Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	6081	0.0	0	0.0%	0	0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output

TTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTATTCTGAAAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAGAAGAAAGGGGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTCATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATCTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCTAGTCATTCCTTACTACATTTTATTGTAACTCTTCAGTAGAGCTAACCACAGTCATTCCTTAATATTTTTTAACACAGATCTCTTTCACAGAGTAGA  >  BK006934/384888‑385476

TTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTA                                                                                                                                                                                                                                                                                                  <  SRR13385771.55368/300‑1 (MQ=60)

 TACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGCCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTACAAAGTTCTCCCCAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATACGAGGAAACTTATTTAAT                                                                                                                                                                                                                                                                                                >  SRR13385771.432160/1‑301 (MQ=60)

            CCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAAACAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGACTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCAT                                                                                                                                                                                                                                                                                     <  SRR13385771.215685/301‑1 (MQ=60)

                ATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTT                                                                                                                                                                                                                                                                                 <  SRR13385771.503546/301‑1 (MQ=60)

                 TGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATATTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAACAGGAAACTTATTTAATGTTTCATTCCTTCTTC                                                                                                                                                                                                                                                                                >  SRR13385771.1644327/1‑301 (MQ=60)

                      ACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATCGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCATCTT                                                                                                                                                                                                                                                                           >  SRR13385771.1537385/1‑301 (MQ=60)

                      ACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTT                                                                                                                                                                                                                                                                           >  SRR13385771.557016/1‑301 (MQ=60)

                            ACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTT                                                                                                                                                                                                                                                                     >  SRR13385771.567988/1‑301 (MQ=60)

                             ATTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATATTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTA                                                                                                                                                                                                                                                                    <  SRR13385771.166074/301‑1 (MQ=60)

                                   GAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGAT                                                                                                                                                                                                                                                              <  SRR13385771.419982/301‑1 (MQ=60)

                                      AAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCATCTTCTGCTTATTCGATGTC                                                                                                                                                                                                                                                           >  SRR13385771.1125499/1‑301 (MQ=60)

                                       AGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCT                                                                                                                                                                                                                                                          >  SRR13385771.313975/1‑301 (MQ=60)

                                       AGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCT                                                                                                                                                                                                                                                          >  SRR13385771.1577488/1‑301 (MQ=60)

                                              AATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAA                                                                                                                                                                                                                                                   <  SRR13385771.1572585/301‑1 (MQ=60)

                                                 GTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAA                                                                                                                                                                                                                                                 <  SRR13385771.287915/300‑1 (MQ=60)

                                                         GAAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGT                                                                                                                                                                                                                                         <  SRR13385771.655627/301‑1 (MQ=60)

                                                                   AGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCA                                                                                                                                                                                                                                >  SRR13385771.527375/1‑300 (MQ=60)

                                                                        ACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCG                                                                                                                                                                                                                          >  SRR13385771.1516687/1‑301 (MQ=60)

                                                                         CTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCG                                                                                                                                                                                                                          >  SRR13385771.1102892/1‑300 (MQ=60)

                                                                          TGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCATCTTCTGCTTAT                                                                                                                                                                                                                                                                   >  SRR13385771.1548818/1‑258 (MQ=60)

                                                                                                              AAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAAT                                                                                                                                                                                    >  SRR13385771.1563468/1‑301 (MQ=60)

                                                                                                                              TATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTC                                                                                                                                                                     <  SRR13385771.1187159/300‑1 (MQ=60)

                                                                                                                                   GGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACT                                                                                                                                                                <  SRR13385771.711566/300‑1 (MQ=60)

                                                                                                                                   GGAAAATAGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGACTATACTGTTTCAATTCCAACT                                                                                                                                                                >  SRR13385771.595627/1‑300 (MQ=60)

                                                                                                                                                          AAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATT                                                                                                                                        <  SRR13385771.1663260/301‑1 (MQ=60)

                                                                                                                                                                     TTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAAT                                                                                                                             >  SRR13385771.958371/1‑301 (MQ=60)

                                                                                                                                                                         TCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTAT                                                                                                                          <  SRR13385771.1619114/300‑1 (MQ=60)

                                                                                                                                                                               AAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTTATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCG                                                                                                                   >  SRR13385771.1387167/1‑301 (MQ=60)

                                                                                                                                                                                  TTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAA                                                                                                                                                                                             >  SRR13385771.407227/1‑224 (MQ=60)

                                                                                                                                                                                            AAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTA                                                                                                       >  SRR13385771.1088577/1‑300 (MQ=60)

                                                                                                                                                                                                 ATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCT                                                                                                  >  SRR13385771.737283/1‑300 (MQ=60)

                                                                                                                                                                                                       GAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCTAGTCATT                                                                                           >  SRR13385771.752996/1‑301 (MQ=60)

                                                                                                                                                                                                           CAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCA                                                                                                                                                         >  SRR13385771.943810/1‑235 (MQ=60)

                                                                                                                                                                                                               AATGTCTTGGTGGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCTAGTCATTCCTTACTA                                                                                   <  SRR13385771.26284/301‑1 (MQ=60)

                                                                                                                                                                                                                   TTTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCTTACTCGGTATATAAGAGGAATCTGATTTAATGGTTCAGTCATTCTTCCTCTTCTGCTTATTCGATGTCGATTGAAAAACTTCAAGTAAACCAGCAATATCTACTTCCATTAATTAGACAGCGAGCCTGAAACAAAGAATATACTGTTGCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCTAGTCATTCCTTACTACAT                                                                                <  SRR13385771.326027/300‑1 (MQ=60)

                                                                                                                                                                                                                      TGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCTAGTCATTCCTTACTACATTTT                                                                             <  SRR13385771.8560/300‑1 (MQ=60)

                                                                                                                                                                                                                               GTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGGTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCTAGTCATTCCTTACTACATTTTATTGTAAC                                                                     <  SRR13385771.1586757/299‑1 (MQ=60)

                                                                                                                                                                                                                                   ATGTAAAAAGTTCTCCCAAAAGATTACAGTAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATGCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCTAGTCATTCCTTACTACATTTTATTGTAACTCTTCA                                                               <  SRR13385771.72581/301‑1 (MQ=60)

                                                                                                                                                                                                                                     GTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCTAGTCATTCCTTACTACATTTTATTGTAACTCTTCAGT                                                             >  SRR13385771.850902/1‑301 (MQ=60)

                                                                                                                                                                                                                                       AAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATT                                                                                                                       <  SRR13385771.1389491/241‑1 (MQ=60)

                                                                                                                                                                                                                                                TCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTTATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCTACTTCCATTAAGTAGACAGCTAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCTAGTCATTCCTTACTACATTTTATTGTAACTCTTCAGTAGAGCTAACC                                                   >  SRR13385771.522993/1‑300 (MQ=60)

                                                                                                                                                                                                                                                  CCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCTAGTCATTCCTTACTACATTTTATTGTAACTCTTCAGTAGAGCTAACCAC                                                 >  SRR13385771.439375/1‑300 (MQ=60)

                                                                                                                                                                                                                                                           GACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCTAGTCATTCCTTACTACATTTTATTGTAACTCTTCAGTAGAGCTAACCACAGTCATTCCT                                       <  SRR13385771.943346/301‑1 (MQ=60)

                                                                                                                                                                                                                                                                              CATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCTAGTCATTCCTTACTACATTTTATTGTAACTCTTCAGTAGAGCTAACCACAGTCATTCCTTAATATTTTTTAACACAGA                    <  SRR13385771.131021/301‑1 (MQ=60)

                                                                                                                                                                                                                                                                                GACTCGTTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTTAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCTAGTCATTCCTTACTACATTTTATTGTAACTCTTCAGTAGAGCTAACCACAGTCATTCCTTAATATTTTTTAACACAGATC                  <  SRR13385771.1029192/301‑1 (MQ=60)

                                                                                                                                                                                                                                                                                   CCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCTAGTCATTCCTTACTACATTTTATTGTAACTCTTCAGTAGAGCTAACCACAGTCATTCCTTAATATTTTTTAACACAGATCTCT               <  SRR13385771.1120300/301‑1 (MQ=60)

                                                                                                                                                                                                                                                                                         TATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTATACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCTAGTCATTCCTTACTACATTTTATTGTAACTCTTCAGTAGAGCTAACCACAGTCATTCCTTAATATTTTTTAACACAGATCTCTTTCAC          >  SRR13385771.1764167/1‑300 (MQ=60)

                                                                                                                                                                                                                                                                                                 GAAACTTCTTTAATGTTTCATTCATTCTTCATCTTCTGCTTCTTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTACCATTAAGTAGACAGCGAGCCTGAACCAAAGAATATACTGTTTCAATACCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTATTAAGCTAACTATAGTCATTACTTACTACATTTTATTGTACCTATTCAGTAGAGCTAACCACAGTCATTCATTAATATTTTTTAACACAGATCTCTATCACAGCGTAGA  >  SRR13385771.1736458/1‑300 (MQ=60)

TTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTATTCTGAAAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAGAAGAAAGGGGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTCATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATCTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAAACTTCAAGTAAACCAGCAATATCGACTTCCATTAAGTAGACAGCGAGCCTGAAACAAAGAATATACTGTTTCAATTCCAACTAAAGCCACTCCCTCAAGCGTTATTATTTTTTGAATTATATTTTCGGGTTTTAAGCTAACTCTAGTCATTCCTTACTACATTTTATTGTAACTCTTCAGTAGAGCTAACCACAGTCATTCCTTAATATTTTTTAACACAGATCTCTTTCACAGAGTAGA  >  BK006934/384888‑385476

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`