Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ACTGCAATATTTGCAAATTCAACCGTAAATCCTCATGATTTGCAAAACAGAATGTTTCCATTTCTGAAGAAAATTAACGAGGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATTTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGCGGGATACT  >  BK006942/326589‑327172
                                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                                         
ACTGCAATATTTGCAAATTCAACCGTAAATCCTCATGATTTGCAAAACAGAATGTTTCCATTTCTGAAGAAAATTAACGAAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAACAAACGCAT                                                                                                                                                                                                                                                                                             >  SRR13385771.1076642/1‑301 (MQ=60)
     AATATTTGCAAATTCAACCGTAAATCCTCATGATTTGCAAAACAGAATGTTTCCATTTCTGAAGAAAATTAACGAAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACC                                                                                                                                                                                                                                                                                         >  SRR13385771.1482775/1‑300 (MQ=60)
             CAAATTCAAACGTAAATCCTAATGATTTGCAAAACAGAATGTTTCCATTTCTGACGCAAATTAACGAAGAATCAAAAACTGTAAAGAGCCCTATTATCACAGACATGACAACTGAAGAGGAAGTTCAGGCACCCGAGGTTGATATGGAATCATAAAACTTTAATGGTAAATATTGGTCCAACTGGAAAAGGATGAGCAAAGGAAGAGGAATTGTTTTAACTATTGCTGAAAAGGATGTTCATTTATTTTTGAAACAGTAGAAAGTGATGGAATCTTCACAAAACGACTTACCATTCCAAA                                                                                                                                                                                                                                                                                 >  SRR13385771.668371/1‑300 (MQ=60)
             AAAATTCAACCGTAAATCCTCATGATTTGCAAAACAGAATGTTTCCATTTCTGAAGAAAATTAACGAAGAATCCAAAACTGTAATGTGGCCTATTATCACTGACATGACAACTGGAGAGGCAGTTCCGGTACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGTTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCAGTCCAAAT                                                                                                                                                                                                                                                                                <  SRR13385771.330326/301‑1 (MQ=60)
                                 CATGATTTGCAAAACAGAATGTTTCCATTTCTGAAGAAAATTAACGAAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAA                                                                                                                                                                                                                                                             >  SRR13385771.618078/1‑300 (MQ=60)
                                             AACAGAATGTTTCAATTTCTGAAGAAAATTAACGAAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGAACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAACGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGCTGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCAAGGGAAATGAACTATAAGCAGAGT                                                                                                                                                                                                                                                >  SRR13385771.1266136/1‑301 (MQ=60)
                                                        TCCATTTCTGAAGAAAATTAACGAAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGATCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTCTTGTTTTAACTATTGCTGAACAGAATGTTCCTTTCTTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAACTAGTACCCACGGTAAATCAACTATCAGCAGCGCCTATTGCTAA                                                                                                                                                                                                                                      >  SRR13385771.1278681/1‑300 (MQ=60)
                                                         CCATTTCTGAAGAAAATTAACGAAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAA                                                                                                                                                                                                                                    <  SRR13385771.1547050/301‑1 (MQ=60)
                                                           ATTTCTGAAGAAAATTAACGAAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGCAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAACCAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATT                                                                                                                                                                                                                                  >  SRR13385771.333779/1‑301 (MQ=60)
                                                                       AATTAACGAAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGC                                                                                                                                                                                                                       >  SRR13385771.848273/1‑300 (MQ=60)
                                                                             CGAAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAAT                                                                                                                                                                                                                                                                                <  SRR13385771.472020/237‑1 (MQ=60)
                                                                               AAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAAC                                                                                                                                                                                                              <  SRR13385771.1760424/301‑1 (MQ=60)
                                                                                  AATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGG                                                                                                                                                                                                            >  SRR13385771.95767/1‑300 (MQ=60)
                                                                                                ATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATCTCTGAGACCGCTAACGAAAAGGAACAAAGGGTCTACT                                                                                                                                                                                             >  SRR13385771.133711/1‑301 (MQ=60)
                                                                                                    GGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTCGT                                                                                                                                                                                         >  SRR13385771.1492118/1‑301 (MQ=60)
                                                                                                         ATTAGCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACT                                                                                                                                                                                    <  SRR13385771.38231/301‑1 (MQ=60)
                                                                                                                     ATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGCATCATCAACCTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAACGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTTTCCACGGGAACTGAACTATCCGCAGAGTCTATTGCTAAAATTTCTGAGACAGCTAAAGAAACGGAACAAAGGGCCTACTTAGTAGACTGCTCGACAGTG                                                                                                                                                                         >  SRR13385771.1417790/1‑300 (MQ=60)
                                                                                                                                      AGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGGGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGTAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCT                                                                                                                                                       <  SRR13385771.1535321/301‑1 (MQ=60)
                                                                                                                                                   GAGGTTGATATGGAATCATCAAACTTTAATGGTAACTGTTTGTCCAACTGGAATAGGTTGAGCAAAGGAAGATGTTTTGTTTTAACTATTGCTGAAAAGGATGTGCCTTTATTTTTGAAACAGGTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAA                                                                                                                                                                                                          <  SRR13385771.320986/237‑1 (MQ=60)
                                                                                                                                                        TGATATGGAATCATCAAACTTTAATGGTAACTTTGGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACTGAACAAAGGGTCTACTTAGTAGACTTCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTT                                                                                                                                      <  SRR13385771.1264389/300‑1 (MQ=60)
                                                                                                                                                           TATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTT                                                                                                                                  >  SRR13385771.1249251/1‑301 (MQ=60)
                                                                                                                                                            ATGGAATCATCAAACTTTAATGGTAACGTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTT                                                                                                                                  <  SRR13385771.1358746/300‑1 (MQ=60)
                                                                                                                                                             TGTAATCATAAAACTTTAATTGTAACTTTTGGTCCAACTTGAATAGGTTGAGCAAAGGAAGTGGTTGTGTTTTAACTATTTCTGAAAAGGATGTGCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAGATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTC                                                                                                                                 <  SRR13385771.1533185/300‑1 (MQ=60)
                                                                                                                                                              GGAATCATCAAACTTTAATGGTAACTTTTGGTCAAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACAGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTAGCTAATACATACATTTCTTTTTTTCC                                                                                                                                >  SRR13385771.599138/1‑300 (MQ=60)
                                                                                                                                                                                  GTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTT                                                                                                           <  SRR13385771.1782241/301‑1 (MQ=60)
                                                                                                                                                                                          TGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGTAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAAC                                                                                                    <  SRR13385771.604670/300‑1 (MQ=60)
                                                                                                                                                                                                      AATAGGTTGAGCAAAGGAAGATGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAAT                                                                                       <  SRR13385771.400401/301‑1 (MQ=60)
                                                                                                                                                                                                                       AAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTTATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGC                                                                       >  SRR13385771.1066958/1‑300 (MQ=60)
                                                                                                                                                                                                                             TTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATAC                                                                                     <  SRR13385771.737346/280‑1 (MQ=60)
                                                                                                                                                                                                                                   TTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCG                                                          >  SRR13385771.1663887/1‑301 (MQ=60)
                                                                                                                                                                                                                                     TAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCCGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGACACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTAGTTCAACACATTTGACGAATAAATTTTGTTGGATGCAGACGTAGTACCATT                                                        >  SRR13385771.647926/1‑301 (MQ=60)
                                                                                                                                                                                                                                            TGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTGGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTGTGTTGGATGCAGACGTAGTACCGTTTGTAGG                                                  <  SRR13385771.756412/300‑1 (MQ=60)
                                                                                                                                                                                                                                             GCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCGAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAAGTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCTACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGT                                                <  SRR13385771.756594/301‑1 (MQ=60)
                                                                                                                                                                                                                                                 AAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGCATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGCAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTG                                             >  SRR13385771.223208/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                TATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGTTCCCCACTTTTTTAAACACATTTAAAAATTACATTTTGTTGaatcagaccgtattcccgtttgtagggtcggtttcttttttcgcccc                             >  SRR13385771.1414949/1‑254 (MQ=60)
                                                                                                                                                                                                                                                                     TTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGCACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTT                        >  SRR13385771.669471/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                  AAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAG             >  SRR13385771.1847831/1‑299 (MQ=60)
                                                                                                                                                                                                                                                                                      GATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGG       >  SRR13385771.1100820/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                           AATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACT  >  SRR13385771.125487/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                                         
ACTGCAATATTTGCAAATTCAACCGTAAATCCTCATGATTTGCAAAACAGAATGTTTCCATTTCTGAAGAAAATTAACGAGGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATTTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGCGGGATACT  >  BK006942/326589‑327172

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑