Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AATCTTCCAAAGAGGGACCCAAAAGATCAATGACCAAGATATTGTGCAAACCTTCTTGGCCGAAGTAGTACGCGTAGGGGATATTGGGAGTGCCATTCAGAATTTTATATGTTTTATATTCATCTCTTAATTGAGGGGCCTCCGTTTTTCTGGGCTCGAATTTGATCGCGACGGGTACGCCATTGATCATATTAGTACCTTCAAATAGCACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTGTTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGCTATGGGCATGGACATGGGGAAGAGGAGAGCAGGAAAAGGGCCAGCGAATGCGCGAAATTTTTGTATGTGTCTTTTCTCTACTATGGCATCCACATGAAAACCAGTCACAGAGCACTCAATGAACGGTTTGCGTTTGTTGTTTGTAAGAAGC  >  BK006934/373857‑374446
                                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                                                         
AATCTGCCAAAGAGGGACCCAAAAGATCAAGGACCAAGATATTGTGCAAACCTTCTTGGCCGAAGTAGTACGCGTAGGGGATATTGTGAGTGCCATTCAGAATTTTATATGTTTTATATTCATCTCTTAATTGAGGGGCCTCCGTTTTTCTGGGCTCGAATTTGATCGCGACGGGTACGCCATTGATCATATTAGTACCTTCAAATAGCACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTT                                                                                                                                                                                                                                                                                                   <  SRR13385771.1042508/301‑1 (MQ=60)
        AAAGAGGGACCCAAAAGATCAATGACCAAGATATTGTGCAAACCTTCTTGGCCGAAGTAGTACGCGTAGGGGATATTGGGAGTGCCATTCAGAATTTTATATGTTTTATATTCATCTCTTAATTGAGGGGCCTCCGTTTTTCTGGGCTCGAATTTGATCGCGACGGGTACGCCATTGATCATATTAGTACCTTCAAATAGCACACCAAAGGAACCTTCACCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGCGTTGCTATTGGAGTTGGCGGCGG                                                                                                                                                                                                                                                                                           >  SRR13385771.694379/1‑301 (MQ=60)
                   CAAAAGATCAATGACCAAGATATTGTGCAAACCTTCTTGGCCGAAGTAGTACGCGTAGGGGATATTGGGAGTGCCATTCAGAATTTTATATGTTTTATATTCATCTCTTAATTGAGGGGCCTCCGTTTTTCTGGGCTCGAATTTGATCGCGACGGGTACGCCATTGATCATATTAGTACCTTCAAATAGCACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTC                                                                                                                                                                                                                                                                                >  SRR13385771.1011134/1‑301 (MQ=60)
                                                         GGCCGAAGTAGTACGCGTAGGTGATATTGGGAGTGCCATTCAGAATTTTATATGTTTTATATTCATCTCTTAATTGAGGGGCCTCCGTTTTTCTGGGCTCGAATTTGATCGCGACGGGTACGCCATTGATCATATTAGTACCTTCAAATAGCACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGT                                                                                                                                                                                                                                           <  SRR13385771.1588221/300‑1 (MQ=60)
                                                                         GTAGGGGATATTGGGAGTGCCATTCAGAATTTTATATGTTTTATATTCATCTCTTAATTGAGGGGCCTCCGTTTTTCTGGGCTCGAATTTGATCGCGACGGGTACGCCATTGATCATATTAGTACCTTCAAATAGCACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCT                                                                                                                                                                                                                          <  SRR13385771.1338162/301‑1 (MQ=60)
                                                                           AGGGGATATTTGGAGGGCCATTCAGAATTTTATGTGTGTTATATTGATCTCTTAATTGAGGGGCCTACGTTTTTCTGGGCTCGAATGTGATCGCGACGGGTACGACATTGGTCATATTAGTACCTTCGATTAGCACACCAAAGGAACGTTCTCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTGATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGTGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTT                                                                                                                                                                                                                         <  SRR13385771.1616244/300‑1 (MQ=60)
                                                                                    TGGGAGTGCCATTCAGAATTTTATATGTTTTATATTCATCTCTTAATTGAGGGGCCTCCGTTTTTCTGGGCTCGAATTTGATCGCGACGGGTACGCCATTGATCATATTAGTACCTTCAAATAGCACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAA                                                                                                                                                                                                                >  SRR13385771.1180873/1‑300 (MQ=60)
                                                                                    TGGGAGTGCCATTCAGAATTTTATATGTTTTATATTCATCTCTTAATTGAGGGGCCTCCGTTTTTCTGGGCTCGAATTTGATCGCGACGGGTACGCCATTGATCATATTAGTACCTTCAAATAGCACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAA                                                                                                                                                                                                                >  SRR13385771.153048/1‑300 (MQ=60)
                                                                                     GGGAGTGCCATTCAGAATTTTATATGTTTTATATTCATCTCTTAATTGAGGGGCCTCCGTTTTTCTGGGCTCGAATTTGATCGCGACGGGTACGCCATTGATCATATTAGTACCTTCAAATAGCACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGGGGTGGGGTTGTTTGGGTGCTTGTACGTTAAA                                                                                                                                                                                                               >  SRR13385771.1479419/1‑300 (MQ=60)
                                                                                       GAGTGCCATTCAGAATTTTATATGTTTTATATTCATCTCTTAATTGAGGGGCCTCCGTTTTTCTGGGCTCGAATTTGATCGCGACGGGTACGCCATTGATCATATTAGTACCTTCAAATAGCACACCAAAGGAACCTTCCCCTAGTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATT                                                                                                                                                                                                            <  SRR13385771.1684301/301‑1 (MQ=60)
                                                                                                TCAGAATTTTATATGTTTTATATTCATCTCTTAATTGAGGGGCCTCCGTTTTTCTGGGCTCGAATTTGATCGCGACGGGTACGCCATTGATCATATTAGTACCTTCAAATAGCACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTC                                                                                                                                                                                                    <  SRR13385771.1794357/300‑1 (MQ=60)
                                                                                                  AGAATTTTATATGTTTTATATTCATCTCTTAATTGAGGGGCCTCCGTTTTTCTGGGCTCGAATTTGATCGCGACGGGTACGCCATTGATCATATTAGTACCTTCAAATAGCACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGT                                                                                                                                                                                                 <  SRR13385771.264919/301‑1 (MQ=60)
                                                                                                                                          CCTCCGTTTTTCTGGGCTCGAATTTGATCGCGACGGGTACGCCATTGATCATATTAGTACCTTCAAATAGCACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGC                                                                                                                                                         >  SRR13385771.710915/1‑301 (MQ=60)
                                                                                                                                                                     TCGCGACGGGTACGCCATTGATCATATTAGTACCTTCAAATAGCACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTCGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGCGTTGTTTGTTTGCTTGTACGTTACAATTTGCGTTTCCGTTTCTATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGCTATGGGCATGGACATGGGGAAGCGG                                                                                                                                >  SRR13385771.1132986/1‑299 (MQ=60)
                                                                                                                                                                                     ATTTATCATATTAGTACCTTCAAAGAGCTCACCAAAGTAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGTCGGCGGTCGTTGCGGTCATCGAAGATCGTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTGAACTGCTAGAGTGTTACTTGCTATGGGCATGGACATGGGGAAGAGGAGAGCAGGAAAAGGGCCA                                                                                                              <  SRR13385771.1502492/301‑1 (MQ=60)
                                                                                                                                                                                            ATATTAGTACCTTCAAATAGCACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGCTATGGGCATGGACATGGGGAAGAGGAGAGCAGGAAAAGGGCCAGCGAATG                                                                                                       >  SRR13385771.1146900/1‑301 (MQ=60)
                                                                                                                                                                                                 AGTACCTTCAAATAGCACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCAGTTTATAT                                                                                                                                                                                           <  SRR13385771.116123/212‑1 (MQ=60)
                                                                                                                                                                                                 AGTACCTTCAAATAGAACACCAAAGGAACCTTCCCCTATTTGTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGCTATGGGCATGGACATGGGGAAGAGGAGAGCAGGAAAAGGGCCAGCGAATGCGCG                                                                                                   <  SRR13385771.1531126/300‑1 (MQ=60)
                                                                                                                                                                                                          AAATAGCACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCCTCTCTGGAAGCGTTGCCATTGGAGTTGGCGGCGCTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGACTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGATTGGTACTTGCTATGGGAATGGACATGGGGAAGAGGAGAGCAGGAAAAGGGCAAGCGAATGCGCGAACTTTTTGT                                                                                         >  SRR13385771.398118/1‑301 (MQ=60)
                                                                                                                                                                                                                 ACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTTCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGCTATGGGCATGGACATGGGGTAGAGGAGAGCAGGAAAAGGGCCAGCGAATGCGCGAAATTTTTGTATGTGAC                                                                                  >  SRR13385771.627532/1‑301 (MQ=60)
                                                                                                                                                                                                                    CCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGCTATGGGCACGGACATGGGGAAGAGGAGAGCAGGAAAAGGGCCAGCGAATGCGCGAAATTTTTGTATGTGTCTTT                                                                               >  SRR13385771.1243437/1‑301 (MQ=60)
                                                                                                                                                                                                                              atgactCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTGGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGCTATGGGCATGGACATGGGGAAGAGGAGAGCAGGAAAAGGGCCAGCGAATGCGCGAAATTTTTGTATGTGTCTTTTCTCTACTAT                                                                     <  SRR13385771.672230/295‑1 (MQ=60)
                                                                                                                                                                                                                               TTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGCTATGGGCATGGACATGGGGAAGAGGAGAGCAGGAAAAGGGCCAGCGAATGCGCGAAATTTTTGTATGTGTCTTTTCTCTACTATG                                                                    >  SRR13385771.1351391/1‑301 (MQ=60)
                                                                                                                                                                                                                                    CTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGCTATGGGCATGGACATGGGGACGAGGAGAGCAGGAAAAGGGCCAGCGAATGCGCGAAATCTTTGTATGTGTCTTTTCTCTACTATGGCATC                                                               >  SRR13385771.6110/1‑301 (MQ=60)
                                                                                                                                                                                                                                      ATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGTCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGGGTTGTTTGTTTGCTTGTACGTTAATATTTTCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGATAGAGTGGTGCTTGCTATGGGCATGGACATTGGGAAGAGGAGAGCAGGATAAGGGTCAGCGAATGCGCGTAATTTTTGTATGTGTCTTTTCTCTACTACGGCATCC                                                              >  SRR13385771.876191/1‑300 (MQ=60)
                                                                                                                                                                                                                                      ATTTTTGTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCAGCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGCTATGGGCATGGACATGGGGAAGAGGAGAGCAGGAAAAGGGCCAGCGAATGCGCGAAATTTTTGTATGTGTCTTTTCTCTACTATGGCATCCA                                                             <  SRR13385771.1700761/301‑1 (MQ=60)
                                                                                                                                                                                                                                                      TGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGCTATGGGCATGGACATGGGGAAGAGGAGAGCAGGAAAAGGGCCAGCGAATGCGCGAAATTTTTGTATGTGTCTTTTCTCTACTATGGCATCCACATGAAAACCAG                                                 <  SRR13385771.1338328/297‑1 (MQ=60)
                                                                                                                                                                                                                                                      TGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGCTATGGGCATGGACATGGGGAAGAGGAGAGCAGGAAAAGGGCCAGCGAATGCGCGAAATTTTTGTATGTGTCTTTTCTCTACTATGGCATCCACATGAAAAC                                                    <  SRR13385771.549286/294‑1 (MQ=60)
                                                                                                                                                                                                                                                        TAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGCGTCGACAGCCTGGTGGTGGCGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGCTATGGGCATGGACATGGGGAAGAGGAGAGCAGGAAAAG                                                                                                                   >  SRR13385771.1821352/1‑229 (MQ=60)
                                                                                                                                                                                                                                                         AATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTA                                                                                                                                                                             <  SRR13385771.941180/170‑1 (MQ=60)
                                                                                                                                                                                                                                                                       ATAGTAGAGTCATCTCTGGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGCTATGGGCATGGACATGGGGAAGAGGAGAGCAGGAAAAGGGCCAGCGAATGCGCGAAATTTTTGTATGTGTCTTTTCTCTACTATGGCATCCACATGAAAACCAGTCACAGAGCACTCAATGAACG                            <  SRR13385771.620093/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                        GGAAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGCTATGGGCATGGACATGGGGAAGAGGAGAGCAGGAAAAGGGCCAGCGAATGCGCGAAATTTTTGTATGTGTCTTTTCTCTACTATGGCATCCACATGAAAACCAGTCACAGAGCACTCAATGAACGGTTTGCGTTTGTTGTTT           >  SRR13385771.685939/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                          AAGAGTTGCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCccccccgtcccccccctcctcctccctctctttctttcctcctcccttcccctctccctttccctctctcctcctccccttcttcccccctcccctcctccttcctctccccctccccctcccccccatccccgcaggtccccgcccacccccctcccgcactctttctatctctcttctcccccctctcccctccccctcccaccccctcccccccccctccccgccccccctccccctcctcctccc         >  SRR13385771.1299677/1‑52 (MQ=60)
                                                                                                                                                                                                                                                                                                 GCTATTGGAGTTGGCGGCGGTCGTGGCGGTCATCGCAGCTCTTGCGGGCGAGTCGACAGCCTGGTGCTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCAGTTTATATTGGTGAGGTTGTTAAATGCTAGAGTGGTACTTGCTATGGGCATGGACATGGGGACGCGGAGAGCAGGACAAGGGCCAGCGAATGCGCGAAATTTTTGTATGTGTCTTTTCTCTACTATGGCATCCACATGAAAACCAGTCACAGAGCACTCAATGAACGGTTAGCGTTCGTTGTTAGTAAGAAGC  >  SRR13385771.1675089/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                                                         
AATCTTCCAAAGAGGGACCCAAAAGATCAATGACCAAGATATTGTGCAAACCTTCTTGGCCGAAGTAGTACGCGTAGGGGATATTGGGAGTGCCATTCAGAATTTTATATGTTTTATATTCATCTCTTAATTGAGGGGCCTCCGTTTTTCTGGGCTCGAATTTGATCGCGACGGGTACGCCATTGATCATATTAGTACCTTCAAATAGCACACCAAAGGAACCTTCCCCTATTTTTTTGCCGATCTTGTAATGTAGGCCGACAATAGTAGAGTCATCTCTGGAAGAGTTGCTGTTGGAGTTGGCGGCGGTCGTGGCGGTCATCGAAGATCTTGCGGGCGAGTCGACAGCCTGGTGGTGGAGTTGTTTGTTTGCTTGTACGTTAAAATTTGCGTTTCCGTTTATATTGGTGAGGTTGTTAACTGCTAGAGTGGTACTTGCTATGGGCATGGACATGGGGAAGAGGAGAGCAGGAAAAGGGCCAGCGAATGCGCGAAATTTTTGTATGTGTCTTTTCTCTACTATGGCATCCACATGAAAACCAGTCACAGAGCACTCAATGAACGGTTTGCGTTTGTTGTTTGTAAGAAGC  >  BK006934/373857‑374446

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑