Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	6081	0.0	0	0.0%	0	0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ATCATTCAGGTGTTCAGTACTTTAGGAAATGATGAAAATATTTAACTAGCTCAAAAGTA‑AATGAAGTTTAATAACTATTAGTTTCTTGCTTGACATGGATTTGCCCTACGATTCAGGATATTTTAAAAAGTTCTTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑T‑CC‑T‑AATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATTTACGTTAAAACAGTGAAAATACCACATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTTTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGGACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCAGTCTGGCCGCATTTTTGACAGCGATCTTTTTTTGTATCAAGACTTCTTCCAATGTCAGGATTTA‑TTTTCATGATGT  >  BK006934/382521‑383105

ATCCTTCATGTGTTCAGTACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑TCCC‑T‑AATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTA                                                                                                                                                                                                                                                                                               <  SRR13385771.1307593/301‑1 (MQ=60)

                 TACTTTGAGAAATGATGAAAATATTTAGCTAGCTCAAACGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTATTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑TCCC‑T‑AATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAAC                                                                                                                                                                                                                                                                              >  SRR13385771.697386/1‑301 (MQ=60)

                     ttgaGAAATGAGGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑TCCC‑T‑AATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAAT                                                                                                                                                                                                                                                                           <  SRR13385771.1128106/296‑1 (MQ=60)

                          AAATGATGAAAATATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTCATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑TCCC‑T‑AATCGTCCACATACCCATTCTTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGCAAATACCATATCAATTAAGATATACATTGTCAACAATATGGCT                                                                                                                                                                                                                                                                     >  SRR13385771.121899/1‑301 (MQ=60)

                          AAATGATGAAAATATTGAGCTAGCTCAAAAGTAGAATGAAGTTGAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAAGTACACTCTCACGCCCTAATGGAGATAAATAACATGGTGTGTCTAT‑TCCC‑T‑AATCGTCCACATACCCATTATTACTGAGTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGAT                                                                                                                                                                                                                                                                     <  SRR13385771.1793386/301‑1 (MQ=60)

                                       ATTTAGCTAGCTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑TCCC‑T‑AATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGT                                                                                                                                                                                                                                                         <  SRR13385771.93835/300‑1 (MQ=60)

                                                 CTCAAAAGTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑TCCC‑T‑AATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACG                                                                                                                                                                                                                                              >  SRR13385771.533988/1‑301 (MQ=60)

                                                        GTAGAATGAAGTTTAATAACTATTAAATTCTTGCTTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑TCCC‑T‑AATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATT                                                                                                                                                                                                                                       <  SRR13385771.894626/301‑1 (MQ=60)

                                                                                          TTGACATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑TCCC‑T‑AATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCGGAGTTCATTTCTACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCC                                                                                                                                                                                                     >  SRR13385771.908247/1‑301 (MQ=60)

                                                                                               ATGGATTTGCCTTACGATTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑TCCC‑T‑AATCGTCCACATACCCATTATTACTGCTTGTCTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATACTTCTACCTCTCTTGCTGGACAGCCTTCCCTCCCCCTGGCGG                                                                                                                                                                                                >  SRR13385771.1605034/1‑301 (MQ=60)

                                                                                                                TTCAGGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑TCCC‑T‑AATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATC                                                                                                                                                                                     <  SRR13385771.1111162/295‑1 (MQ=60)

                                                                                                                    GGATATTTTAAAA‑‑TTTCTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCGAAGGGAGATAAATAACATGGTTGGTTTAT‑T‑AT‑TGAATCGTCCACATACCCATTATTACTGATGGGTTTTTTGAGTAATCTCCTTCAATATAAGTTAAAACAGTGAAAATAACATATCAATGAAGATATAAATTGTCAACAATATGGATGTATATATGATGTAATTTAGATGAATAATTCTACCTCTCTTGGTGGAAAGCCTTagctgatggcggcggaacaaataatattgctcaat                                                                                                                                                                            >  SRR13385771.1339845/1‑265 (MQ=60)

                                                                                                                                       TTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑TCCC‑T‑AATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTT                                                                                                                                                          >  SRR13385771.506991/1‑301 (MQ=60)

                                                                                                                                                      TACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑T‑CCAT‑AATCGTCCACATACACATTATTACTGATTGATTTTTTGATTAATATAATTAAATCTACGTTAAAACAGTGAAAATACCATATCAATTACGCACTACATCGTCAACAATATGGATGTATCTATGAGTTCATTTCGACGAATAATTATAACTCTCTTGGTGGAAAACCTTCCCTCCCCCTGGCGGAACCCATCATAACGTCGAACAACTAAACCGTCAGCGTTGCCGCACCAACGAAC                                                                                                                                           >  SRR13385771.1866997/1‑301 (MQ=60)

                                                                                                                                                            TGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑TCCC‑T‑AATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCCATTAAGATATAAATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGcacgacccc                                                                                                                                     >  SRR13385771.1207619/1‑292 (MQ=60)

                                                                                                                                                                   ATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑TCCC‑T‑AATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGG                                                                                                                              >  SRR13385771.937449/1‑301 (MQ=60)

                                                                                                                                                                     TACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑TCCC‑T‑AATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCGTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAAAAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGT                                                                                                                             <  SRR13385771.925927/300‑1 (MQ=60)

                                                                                                                                                                               CGCCCTAATGGAGATAAATAACATGGTTTGTCTATGC‑CC‑T‑AATCGTCCACATACCAATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTATCTAGAGGTCGTCTCTCCGT                                                                                                                  <  SRR13385771.225208/301‑1 (MQ=60)

                                                                                                                                                                                                 TAACATGGTTTGTCTAT‑TCCC‑T‑AATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTCCGTTAAAACAGTGAAAATACCATATCAATTAAGATCTACATTGTCAACAATATGGATGTATCTCTGCGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTACAGGTCGTCTCTCCGTCTGAACATACGCACTGTT                                                                                                >  SRR13385771.1453904/1‑301 (MQ=60)

                                                                                                                                                                                                                             CGTCCACATACCCATTATTACTGATTGTTGTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAATATATACATTGTCAACAATATGTATGTATCTCTGAGTTCATTTCGACGAATAATTCTTCCTCTCTTTGTTGAAAGCCTTCCCGCCCCCTTGCTGAACCCATCATCCCGTCTAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGAC                                                                        <  SRR13385771.1834883/300‑1 (MQ=60)

                                                                                                                                                                                                                                         CATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCAGATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACA                                                           <  SRR13385771.1892645/301‑1 (MQ=60)

                                                                                                                                                                                                                                           TTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGC                                                         >  SRR13385771.1417682/1‑301 (MQ=60)

                                                                                                                                                                                                                                                   GATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGACGTCTGACTGCATTTTTGACAGCGATATTTT                                                 >  SRR13385771.562122/1‑301 (MQ=60)

                                                                                                                                                                                                                                                    ATTGTTTTTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGAGGCGGTCTGACTGCATTTTTGACAGCGATATTTTT                                                >  SRR13385771.1830314/1‑301 (MQ=60)

                                                                                                                                                                                                                                                           TTTTGCTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATC                                         >  SRR13385771.1555212/1‑301 (MQ=60)

                                                                                                                                                                                                                                                                CTTAATCTCCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATCATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCTACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTCTTGTATCAAGAC                                    >  SRR13385771.1762808/1‑301 (MQ=60)

                                                                                                                                                                                                                                                                        CCTTCAATCTACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTA                               <  SRR13385771.383040/298‑1 (MQ=60)

                                                                                                                                                                                                                                                                                  ACGTTAAAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGA                   <  SRR13385771.1153004/300‑1 (MQ=60)

                                                                                                                                                                                                                                                                                   CGTTAAACCAGTGAAAATACCATATCAATTAAGATATACCTTGTCAACAATATGGCTGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATT                 <  SRR13385771.100989/301‑1 (MQ=60)

                                                                                                                                                                                                                                                                                        AAACAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTA‑TTT           >  SRR13385771.549366/1‑301 (MQ=60)

                                                                                                                                                                                                                                                                                           CAGTGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTA‑TTTTtc        <  SRR13385771.348149/301‑3 (MQ=60)

                                                                                                                                                                                                                                                                                              TGAAAATACCATATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCCCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGCTGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTA‑TTTTtcatt     >  SRR13385771.755425/1‑296 (MQ=60)

                                                                                                                                                                                                                                                                                                   ATACCATATCAATTAAGATATACATTGTCCACCATATGGATGTATCTCTGAGTTCATTTCGACGACTAATTCTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGACAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATTTTTCATGATGT  >  SRR13385771.1421687/1‑300 (MQ=60)

ATCATTCAGGTGTTCAGTACTTTAGGAAATGATGAAAATATTTAACTAGCTCAAAAGTA‑AATGAAGTTTAATAACTATTAGTTTCTTGCTTGACATGGATTTGCCCTACGATTCAGGATATTTTAAAAAGTTCTTTAGCATTCTAGTAGTACCTGTGTACTAATTACACTCTCACGCCCTAATGGAGATAAATAACATGGTTTGTCTAT‑T‑CC‑T‑AATCGTCCACATACCCATTATTACTGATTGTTTTTTTGCTTAATCTCCTTCAATTTACGTTAAAACAGTGAAAATACCACATCAATTAAGATATACATTGTCAACAATATGGATGTATCTCTGAGTTCATTTCGACGAATAATTTTACCTCTCTTGGTGGAAAGCCTTCCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGGACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCAGTCTGGCCGCATTTTTGACAGCGATCTTTTTTTGTATCAAGACTTCTTCCAATGTCAGGATTTA‑TTTTCATGATGT  >  BK006934/382521‑383105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`