Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGGACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCAGTCTGGCCGCATTTTTGACAGCGATCTTTTTTTGTATCAAGACTTCTTCCAATGTCAGGATTTA‑T‑TTTCATGATGTATGGGTGTATCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAGAGAATGCTATGGAAAATA‑‑ATA‑‑TGTAGCAACATAGCCAACTAATTGCCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAAGTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGGAAAGTTTATTTCATCAAAACTA  >  BK006934/382903‑383488
                                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                                      
CCTCCCCCTGGCGGAACCCATCCTCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATT                                                                                                                                                                                                                                                                                                  <  SRR13385771.1601842/301‑1 (MQ=60)
         GGCGGAACCCATCATCCCTTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTatcat                                                                                                                                                                                                                                                                                         <  SRR13385771.535238/301‑6 (MQ=60)
             GAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCA                                                                                                                                                                                                                                                                                     <  SRR13385771.1908207/301‑1 (MQ=60)
                             CGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGT                                                                                                                                                                                                                                                                      >  SRR13385771.770619/1‑300 (MQ=60)
                                  AACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATAATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATT                                                                                                                                                                                                                                                                >  SRR13385771.625372/1‑301 (MQ=60)
                                           GTCGGCGTTGCCGCACCGACGAACGTCTCTCGAGAGGTCGTCTCTCCGTCTGAACATACGCACGGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCC                                                                                                                                                                                                                                                       <  SRR13385771.21684/301‑1 (MQ=60)
                                               GCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGT                                                                                                                                                                                                                                                   <  SRR13385771.751256/301‑1 (MQ=60)
                                                   TGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGCTATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGACACTACTATG‑‑TGTAGCAACATAACCAATTAATTATCATTGCATTAACTTTTGGAAGTACTATTTACAATGCCATGTTTTT                                                                                                                                                                                                                                               >  SRR13385771.1822220/1‑301 (MQ=60)
                                                    GCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGTACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTA                                                                                                                                                                                                                                               <  SRR13385771.1870422/300‑1 (MQ=60)
                                                       GGACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAAGTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTT                                                                                                                                                                                                                                           <  SRR13385771.1183758/301‑1 (MQ=60)
                                                        CACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTG                                                                                                                                                                                                                                          <  SRR13385771.572639/301‑1 (MQ=60)
                                                            GACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGTATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTAC                                                                                                                                                                                                                                      >  SRR13385771.1172204/1‑301 (MQ=60)
                                                               GAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCA                                                                                                                                                                                                                                                                                     <  SRR13385771.946568/251‑1 (MQ=60)
                                                                  CGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGATTTATGTTGTTACAGTAgt                                                                                                                                                                                                                                >  SRR13385771.855843/1‑299 (MQ=60)
                                                                      TCTCTAGAGGTCGTTTCTCCGTCTGAACATACGGACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTAAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAgttta                                                                                                                                                                                                                             <  SRR13385771.1609668/300‑6 (MQ=60)
                                                                                       TCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCA                                                                                                                                                                                                                                                                        >  SRR13385771.303071/1‑240 (MQ=60)
                                                                                                  ATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATAAATTAGCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCG                                                                                                                                                                                                <  SRR13385771.279629/301‑1 (MQ=60)
                                                                                                          TGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTACAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTT                                                                                                                                                                                         >  SRR13385771.649508/1‑300 (MQ=60)
                                                                                                              ggtaaaatgaagaggaagtctgactGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTGTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTCTATGTTGGTACAGTAGTTTATTGACATCCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAAC                                                                                                                                                                                    >  SRR13385771.1340125/26‑301 (MQ=60)
                                                                                                              GGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTGCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGGCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAAC                                                                                                                                                                                    <  SRR13385771.892479/301‑1 (MQ=60)
                                                                                                                                        CATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACA                                                                                                                                                           >  SRR13385771.881365/1‑300 (MQ=60)
                                                                                                                                           TTTTGACAGCGATCTTTTTTTGTATCAAGACTTCTACCACTGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAACCGGTTAAATATTGAAAAAGTTTCACAAGAC                                                                                                                                                       >  SRR13385771.1872306/1‑301 (MQ=60)
                                                                                                                                                     GATATTTTTTTTTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAA                                                                                                                                             <  SRR13385771.1518510/301‑1 (MQ=60)
                                                                                                                                                     GATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCA                                                                                                                                              >  SRR13385771.1340719/1‑300 (MQ=60)
                                                                                                                                                              TTGTATCAAGACTTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATC                                                                                                                                     <  SRR13385771.1765117/300‑1 (MQ=60)
                                                                                                                                                                GTATCAAGACTTCTACCAATGTCAGGATTTA‑TGTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATTTAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATGGTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTGCGCTTTCTTAAAACGGTTAAATAGTGAAAAAGTTACACAAGACACGAAATCAAAAAGGATCCAT                                                                                                                                  <  SRR13385771.1121276/301‑1 (MQ=60)
                                                                                                                                                                          TTCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTAACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAA                                                                                                                                                                                                                                                                                                        >  SRR13385771.1820779/1‑125 (MQ=60)
                                                                                                                                                                           TCTACCAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAACGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAA                                                                                                                        >  SRR13385771.1281932/1‑300 (MQ=60)
                                                                                                                                                                                CAATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAG                                                                                                                  <  SRR13385771.1506931/301‑1 (MQ=60)
                                                                                                                                                                                  ATGTCAGGATTTATT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCCCTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGC                                                                                                                 >  SRR13385771.1434300/1‑300 (MQ=60)
                                                                                                                                                                                              atT‑TTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACT                                                                                                    >  SRR13385771.1289665/3‑301 (MQ=60)
                                                                                                                                                                                                     CATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTA                                                                                              <  SRR13385771.322955/301‑1 (MQ=60)
                                                                                                                                                                                                          TGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGCAAATA‑‑ATATGTGTCGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGACATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAA                                                                                           >  SRR13385771.1727058/1‑299 (MQ=60)
                                                                                                                                                                                                             ATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAATTGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATT                                                                                      >  SRR13385771.829925/1‑301 (MQ=60)
                                                                                                                                                                                                                         GATGTGCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATTGAAAATA‑‑ATATGTGTAGCAACATTAACTATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTATTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAA                                                                          <  SRR13385771.469022/301‑1 (MQ=60)
                                                                                                                                                                                                                          ATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCAGTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTGCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAA                                                                         <  SRR13385771.588435/301‑1 (MQ=60)
                                                                                                                                                                                                                                GGATGTCACTTTCTTTTATTTTGAAGTTTGGTACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATTCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACA                                                                   <  SRR13385771.373119/301‑1 (MQ=60)
                                                                                                                                                                                                                                   TGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTG                                                                                                                                                                                                            >  SRR13385771.250706/1‑161 (MQ=60)
                                                                                                                                                                                                                                    GTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAAGTAATTATCATGGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTGCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTTGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTG                                                                <  SRR13385771.173217/300‑1 (MQ=60)
                                                                                                                                                                                                                                             TTTTATTTTGAAGTTTGTGACAAAGAATGATATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTG                                                      >  SRR13385771.1465970/1‑301 (MQ=60)
                                                                                                                                                                                                                                                  TTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTT                                                                                                                                                                                <  SRR13385771.903167/174‑1 (MQ=60)
                                                                                                                                                                                                                                                                      AATGCTATGGAAAATA‑‑ATATGTGTAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCA                             <  SRR13385771.1140712/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                   AACATAACCAATTAATTAGCATTGCATTAAATGTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACAGTCTTCTGGTGTTGACCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAGGCTACGCTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGGAAAGTTTATTTCATCAAAACTA  <  SRR13385771.470365/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                                      
CCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGGACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCAGTCTGGCCGCATTTTTGACAGCGATCTTTTTTTGTATCAAGACTTCTTCCAATGTCAGGATTTA‑T‑TTTCATGATGTATGGGTGTATCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAGAGAATGCTATGGAAAATA‑‑ATA‑‑TGTAGCAACATAGCCAACTAATTGCCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAAGTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGGAAAGTTTATTTCATCAAAACTA  >  BK006934/382903‑383488

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑