Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 6054 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGGACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCAGTCTGGCCGCATTTTTGACAGCGATCTTTTTTTGTATCAAGACTTCTTCCAATGTCAGGATTTATTTTCATGATGTATGGGTGTATCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAGAGAATGCTATGGAAAATAATA‑‑TGT‑‑AGCAACATAGCCAACTAATTGCCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAAGTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGG  >  BK006934/382902‑383466
                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                
CCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTTTTGGTACGATGCAGCGTCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCTAGACTTCTACCAATGTCATGATTTATTTTTCATGAGTTATGGGTGTTTCTGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAA                                                                                                                                                                                                                                                                              >  SRR13385772.314700/1‑300 (MQ=60)
                       ATACCGTCGACCAACTCAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTATGCACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACCGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTT                                                                                                                                                                                                                                                      <  SRR13385772.263075/301‑1 (MQ=60)
                                   gggggggggggggggggggggggggggggggggggcgcgggagggggcggggcgccggctgagcatacgcgcgggTGGTACGGTGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATAGTGTTTTGTATCAAGACTTCTACCAATGTCAGGATTTCTTTTTCATGACGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTCTTTTGCCGTTTGTGACAAAGAATGCTATGGCAACTAATATGTGT‑‑AGCAACATAACCAATTAATTATCCTTGCATTACATTTTGGCCGTACTATT                                                                                                                                                                                                                                          >  SRR13385772.90668/76‑301 (MQ=60)
                                   AACTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATT                                                                                                                                                                                                                                          >  SRR13385772.90686/1‑301 (MQ=60)
                                     CTAAACCGTCAGCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGCTGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTT                                                                                                                                                                                                                                         >  SRR13385772.197390/1‑300 (MQ=60)
                                                GCGTTGCCGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGT                                                                                                                                                                                                                             >  SRR13385772.487172/1‑301 (MQ=60)
                                                       CGCACCGACGAACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCCGTACTATTTACAATGCCATGTTTTATGT                                                                                                                                                                                                                      >  SRR13385772.230780/1‑301 (MQ=60)
                                                                                      TCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCTGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGT                                                                                                                                                                                       >  SRR13385772.444493/1‑301 (MQ=60)
                                                                                               GAACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCC                                                                                                                                                                                <  SRR13385772.1005386/299‑1 (MQ=60)
                                                                                                AACATACGCACTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTGACAGTAGTTTATTGACATTCTTCTGTTGTTGCCCGCT                                                                                                                                                                             >  SRR13385772.247823/1‑301 (MQ=60)
                                                                                                     ACGCACTGGTGGTACGATGCAGCGGCGGTCGGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCGACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCT                                                                                                                                                                        <  SRR13385772.1258953/301‑1 (MQ=60)
                                                                                                         CCTGTTGGTACGATGCAGCGGCGGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCT                                                                                                                                                                    <  SRR13385772.852437/301‑1 (MQ=60)
                                                                                                               GGTACGATGCAGCGGCGGTCTGACTGCTTGTGTGACAGGTATATTTGTTTGTATCAAGACTTCTACCAATGTCAGGATTTATGTGTCATGATGTATGGGTGTCTCGGATGTTCGTATGTCACTGTCTTTTATGTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACAGAACCAATTAATTATCATGGCATTAAATTGTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTAGTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAA                                                                                                                                                               <  SRR13385772.1212270/300‑1 (MQ=60)
                                                                                                                       GCCGCGGCGGTCTGACTGCATTTTTTACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAAT                                                                                                                                                      <  SRR13385772.62339/301‑1 (MQ=60)
                                                                                                                          GCGGCTGTCTGACTGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATT                                                                                                                                                   <  SRR13385772.787621/301‑1 (MQ=60)
                                                                                                                                     actGCATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTC                                                                                                                                        >  SRR13385772.1105420/4‑301 (MQ=60)
                                                                                                                                         CATTTTTGACAGCGATATTTTTTTGTATCAAGACTTCTACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACA                                                                                                                                     >  SRR13385772.788077/1‑300 (MQ=60)
                                                                                                                                                             TTTTGTATCAAGACTTCTACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGA                                                                                                                 <  SRR13385772.1123672/300‑1 (MQ=60)
                                                                                                                                                                    TCAAGACTTCTACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACT                                                                                                                                                                                                                                             >  SRR13385772.499474/1‑169 (MQ=60)
                                                                                                                                                                         ACTTCTACCAATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAACTTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTGTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGAATCCATTTTGGTAT                                                                                                    >  SRR13385772.1076368/1‑301 (MQ=60)
                                                                                                                                                                                   ATGTCAGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGC                                                                                           >  SRR13385772.1004764/1‑300 (MQ=60)
                                                                                                                                                                                        AGGATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTTGCAGTACTATTTAAAATGTCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAATTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTT                                                                                     >  SRR13385772.203368/1‑301 (MQ=60)
                                                                                                                                                                                           ATTTATTTTTCATGATGTATGGGTGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCAT                                                                                  <  SRR13385772.1040294/301‑1 (MQ=60)
                                                                                                                                                                                                                    TGTCTCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAA                                                            >  SRR13385772.73706/1‑300 (MQ=60)
                                                                                                                                                                                                                          GGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTC                                                      >  SRR13385772.840424/1‑300 (MQ=60)
                                                                                                                                                                                                                                               TTTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTG                                >  SRR13385772.847964/1‑301 (MQ=60)
                                                                                                                                                                                                                                                TTTATTTTGAAGTTTGTGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTG                                <  SRR13385772.784674/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                GGACAAAGAATGCTATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGC               <  SRR13385772.635325/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                             TATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTACAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAACAAGTCAAAGCTACACTGGCATCCTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGG  >  SRR13385772.166611/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                             TATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGG  >  SRR13385772.713745/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                             TATGGAAAATAATATGTGT‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGG  >  SRR13385772.65103/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                 TAAAATAATA‑‑TGTGGAGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCT          <  SRR13385772.298479/289‑1 (MQ=60)
                                                                                                                                                                                                                                                                                               T‑‑AGCAACATAACCAATTAATTATCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAGTTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTACAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAACAGGATCCATTTTGGTATACAAATAGCATATTGCATAACTTAACTAAACAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCA       >  SRR13385772.893148/1‑278 (MQ=60)
                                                                                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                                                                
CCCTCCCCCTGGCGGAACCCATCATCCCGTCGAACAACTAAACCGTCAGCGTTGCCGCACCGACGGACGTCTCTCTAGAGGTCGTCTCTCCGTCTGAACATACGCACTGTTGGTACGATGCAGCGGCAGTCTGGCCGCATTTTTGACAGCGATCTTTTTTTGTATCAAGACTTCTTCCAATGTCAGGATTTATTTTCATGATGTATGGGTGTATCGGATGTTCGGATGTCACTGTCTTTTATTTTGAAGTTTGTGACAGAGAATGCTATGGAAAATAATA‑‑TGT‑‑AGCAACATAGCCAACTAATTGCCATTGCATTAAATTTTGGCAGTACTATTTAAAATGCCATGTTTTATGTTGTTACAGTAAGTTATTGACATTCTTCTGGTGTTGCCCGCTTCGCTTTCTTAAAACGGTTAAATATTGAAAAAGTTTCACAAGACACGAAATCAAAAAGGATCCATTTTGGTATAAAAATAGCATATTGCATAACTTAACTAAAAAGATTAAAAAAAGTCAAAGCTACACTGGCATACTTTGAACTGTTTTTTCAAAGCTGTCTCCACGTGG  >  BK006934/382902‑383466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: