑ATTTTT‑TTTTTTTTCAATTCTTCTTTCCAAGCTGCCTCAAAAGAGAACTTTATATTGGTAAGAATCCTCTTCCAATACTAGATTCATTTCTTTTTGAACCATGAACCCGTTACTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCCAAACAAAGGGTATTTCGTTAGCAAACCTAGAAATCTGCAAAAAATGCTTTCGGAACCATTTAAGACCGTCTACTTGCTACCTCAAACAAACCCATTGATGGGTTTctaaacactcat > SRR13385771.1645891/1‑289 (MQ=60)
CCTTTCCTGCTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCCAAACAAAGGGTCTTTCGTTAGCAAACCTAGAAATCTGCAAAAAATGTCTTCGGAACCATTTAAGAACGTCTACTTGCTACCTCAAACAAACCAATTGCTGGGTTTGTACACCATCAT < SRR13385771.446916/301‑1 (MQ=60)
CTTTTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAACAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCCTTATTCTTTTTGGCTTCTCCCTTCTTTTACCTTACATATCTTATATATTATCCAACCAAAGGGCCTTTCGTTCCCAAACCCAGAAATCCGCAAAAAATGACTTCGGACCCCTTTAACAACGTCCACCTTCAACCTCAAACAAACCACTTCCTGGGCTCCTACACCATCATCAGAAATA > SRR13385771.863218/1‑300 (MQ=60)
TTTTTTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCCAAACAAAGGGTCTTTCGTTAGCAAACCTAGAAATCTGCAAAAAATGTCTTCGGAACCATTTAAGAACGTCTACTTGCTACCTCAAACAAACCAATTGCTGGGTTTGTACACCATCATCAGAAATAAGA < SRR13385771.1541118/300‑1 (MQ=60)
TTCAAA‑TTTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCCAAACAAAGTGTCTTTCGTTAGCAAACCTAGAAATCTGCAAAAAATGTCTTCGGAACCATTTAAGAACGTCTACTTGCTACCTCAAACAAACCAATTGCTGGGTTTGTACACCATCATCAGAAATAAGAATAC < SRR13385771.320291/300‑1 (MQ=60)
TTCAAA‑TTTTTT‑TTTTTTTTACCTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCCTTATTCTTTTTGGCTTCTCCATTATTGTACCTTACATATCTTATATATTATCCAACCAAAGGGTCTTTCGTTAGCACACCTAGAAATATGCAAAAAATGTCTTCGGAACCATTTAAGAACGTCTCCTTGCTACCTCAAACAAACCAATTGCTGGGTTTGTACACCATCCACAAAAATAAGAATAC > SRR13385771.1504880/1‑300 (MQ=60)
ATTTTTATTTTTTTTCACGTCTTCGTTCAAAGCGGCCGCAAAAGATATATATATATTAGTAAGAAGCCTCTTCCAATACTAGCTTCATTTCGTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCCAAACAAAGGGTCTTTCGTTAGCAAACCTAGAAAGCTGCAAAAAATGTCTTCGGAACCATTTAAGAACGTCTACTTGCTACCTCAAACAAACCAATTTCTGGGTTTGTACACCATCATCATAAATAAGAATACAACTAG < SRR13385771.109163/301‑1 (MQ=60)
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GATGAATCGTCCCACTTGTCGTATTAGAGTTTGTCAACGACACTCACAAGGTATTTAATCAGCAAAATCCCCGCCACAAACTATTTTTTTGAAGACATGCTTTCTCATGACTGCCTAATAACAATACCTCATTCTACTAGT‑AATCGACCTATGTAATTATTTCATAAACTATAAAGCAGGTCATTGCAATAACAGAAAGGCCGGTTTTTCTATAAGCTTATCTCATCGCATAAAAAATCGACAGTTGTAATTATCTCCGGCGGACTTTTCCCTTTCCGTCTTTTTTTTCAAA‑ATTTTT‑TTTTTTTTCACTTCTTCTTTCAAAGCTGCCTCAAAAGAGATATATATATTGGTAAGAATCCTCTTCCAATACTAGCTTCATTTCTTCTTGAACCATGAACCCGTTATTCTTTTTGGCTTCTCCATTCTTGTACCTTACATATCTTATATATTATCCAAACAAAGGGTCTTTCGTTAGCAAACCTAGAAATCTGCAAAAAATGTCTTCGGAACCATTTAAGAACGTCTACTTGCTACCTCAAACAAACCAATTGCTGGGTTTGTACACCATCATCAGAAATAAGAATACAACTAG > BK006934/361618‑362209
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
