Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 6054 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATCCTACTGCAATATTTGCAAATTCAACCGTAAATCCTCATGATTTGCAAAACAGAATGTTTCCATTTCTGAAGAAAATTAACGAGGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATTTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCC  >  BK006942/326584‑327148
                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                 
ATCCTACTGCAATATTTGCAAATTCAACCGTAAATCCTCATGATTTGCAAAACAGAATGTTTCCATTTCTGAAGAAAATTAACGAAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGCAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAA                                                                                                                                                                                                                                                                           >  SRR13385772.998291/1‑300 (MQ=60)
                   AAATTCAACCGTAAATCCTCATGATTTGCAAAACAGAATGTTTCCATTTCTGAAGAAAATTAACGAAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTACTGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAAT                                                                                                                                                                                                                                                        >  SRR13385772.1123814/1‑300 (MQ=60)
                                AATCCTCATGATTTGCAAAACAGAATGTTTCCATTTCTGAAGAAAATTAACGAAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAA                                                                                                                                                                                                                                          <  SRR13385772.501630/301‑1 (MQ=60)
                                          ATTTGCAAAACAGAATGTTTCCATTTCTGAAGAAAATTAACGAAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATAAAACTTTACTGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATACTATCCAAGGGCAATGAACTATC                                                                                                                                                                                                                                >  SRR13385772.448293/1‑301 (MQ=60)
                                           TTTGCAAAACAGAATGTTTCCATTTCTGAAGAAAATTAACGAAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGTCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATC                                                                                                                                                                                                                                >  SRR13385772.1230316/1‑300 (MQ=60)
                                                   ACAGAATGTTTCCATTTCTGAAGAAAATTAACGAAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTC                                                                                                                                                                                                                       <  SRR13385772.879486/301‑1 (MQ=60)
                                                     ATAATGTTTCCATTTCTGAAGAAAATTAACGAAGAATCCAAAACTGTAATGTTGCCTATTATCACAGACATGACAACTTGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTA                                                                                                                                                                                                                     <  SRR13385772.535023/301‑1 (MQ=60)
                                                                      GAAGAAAATTAACGAAGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCT                                                                                                                                                                                                       <  SRR13385772.34315/298‑1 (MQ=60)
                                                                                         TCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGACACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTACAATTTCTGAGACCGCTAAAGAAACGGAA                                                                                                                                                                                  >  SRR13385772.40943/1‑300 (MQ=60)
                                                                                                     ATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACT                                                                                                                                                                     <  SRR13385772.942343/301‑1 (MQ=60)
                                                                                                     ATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGAAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACT                                                                                                                                                                     <  SRR13385772.1203095/301‑1 (MQ=60)
                                                                                                         GGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACG                                                                                                                                                                                                                                              <  SRR13385772.730/224‑1 (MQ=60)
                                                                                                          GCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGT                                                                                                                                                                 >  SRR13385772.272168/1‑300 (MQ=60)
                                                                                                                   CACAGACATGACAACTGGAGAGGCAGTGCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCG                                                                                                                                                       <  SRR13385772.650678/301‑1 (MQ=60)
                                                                                                                         CATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAACGAAACGGAACAAAGGGTCTACTTATTAGACTGCTCGACAGTG                                                                                                                                                 >  SRR13385772.146189/1‑301 (MQ=60)
                                                                                                                                       GGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTT                                                                                                                                   <  SRR13385772.635902/301‑1 (MQ=60)
                                                                                                                                        GGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACTGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTT                                                                                                                                  <  SRR13385772.204273/301‑1 (MQ=60)
                                                                                                                                           AGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCT                                                                                                                               <  SRR13385772.199358/301‑1 (MQ=60)
                                                                                                                                                   CACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATA                                                                                                                       <  SRR13385772.1077447/301‑1 (MQ=60)
                                                                                                                                                       CGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATT                                                                                                                   <  SRR13385772.66594/301‑1 (MQ=60)
                                                                                                                                                                   GGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGTAAGAGGGTTAGCAAAGGAATAGGTTTTGTTGTAACGATTGCTGAAAATGATGTTCCTTTATTGTTGAAACAGTTGAAAGTGATGGAAGCTTCAAAAAACGAAGTACCATTCCAAATAGTAGCCACGGGAAATGAACTATCATCAGAGTCTGTTGCTAAAATGTCTGAGACCGCTAAATAAACTGAACAAAGTGTCTACTTAGTAGACTGCGCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAG                                                                                                       <  SRR13385772.1252312/301‑1 (MQ=60)
                                                                                                                                                                             AACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTATCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGTAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGG                                                                                             >  SRR13385772.550831/1‑301 (MQ=60)
                                                                                                                                                                                          ACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTCTTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAACGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTCATTTTGCTAATACATCCATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTT                                                                                >  SRR13385772.43110/1‑301 (MQ=60)
                                                                                                                                                                                                    CAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAA                                                                                                 <  SRR13385772.879276/274‑1 (MQ=60)
                                                                                                                                                                                                         GGAAGAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAG                                                                                                                                                                                                                         <  SRR13385772.1087498/149‑1 (MQ=60)
                                                                                                                                                                                                           AATAGGTTGAGCGAAGGAAGAGGTTTTGTTTTAACTATTGCTTAAAAGGATGTTCCTTTATTTGTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATCCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAAT                                                               <  SRR13385772.150084/301‑1 (MQ=60)
                                                                                                                                                                                                                                 GTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAACTGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGT                                         >  SRR13385772.1014790/1‑301 (MQ=60)
                                                                                                                                                                                                                                                 TGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGG                         >  SRR13385772.98711/1‑301 (MQ=60)
                                                                                                                                                                                                                                                           GATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACT               <  SRR13385772.534007/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                        TTTTGAAACAGTTGAAAGTGATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAACTGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCC  >  SRR13385772.592860/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                 
ATCCTACTGCAATATTTGCAAATTCAACCGTAAATCCTCATGATTTGCAAAACAGAATGTTTCCATTTCTGAAGAAAATTAACGAGGAATCCAAAACTGTAATGTGGCCTATTATCACAGACATGACAACTGGAGAGGCAGTTCCGGCACCCGAGGTTGATATGGAATCATCAAACTTTAATGGTAACTTTTGGTCCAACTGGAATAGGTTGAGCAAAGGAAGAGGTTTTGTTTTAACTATTGCTGAAAAGGATGTTCCTTTATTTTTGAAACAGTTGAAAGTGATGGAATTTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCC  >  BK006942/326584‑327148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑