Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AGAGTGAAAGTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGTCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTACGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCCTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTATTCTG‑AAAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAGAAGAAAGGGGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTCATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTC  >  BK006934/384573‑385164
                                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                                                            
AGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCT                                                                                                                                                                                                                                                                                                      >  SRR13385771.1141002/1‑301 (MQ=60)
        ACTAGCCGTTTCCACGGTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTT                                                                                                                                                                                                                                                                                              <  SRR13385771.1884351/301‑1 (MQ=60)
               GTTTCCACTTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTAGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTT                                                                                                                                                                                                                                                                                       >  SRR13385771.62348/1‑301 (MQ=60)
                 TTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAGTGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCAGCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTT                                                                                                                                                                                                                                                                                      <  SRR13385771.1370046/300‑1 (MQ=60)
                 TTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTT                                                                                                                                                                                                                                                                                      >  SRR13385771.896979/1‑300 (MQ=60)
                                        acgatttggacgttcatgatggtagttgagtttttttacagtcgaaacaaccatattcctgaaaggaaagggatgggtgtttccctatgtttataaattagaagaccaagtattcctttttaggcaattgaaaaccaaatttttttatccggTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACA                                                                                                                                                                                                                                                               <  SRR13385771.506194/148‑1 (MQ=60)
                                                                               AGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAA                                                                                                                                                                                                                      <  SRR13385771.1273934/301‑1 (MQ=60)
                                                                               AGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAA                                                                                                                                                                                                                       >  SRR13385771.1427495/1‑300 (MQ=60)
                                                                                  GGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGTTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAG                                                                                                                                                                                                                   <  SRR13385771.1799649/301‑1 (MQ=60)
                                                                                      ACAACCATATCCATAAAAGAAACGTTATGGTCGTTCCCGTAGTTTATTAAGTAAGATGAAAAATTATCCTTCTTTAGCCAATTGAAACCAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATTTTATTTTCGCACCGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTAACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAA                                                                                                                                                                                                              <  SRR13385771.1298925/301‑1 (MQ=60)
                                                                                        AACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAGGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAAC                                                                                                                                                                                                             >  SRR13385771.788680/1‑300 (MQ=60)
                                                                                          CCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAGTCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGT                                                                                                                                                                                                          <  SRR13385771.615305/301‑1 (MQ=60)
                                                                                          CCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGT                                                                                                                                                                                                          <  SRR13385771.515267/301‑1 (MQ=60)
                                                                                            ATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAACAGTAAATAATGTCTTCTG‑AAAAAAAAAAgagaaatgtc                                                                                                                                                                                                          >  SRR13385771.1659221/1‑290 (MQ=60)
                                                                                                    AATAGAAACGTGATTGTCGTTCCCGTAGTTTATTAAGTAATATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAATCTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCT                                                                                                                                                                                                <  SRR13385771.1476967/301‑1 (MQ=60)
                                                                                                    AAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCGATTGAAAATAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTAATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAGTAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGC                                                                                                                                                                                                 <  SRR13385771.777685/300‑1 (MQ=60)
                                                                                                    AAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCT                                                                                                                                                                                                <  SRR13385771.967999/301‑1 (MQ=60)
                                                                                                                         CCCGTAGTTTATTAAGTAAGATGACAAATTTTCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTT                                                                                                                                                                           <  SRR13385771.1883409/301‑1 (MQ=60)
                                                                                                                           CGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAACAAAGAGAACTGTGAACAATGCTTGATAGTATTAGGAATATATTA                                                                                                                                                                          >  SRR13385771.517916/1‑300 (MQ=60)
                                                                                                                               GTTTATTAAGTAAGATGAAAAATTATCCTTCTTTAGCCAATTGAAAACACAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGA                                                                                                                                                                     <  SRR13385771.1765219/301‑1 (MQ=60)
                                                                                                                                TTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAAAAATGCTTGATAGTTGTAGGAATATCTTAAAAGA                                                                                                                                                                     >  SRR13385771.1375361/1‑300 (MQ=60)
                                                                                                                                                                 AGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTATGAATATCTTAAAAGAAAGGAAATAGATTAACTGGAAAATgtttttaat                                                                                                                                    >  SRR13385771.1344690/1‑291 (MQ=60)
                                                                                                                                                                    CAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGATTAATAGTTGTAGGAATATCTTAAAAGAAAGGAAATAGCTTATCTCGAAAATCTTTTGAATAAA                                                                                                                                 >  SRR13385771.1252438/1‑300 (MQ=60)
                                                                                                                                                                        TGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCCTAAAAGAAAGGAGATAGATTATCAGGAAAAccgattgagatcggaca                                                                                                                             >  SRR13385771.880190/1‑283 (MQ=60)
                                                                                                                                                                                AAACTTCTTAAGCGGTTTCCAATGGTTTAAAGTCGCTCATATGTTCAGGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCGTATTTTCGCAACGCTGCGTGTTTAGGCTTTGCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAAGATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAATAACCAGTA                                                                                                                    <  SRR13385771.1351451/301‑1 (MQ=60)
                                                                                                                                                                                         AATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTAATAGTAGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAAAACCAGACATTTATTCG                                                                                                           >  SRR13385771.1717700/1‑301 (MQ=60)
                                                                                                                                                                                         AATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGATTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAACCAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCG                                                                                                           <  SRR13385771.1385345/301‑1 (MQ=60)
                                                                                                                                                                                           TCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTT                                                                                                         >  SRR13385771.1897153/1‑301 (MQ=60)
                                                                                                                                                                                            CTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGATTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATTAAATAAGAATCAGTAATTTATTCGTTT                                                                                                        >  SRR13385771.796204/1‑301 (MQ=60)
                                                                                                                                                                                              GTTTCCAATGTTTTAAAGTCGCTCTTATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTT                                                                                                         <  SRR13385771.596121/298‑1 (MQ=60)
                                                                                                                                                                                              GTTTCAAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGGGACGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGATTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑‑AAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTA                                                                                                       <  SRR13385771.461005/299‑1 (MQ=60)
                                                                                                                                                                                              GTTGCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAA                                                                                                      <  SRR13385771.759085/301‑1 (MQ=60)
                                                                                                                                                                                               TTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAA                                                                                                      >  SRR13385771.1377256/1‑300 (MQ=60)
                                                                                                                                                                                                                                     CTTCTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTG                                                               >  SRR13385771.638640/1‑301 (MQ=60)
                                                                                                                                                                                                                                          CCATGGGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTG                                                           <  SRR13385771.1749430/300‑1 (MQ=60)
                                                                                                                                                                                                                                           CATGGGAGGGTTCTATGAAAAGCATCATCTTATTTTCGAAACGCTGCGGGTTTAGGATTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTGAAAAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTG                                                           <  SRR13385771.1382760/301‑1 (MQ=60)
                                                                                                                                                                                                                                             TGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACAGTGAACAAAGCTTGATAGCTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGAAATTTAATCGTATAAATTGGAAAAACAAAAAATAAAAGAATCAGCAATGTCTTGGTTTCCTG                                                       >  SRR13385771.93652/1‑301 (MQ=60)
                                                                                                                                                                                                                                              GAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGT                                                      <  SRR13385771.259013/301‑1 (MQ=60)
                                                                                                                                                                                                                                                    GTTCTATGAAAAGCATGATATTATTTTCGGAACGCTGCGCGTTTAGGCTATTCCGCTAGTCTCTTTTCTGTGTACAGTTCTGACCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAATAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGT                                                <  SRR13385771.339540/301‑1 (MQ=60)
                                                                                                                                                                                                                                                    GTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACAT                                                                                    <  SRR13385771.645176/265‑1 (MQ=60)
                                                                                                                                                                                                                                                         ATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGATTAGGCTTTTCCACTAGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGAAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAACAGAAATGTGAACAAAACTAGATAGTTGAAGCAAAATCTTAAAAGCAAGGAGATAGATTATATGGAAAATCGTTTAAATAAAATAAAAACCAGTAAATTATTAGTTTAAATTAGAAAAACAAAACATAAAACAACCAGCAATGTCTTGGTTCCCTGATAAATTAAAA                                            >  SRR13385771.1450931/1‑300 (MQ=60)
                                                                                                                                                                                                                                                              AAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTACATAATGTCTTCTG‑‑‑AAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGCTAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACACAACATAAAAGAACCAGAAATGTCTTGGTTGCCTGTTAATATAAAAAGctatc                                     >  SRR13385771.1769432/1‑296 (MQ=60)
                                                                                                                                                                                                                                                                        TTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAACACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAA                                >  SRR13385771.547303/1‑297 (MQ=60)
                                                                                                                                                                                                                                                                         TATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGATGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGAT                            <  SRR13385771.395464/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                              TTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCACGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGATGTAGGAATATCTTAAAAGAAAGGCGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTAGTTTACATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAACAGATGACAGatcggcagagaacacgt      >  SRR13385771.221494/1‑284 (MQ=60)
                                                                                                                                                                                                                                                                                                  GCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTC  <  SRR13385771.448596/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                                                                            
AGAGTGAAAGTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGTCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTACGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCCTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTATTCTG‑AAAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAGAAGAAAGGGGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTCATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTC  >  BK006934/384573‑385164

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑