Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATTGAACGCCCCTATGGGAACACTTAATTGAATAAATATCTGCCCAACTTGCTGAACATCAAAAACCCAAAAAAATAGAAATCTATAAAATACAACGCCAGTGACAACTGCGAGAAACATTGTGAGCAAGTGAACGCACTAAGGGCACCAATTACTAGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGCACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGCGACGATCTTGTTCTTAATTTCTATACCATGCTTTAAAAAGGATACGATATCTCCCTTTGCCAATTGGTCATTATCAAACAAACATTCTGATATCATGGGGAAGAGTATTCCTGCTATGAATAGAATAAAAA  >  BK006934/370699‑371287
                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                  
ATTGAACGCCCCTATGGGAACACTTAATTGAATAAATATCTGCCCAACTTGCTGAACATCAAAAACCCAAAAAAATAGAAATCTATAAAATACAACGCCAGTGACAACTGCGAGAAACATTGTGAGCAAGTGAACGCACTAAGGGCACCAATTACTAGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACACTGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCACAAAAGAGTATTGGAAC                                                                                                                                                                                                                                                                                                  >  SRR13385771.1656996/1‑301 (MQ=60)
    AACGCCCCTATGGGAACACTTAATTGAATAAATATCTGCCCAACTTGCTGAACATCAAAAACCCAAAAAAATAGAAATCTATAAAATACAACGCCAGTGACAACTGCGAGAAACATTGTGAGCAAGTGAACGCACTAAGGGCACCAATTACTAGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCT                                                                                                                                                                                                                                                                                              <  SRR13385771.1667451/301‑1 (MQ=60)
                          ATTGAATAAATATCTGCCCAACTTGCTGAACATCAAAAACCCAAAAAAATAGAAATCTATAAAATACAACGCCAGTGACAACTGCGAGAAACATTGTGAGCAAGTGAACGCACTAAGGGCACCAATTACTAGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTGAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACAACTAATAAATGATCCTAGGGTGTGT                                                                                                                                                                                                                                                                        >  SRR13385771.1634841/1‑301 (MQ=60)
                                                TTGCTGAACATCAAAAACCCAAAAAAATAGAAATCTATAAAATACAACGCCAGTGACAACTGCGAGAAACATTGTGAGCAAGTGAACGCACTAAGGGCACCAATTACTAGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTT                                                                                                                                                                                                                                                  >  SRR13385771.71046/1‑301 (MQ=60)
                                                  GCTGAACATCAAAAACCCAAAAAAATAGAAATCTATAAAATACAACGCCAGTGACAACTGCGAGAAACATTGTGAGCAAGTGAACGCACTAAGGGCACCAATTACTAGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTT                                                                                                                                                                                                                                                <  SRR13385771.1347785/301‑1 (MQ=60)
                                                  GCTGAACATCAAAAACCCAAAAAAATAGAAATCTATAAAATACAACGCCAGTGACAACTGCGAGAAACATTGTGAGCAAGTGAACGCACTAAGGGCACCAATTACTAGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATCCAAGTCTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTT                                                                                                                                                                                                                                                >  SRR13385771.1108202/1‑301 (MQ=60)
                                                      AACATCAAAAACCCAAAAAAATAGAAATCTATAAAATACAACGCCAGTGACAACTGCGAGAAACATTGTGAGCAAGTGAACGCACTAAGGGCACCAATTACTAGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCT                                                                                                                                                                                                                                            >  SRR13385771.771481/1‑301 (MQ=60)
                                                                       AAAATAGAAATCTAGAAAGTACAACGCCAGTGACGACTGCTAGAAACATTGTGAGCAAGTGAACGCACGAAGGGCACCAATTACTAGACCTGGG‑AAAAAACTGTTAAAGTTCCAGCAAAGAGCAACCACATAACAGTGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAATTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATATATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTTGTGGTTATAACGAACGA                                                                                                                                                                                                                          <  SRR13385771.1211896/301‑1 (MQ=60)
                                                                           TAGAAATCTATAAAATACAACGCCAGTGACAACTGCGAGAAACATTGTGAGCAAGTGAACGCACTAAGGGCACCAATTACTAGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGATTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAA                                                                                                                                                                                                                        >  SRR13385771.232027/1‑300 (MQ=60)
                                                                                                             GCGAGAAACATTGTGAGCAAGTGAACGCACTAAGGGCACCAATTACTAGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAAC                                                                                                                                                                                     <  SRR13385771.1717385/301‑1 (MQ=60)
                                                                                                                   AACATTGTGAGCAAGTGAACGCACGAAGGGCACCAATTACTAGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGGCTGCAAAGAGGAGGACCATTCAAGGTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGGACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTC                                                                                                                                                                               <  SRR13385771.1636216/301‑1 (MQ=60)
                                                                                                                        TGTGAGCAAGTGAACGCACTAAGGGCACCAATTACTAGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTA                                                                                                                                                                           <  SRR13385771.1475272/300‑1 (MQ=60)
                                                                                                                         GTGAGCAAGTGAACGCACTAAGGGCACCAATTACTAGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACAAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCATAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACC                                                                                                                                                                         >  SRR13385771.1494111/1‑301 (MQ=60)
                                                                                                                               AAGTGAACGCACTAAGGGCACCAATTACTAGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGCTAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACAAAATAC                                                                                                                                                                   >  SRR13385771.1680456/1‑301 (MQ=60)
                                                                                                                                                 CACCAATTACTAGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCAT                                                                                                                                                 <  SRR13385771.193559/301‑1 (MQ=60)
                                                                                                                                                         ACTAGACCTGGGAAACAAACGGTTCAAGTGCCATCAAAGAACAACCACAGAACAATGTTTGATAAGCTCCAAGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGT                                                                                                                                          <  SRR13385771.1860359/300‑1 (MQ=60)
                                                                                                                                                            AGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACAATGTCAGGTTCCC                                                                                                                                      >  SRR13385771.1692553/1‑301 (MQ=60)
                                                                                                                                                                       AAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCAATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTAATATGGAACCAAAGATAACACCTTCAGTACCAAATACAGACCAATCCGGAACCATGTCAGGTTCCGCGACGATCTTG                                                                                                                           >  SRR13385771.172682/1‑301 (MQ=60)
                                                                                                                                                                                      GCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGCGACGATCTTGTTCTTAATTTCTATA                                                                                                            <  SRR13385771.956789/301‑1 (MQ=60)
                                                                                                                                                                                      GCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGCGACGATCTTGTTCTTAATTTCTATA                                                                                                            <  SRR13385771.1470387/301‑1 (MQ=60)
                                                                                                                                                                                                AACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGCGACGATCTTGTTCTTAATTTCTATACCATGCTTTA                                                                                                  <  SRR13385771.1424702/301‑1 (MQ=60)
                                                                                                                                                                                                    ACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCC                                                                                                                                       >  SRR13385771.665185/1‑260 (MQ=60)
                                                                                                                                                                                                        CAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAACGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGCGACGATATTGTTCTTAATTTCTATACCATGCTTTCAAAAGGAT                                                                                          >  SRR13385771.499951/1‑301 (MQ=60)
                                                                                                                                                                                                               ATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGCGACGATCTTGTTCTTAATTTCTATACCATGCTTTAAAAAGGATACGATAT                                                                                   >  SRR13385771.1515136/1‑301 (MQ=60)
                                                                                                                                                                                                                         AGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGCGACGATCTTGCTCTTAATTTCTATACCATGCTTTAAAAACGATACGATATCTCCCTTTGC                                                                         >  SRR13385771.1631093/1‑301 (MQ=60)
                                                                                                                                                                                                                                               CAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAATGAGTCAATGAATGGTACTATGGCACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGCGACGATCTTGTTCTTAATTTCTATACCATGCTTTAAAAAGGATACGATATCTCCCTTTGCCAATTGGTCATTATCAAACAA                                                    >  SRR13385771.803241/1‑300 (MQ=60)
                                                                                                                                                                                                                                                AAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGCGACGATCTTGTTCTTAATTTCTATACCATGCTTTAAAAAGGATACGATATCTCCCTTTGCCAATTGGTCATTATCAAACAAAC                                                  <  SRR13385771.1382474/301‑1 (MQ=60)
                                                                                                                                                                                                                                                            CATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGCGACGATCTTGTTCTTAATTTCTATACCATGCTTTAAAAAGGATACGATATCTCCCTTTGCCAATTGGTCATTATCAAACAAACATTCTGATATCA                                      <  SRR13385771.286470/301‑1 (MQ=60)
                                                                                                                                                                                                                                                             ATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGCGACGATCTTGTTCTTAATTTCTATACCATGCTTTAAAAAGGATACGATATCTCCCTTTGCCAATTGGTCATT                                                             >  SRR13385771.698377/1‑277 (MQ=60)
                                                                                                                                                                                                                                                                                         GCCCAAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGCGACGATCTTGTTCTTAATTTCTATACCATGCTTTAAAAAGGATACGATATCTCCCTTTGCCAATTGGTCATTATCAAACAAACATTCTGATATCATGGGGAAGAGTATTCCTG                    >  SRR13385771.957612/1‑290 (MQ=60)
                                                                                                                                                                                                                                                                                           CCAAAAGAGTAGTGGCACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTAAATGAATGGTACTATGGAACCAAAGATAACACCTGCAGTACCAAATACAGACCAATCAGGCACCATGTCAGGTTCCGCGACGATCTTGTTCTTAATTTCTATACCATGCTTTAAAAAGGATACGATATCTCCCTTTGCCAATTGGTCATTATCAAACAAACATTCTGATATCATGGGGAAGAGTATTCCTGCTATGAATAGAAT       <  SRR13385771.740598/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                             AAAAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGCGACGATCTTGTTCTTAATTTCTATACCATGCTTTAAAAAGGATACGATATCTCCCTTTGCCAATTGGTCATTATCAAACAAACATTCTGATATCATGGGGAAGAGTATTCCTGCTATGAATAGAATA      >  SRR13385771.1762156/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                                               AAGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATACCACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGAGACGATCTTGTTCTTAATTTCTATACCATGCTTTAAAAAGGATACTATATCTCCCTTTGCCAATTGGTCATTATCAAACAAACATTCTGATATCATGGGGAAGAGTATTCCTGCTATGAATAGAATAAAA   <  SRR13385771.442802/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                AGAGTATTGGAACATCTTATAAATGATCCTAGGGTGTGTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGCGACGATCTTTTTCTTAATTTCTATACCATGCTTTAAAAAGGATACGATATCTCCCTTTGCCAATTTGTCATTATCAAACAAACATTCTGATATCATGGGGAAGAGTATTCCTGCTATGAATAGAATAAAAA  <  SRR13385771.1589436/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                        GGAACATCTTATAAATGATCATAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGCGACGATCTTGTTCTTAATTTCTATACCATGCTTTAAAAAGGATACGATATCTCCCTTTGCCAATTGGTCATTATCAAACAAACATTCTGATATCATGGGGAAGAGTATTCCTGCTA                 >  SRR13385771.1424841/1‑278 (MQ=60)
                                                                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                                                                  
ATTGAACGCCCCTATGGGAACACTTAATTGAATAAATATCTGCCCAACTTGCTGAACATCAAAAACCCAAAAAAATAGAAATCTATAAAATACAACGCCAGTGACAACTGCGAGAAACATTGTGAGCAAGTGAACGCACTAAGGGCACCAATTACTAGACCTGGGAAAAAAACGGTTAAAGTGCCATCAAAGAACAACCACAGAACAATGTTTAATAAGCTCCATGCACCAGCTGCCTGCAAAGAGGAGGACCATTCAAGTTTCCTAATACCAAATATTAAGCCCAAAAGAGTATTGGCACATCTTATAAATGATCCTAGGGTGTTTTTGTAAACTGATGACCTGGTTTTTGGCTGGTGTTGATAACGAACGAAAGAGTCAATGAATGGTACTATGGAACCAAAGATAACACCTTCAGTACCAAATACAGCCCAATCAGGCACCATGTCAGGTTCCGCGACGATCTTGTTCTTAATTTCTATACCATGCTTTAAAAAGGATACGATATCTCCCTTTGCCAATTGGTCATTATCAAACAAACATTCTGATATCATGGGGAAGAGTATTCCTGCTATGAATAGAATAAAAA  >  BK006934/370699‑371287

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑