Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	6081	0.0	0	0.0%	0	0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output

ATGCAATATGGTCCTTATCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAAGGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATTTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATGAAAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCATCCCCTTCCATTTATCAGCATGATATTTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAAAAAAGTT  >  BK006939/337172‑337755

ATGTAATATGGTTCTTATCGGACTTTGTCAAAACCTTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCCCACAGTCCAAACGCGGTCAACGAGTCAGGACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATAAAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAA                                                                                                                                                                                                                                                                                              <  SRR13385771.670558/301‑1 (MQ=60)

          GTCCTTATCGGACTTTGTCAAAACATTAGTCTCTAGAATGTGTGAATCCGCCATTGACATCCTCCACCCTTGCATTGCACACAGTCCAAACTCGGTCAACGAGTCATCACCGGTGTTGCTCTCTGTATCAATGACCGGGTTTTATAGAATTTGTCCCAGTGTTCTTTTTCTGGTTCTCTATATGTTATACAACAAGGGAATATGCAAAGTCCTAGTGATGTTATTAATCTGAAAACTACTATCGCGAACGAATAGTTATAATTAATCATTG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTAC                                                                                                                                                                                                                                                                                    <  SRR13385771.1446485/301‑1 (MQ=60)

          GGCCTTATCGGAGTTTGTCAAAACATTAGTCTCTAGAAGTTGTGAATCCTCCATGGACATCCGCCACCCTTTCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTGTTCTTTTTCTGGTTCTCTATATGTTATTCAACAATGGAATAGTCAAAATCCTAGTGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTAC                                                                                                                                                                                                                                                                                    <  SRR13385771.762133/301‑1 (MQ=60)

            CCTTTTCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAACCGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAA                                                                                                                                                                                                                                                                                  <  SRR13385771.207532/301‑1 (MQ=60)

                           TCAAAACATTAGGCTCTAGAATGTGTGAAGCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGTGTGGCTCTCTTGATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC                                                                                                                                                                                                                                                                    <  SRR13385771.1789394/300‑1 (MQ=60)

                                 CATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGT                                                                                                                                                                                                                                                            >  SRR13385771.1763665/1‑301 (MQ=60)

                                 CATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCCCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACACCAACTAATATAAAC‑TAATTGT                                                                                                                                                                                                                                                            >  SRR13385771.154537/1‑301 (MQ=60)

                                              AATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTCGATAAC                                                                                                                                                                                                                                                  >  SRR13385771.694734/1‑298 (MQ=60)

                                              AATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTACTTTATAACAT                                                                                                                                                                                                                                                >  SRR13385771.579305/1‑300 (MQ=60)

                                                                          CACCCTTTCATTGCACACAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCGCTCTTTATCAATTACCGTTTTTGATAGAATTTGTCCCATTTTTCTTTGTCTTGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTATGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAG                                                                                                                                                                                                                  <  SRR13385771.1029919/301‑1 (MQ=60)

                                                                             CCTTGCATTGCACCCAGTCCAAACGCGGTCAACGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAG                                                                                                                                                                                                               <  SRR13385771.1336150/301‑1 (MQ=60)

                                                                                                             GGAGTCAGCACCGGAATGGCTGTGTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAAAAATGGAATAGTCAGAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACA                                                                                                                                                                               <  SRR13385771.576691/301‑1 (MQ=60)

                                                                                                                                         TCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGACTTTTTTTTATTTATTTTTCAAGAACAAAACAGAAGTCTATATAATTAGCACTAT                                                                                                                                                   >  SRR13385771.30123/1‑301 (MQ=60)

                                                                                                                                              TACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑‑AAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTACAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATC                                                                                                                                             >  SRR13385771.1145815/1‑301 (MQ=60)

                                                                                                                                                 CGGGGTTGATAGAATTTTGCTCATTTTTGTTTTTCTGGTTCTCTATAGGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGGTATTAATCTGAAAACTACTATCTCGAACGAATAGTTAGAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTTTCCTTTATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACGATAATATCCA                                                                                                                                           <  SRR13385771.1724484/301‑1 (MQ=60)

                                                                                                                                                          aagtATTTGTACCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAAAAATGGAATAGTAAAAATCCTAGGGATGTTATTAAACGGAAAACTAATAACTCGAAAGAATAGTTATAATTAATCAATGAAAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAAT                                                                                                                                   <  SRR13385771.248335/297‑1 (MQ=60)

                                                                                                                                                               TTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTTTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTACAGAAAAAAACAGAAGTCTATATACTTAGCACTATAATTACCAGTTTCAATTTGCTT                                                                                                                             >  SRR13385771.768743/1‑301 (MQ=60)

                                                                                                                                                                          TTTCTTTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGATGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAATTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCC                                                                                                                  >  SRR13385771.603740/1‑301 (MQ=60)

                                                                                                                                                                               TTTTCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATGATTAATCTATG‑AAAAAAAAAAGAAAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACT                                                                                                                                                            <  SRR13385771.841464/254‑1 (MQ=60)

                                                                                                                                                                                  TCTGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGC                                                                                                          >  SRR13385771.147500/1‑301 (MQ=60)

                                                                                                                                                                                    TGGTTCTCTATATGTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGATTCCGAATTGGCTG                                                                                                        >  SRR13385771.1012519/1‑301 (MQ=60)

                                                                                                                                                                                                 GTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTT                                                                                           >  SRR13385771.887756/1‑301 (MQ=60)

                                                                                                                                                                                                   TATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTT                                                                                          <  SRR13385771.737779/300‑1 (MQ=60)

                                                                                                                                                                                                    aaaaacaaacggaatagtcaaaatcttagggtggttattaatgggaaaacaccaacccggaacaataAGTTATAATTAATCAAT‑AAAAAAAAAAAGAGAAAGTAAAAAAGGTTA‑AACAACTTATAATCACTTAATGGTCC‑TGGTTACAAAACTTTGTTGAAGTTTTATCCGGTGGGGAGGGGGTTGAA‑TTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACC                                                                                       <  SRR13385771.794927/234‑1 (MQ=60)

                                                                                                                                                                                                      AGAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAAGCAA‑GGAAAAAAAAAAGAGGAAGTAAAAGATGTTACAACAACTAATATACAC‑TAATGGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTAGTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACC                                                                                       <  SRR13385771.1042528/300‑1 (MQ=60)

                                                                                                                                                                                                         ACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCAGAAAACTACTATCTCGAACGAATAGTTAGAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGGTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCC                                                                                   <  SRR13385771.1078666/301‑1 (MQ=60)

                                                                                                                                                                                                                         AATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCAT                                                                           >  SRR13385771.1321800/1‑293 (MQ=60)

                                                                                                                                                                                                                               AGTGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATAGACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTAGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCGGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCGTCCATTTATCAGCATGAT                                                              <  SRR13385771.1025182/300‑1 (MQ=60)

                                                                                                                                                                                                                                     GTTATTAATCGGAAAAATACTAACTCGAACGAATAGTTAAAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATATTTTT                                                        <  SRR13385771.63437/300‑1 (MQ=60)

                                                                                                                                                                                                                                              CGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAAT                                             <  SRR13385771.1035858/301‑1 (MQ=60)

                                                                                                                                                                                                                                                                   GAATAGTTATAATTAATCAATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑‑TTTTTTTTTAGAATAATCCTTTCACTCGTTGAAGT                        >  SRR13385771.547274/1‑300 (MQ=60)

                                                                                                                                                                                                                                                                                     AATG‑AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAA       >  SRR13385771.1353967/1‑300 (MQ=60)

                                                                                                                                                                                                                                                                                          AAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCACCCCCTTCCATTTATCAGCATGATA‑TTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAGAAAAGTT  >  SRR13385771.713054/1‑301 (MQ=60)

ATGCAATATGGTCCTTATCGGACTTTGTCAAAACATTAGGCTCTAGAATGTGTGAATCCTCCATTGACATCCGCCACCCTTGCATTGCACACAGTCCAAACGCGGTCAAGGAGTCAGCACCGGAGTGGCTCTCTTTATCAATTACCGGGTTTGATAGAATTTGTCCCATTTTTCTTTTTCTGGTTCTCTATATTTTATACAACAATGGAATAGTCAAAATCCTAGGGATGTTATTAATCGGAAAACTACTATCTCGAACGAATAGTTATAATTAATCAATGAAAAAAAAAAAGAGAAAGTAAAAAATGTTACAACAACTAATATACAC‑TAATTGTCCTTGATAACAGAAC‑TTGTTGTAGTTTTATTCCGTGGGGAGGAGGGTGAATTTTTTTTATTTAGTTTTAAAGAACAAAACAGAAGTCTATATACTTAGCACTATAATATCCAGTTTCAATTTGCTCTGTCAGAATCCGAATTGGCTGGTTTTCTTTGTTTTACCATCCCCTTCCATTTATCAGCATGATATTTTTTTTTTTAGAATAATCCTTTCAATCGTTGAAGTAGTTTGTGGGAAAAAAAAAGTT  >  BK006939/337172‑337755

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 10 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`