Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	6081	0.0	0	0.0%	0	0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TGAGTAACCTTGTGTTGAGTGTGCTTACGACAGGTCTTACCCTTACAGTAGGTCTTTCTGGTCTTTGGGACGTTAACTGGTTCAAAATGATATCACAGCAAATTTAGCATGATAGTTGATTGTTAGTAATTGATCTT‑AAAAAAAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTAAAAGGGCCAATAAAAGTATCATTCAGGTGTTCAGTACTTTAGGAAATGATGAAAATATTTAACTAGCTCAAAAGTA‑AATGAAGTTTAATAACTATTAGTTTCTTGCTTGACATGGATTTGCCCTACGATTCAGGATATTTTAAAAAGTTCTTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTATT‑C‑CTAATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATTTACGTTAAAACAGTGAAAATACCACATCAATTA  >  BK006934/382231‑382821

TGAGTAACCTTGTGTTGAGTGTGCTTACGACAGGTCTTACCCTTACAGTAGGTCTTTCTGGTCTTTGGGACGTTAACTGGTTCAAAATGATATCACAGCAAATTTAGCATGATAGTTGATTGTTAGTAATTGATCTTAAAAAAAAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGG                                                                                                                                                                                                                                                                                                        >  SRR13385771.291352/1‑301 (MQ=60)

                         tacgacaggtttttcccttgacgttGGTCTTTCTGGTCTTTGGGAAGTTTACTGGTTCAAAATGATATCCCAGCAAATTTAGCATGTTAGTTGATTGTTAGTAATTGATCTT‑AAAAAAAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGA                                                                                                                                                                                                                                                                               <  SRR13385771.909943/275‑1 (MQ=60)

                         TACTACAGGTCTTACCCTTACAGTAGGTCTTTCTGGTCTTTGGGACGTTAACTGGTTCAAAATGATATCACAGCAAATTTAGCATGATAGTTGATTGTTAGTAATTGATCTTAAAAAAAAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGAGATCCTTAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGAT                                                                                                                                                                                                                                                                                 <  SRR13385771.1747994/299‑1 (MQ=60)

                          ACGACAGGTCTTACCCTTACAGTAGGTCTTTCTGGTCTTTGGGACGTTAACTGGTTCAAAATGATATCACAGCAAATTTAGCATGATAGTTGATTGTTAGTAATTGATCTTAAAAAAAAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGA                                                                                                                                                                                                                                                                               <  SRR13385771.1482727/300‑1 (MQ=60)

                                      ACCCTTACAGTAGGTCTTTCTGGTCTTTGGGACGTTAACTGGTTCAAAATGATATCACAGCAAATTTAGCATGATAGTTGATTGTTAGTAATTGATCTTAAAAAAAAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTA                                                                                                                                                                                                                                                                  <  SRR13385771.1615761/301‑1 (MQ=60)

                                                TAGGTCTTTCTGGTCTTTGGGACGTTAACTGGTTCAAAATGATATCACAGCAAATTTAGCATGATAGTTGATTGTTAGTAATTGATCTTAAAAAAAAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGACACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGT                                                                                                                                                                                                                                                        >  SRR13385771.378359/1‑301 (MQ=60)

                                                   GTCTTGCTGGTCTTTGGGACGTTAACTGGTTCAAAATGATATCACAGCAAATTTAGCATGATAGTTGATTGTCAGTAATTGATCTTAAAAAAAAAAGTAATTTGACTGCACATGGAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTA‑GA                                                                                                                                                                                                                                                    <  SRR13385771.1677772/301‑1 (MQ=60)

                                                       TTCTGGTCTTTGGGACGTTAACTGGTTCAAAATGATATCACAGCAAATTTAGCATGATAGTTGATTGTTAGTAATTGATCTTAAAAAAAAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAgaa                                                                                                                                                                                                                                                    <  SRR13385771.1694374/298‑4 (MQ=60)

                                                               TTTGGGACGTTAACTGGTTCAAAATGATATCACAGCAAATTTAGCATGATAGTTGATTGTTAGTAATTGATCTTAAAAAAAAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAAT                                                                                                                                                                                                                                         >  SRR13385771.161531/1‑301 (MQ=60)

                                                                           ACTGGTTCAAAATGATATCACAGCAAATTTAGCATGATAGTTGATTGTTAGTAATTGATCTTAAAAAAAAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAaatt                                                                                                                                                                                                                             >  SRR13385771.343961/1‑297 (MQ=60)

                                                                                  CAAAAAGATATCAAAGCAAATTTAGCATGATAGTTGATTGTTAGTAATTGATCTTAAAAAAAAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATAGCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATTATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCT                                                                                                                                                                                                                       <  SRR13385771.1259187/300‑1 (MQ=60)

                                                                                                  CAAATTTAGCATGATAGTTGATTGTTAGTAATTGATCTTAAAAAAAAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTT                                                                                                                                                                                                      <  SRR13385771.577918/301‑1 (MQ=60)

                                                                                                        TAGCATGATAGTTGATTGTTAGTAATTGATCTTAAAAAAAAAAGTAATTTGCCTGCAAATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATATAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGAT                                                                                                                                                                                                 <  SRR13385771.403542/300‑1 (MQ=60)

                                                                                                                     GATTGTTAGTAATTGATCTTAAAAAAAAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTA                                                                                                                                                                                    <  SRR13385771.663470/300‑1 (MQ=60)

                                                                                                                                ATTGATCTTAAAAAAAAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGTGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAAtttcttagc                                                                                                                                                                        >  SRR13385771.306243/1‑292 (MQ=60)

                                                                                                                                          AAAAAAAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGT                                                                                                                                                              >  SRR13385771.1727855/1‑299 (MQ=60)

                                                                                                                                               AAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCA                                                                                                                                                                                                                                                                                                          >  SRR13385771.353175/1‑156 (MQ=60)

                                                                                                                                                AAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTG                                                                                                                                                      >  SRR13385771.545532/1‑301 (MQ=60)

                                                                                                                                                                            TTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAAT                                                                                                                          >  SRR13385771.166768/1‑301 (MQ=60)

                                                                                                                                                                             TGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAAT                                                                                                                          <  SRR13385771.1157755/300‑1 (MQ=60)

                                                                                                                                                                                    TTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCACTAATGGAGATA                                                                                                                   >  SRR13385771.668861/1‑300 (MQ=60)

                                                                                                                                                                                             AATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTACTGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATACAAGTATCCTTCCGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTATTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTAAACTCTACCGCCCTAATGGAGATAAATAAAATGG                                                                                                         >  SRR13385771.1361574/1‑301 (MQ=60)

                                                                                                                                                                                                   GAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTC                                                                                                   >  SRR13385771.1432260/1‑301 (MQ=60)

                                                                                                                                                                                                             AATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTATT‑C‑Ccta                                                                                        >  SRR13385771.986423/1‑297 (MQ=60)

                                                                                                                                                                                                                     AATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATCATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTATTCC‑CTAATCGTCCAC                                                                                <  SRR13385771.56662/301‑1 (MQ=60)

                                                                                                                                                                                                                       TATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTATAGTAGTACATGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTATTCC‑CTAATCGTCCACAT                                                                              >  SRR13385771.25840/1‑301 (MQ=60)

                                                                                                                                                                                                                           TAATGAGTATTACTAATGATATCCTCAATATATTTTATAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTATCACGCCCTAATGGAGATAAATAACATGGTTTGTCTATT‑CACTAATCGTCCACATACCC                                                                          >  SRR13385771.1395930/1‑301 (MQ=60)

                                                                                                                                                                                                                               GAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCATGCCCTAATGGAGATAAATAACATGGTTTGTCTATTCC‑CTAATCGTCCACATACCCATTT                                                                      >  SRR13385771.1513854/1‑301 (MQ=60)

                                                                                                                                                                                                                                                 CCTCAATATATTTTCTAACCAGAGTTCTTATTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTATTCC‑CTAATCGTCCACATACCC                                                                          <  SRR13385771.1745934/279‑1 (MQ=60)

                                                                                                                                                                                                                                                                               TTATAAGGGCCAATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTATTCC‑CTAATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAAC                        >  SRR13385771.412789/1‑299 (MQ=60)

                                                                                                                                                                                                                                                                                     GGGACAATAAAAGTATCCTTCAGGTGTTAAGTACTTTGAGAAATGATGAAAATATTTAGCTAGATCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTATTCC‑CTAATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAA                <  SRR13385771.1299552/301‑1 (MQ=60)

                                                                                                                                                                                                                                                                                          AATAAAAGTATCCTTCAGGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTATTCC‑CTAATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACC            >  SRR13385771.721007/1‑300 (MQ=60)

                                                                                                                                                                                                                                                                                                   ATCCTTCATGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTATTCC‑CTAATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTA  <  SRR13385771.1307593/301‑1 (MQ=60)

TGAGTAACCTTGTGTTGAGTGTGCTTACGACAGGTCTTACCCTTACAGTAGGTCTTTCTGGTCTTTGGGACGTTAACTGGTTCAAAATGATATCACAGCAAATTTAGCATGATAGTTGATTGTTAGTAATTGATCTT‑AAAAAAAAAGTAATTTGACTGCACATGTAATTAGTTGTATCTTTTTTCTGTAATGGGGAAACGGCTAAATTCACAAATATCTAATGAGTATTACTAATGATATCCTCAATATATTTTCTAACCAGAGTTCTTATTAAAAGGGCCAATAAAAGTATCATTCAGGTGTTCAGTACTTTAGGAAATGATGAAAATATTTAACTAGCTCAAAAGTA‑AATGAAGTTTAATAACTATTAGTTTCTTGCTTGACATGGATTTGCCCTACGATTCAGGATATTTTAAAAAGTTCTTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTATT‑C‑CTAATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATTTACGTTAAAACAGTGAAAATACCACATCAATTA  >  BK006934/382231‑382821

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`