Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GATGGAATTTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGCGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATTACCGTTTTCTTCCGAAACCTCAGAAGAAGCATCTGTGTATTACAATTTTTTCAAAAAATTACGACTCCATCATGTTGATAGTGGTTTGGTTGTAGTCAATAAACTTGAGAAATTAAATGGATTGTTGATGTCTTTTATGTTAAATTTGGATGGAAAATTG  >  BK006942/326867‑327461
                                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                                         
GATGGAATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGG                                                                                                                                                                                                                                                                                                        >  SRR13385771.1100820/1‑301 (MQ=60)
     AATCTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACT                                                                                                                                                                                                                                                                                                   >  SRR13385771.125487/1‑301 (MQ=60)
                AACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGTTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCA                                                                                                                                                                                                                                                                                           >  SRR13385771.605839/1‑298 (MQ=60)
                    AATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAG                                                                                                                                                                                                                                                                                    <  SRR13385771.467869/301‑1 (MQ=60)
                             TCCAAATAGTATCCACGGGAAATGAACTATCAGCAGCGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACCCATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGG                                                                                                                                                                                                                                                                            >  SRR13385771.1481280/1‑300 (MQ=60)
                                 AATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAAC                                                                                                                                                                                                                                                                       <  SRR13385771.1859670/301‑1 (MQ=60)
                                    AGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTGGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGTGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAG                                                                                                                                                                                                                                                                    <  SRR13385771.509676/301‑1 (MQ=60)
                                                AAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGTGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAA                                                                                                                                                                                                                                                        <  SRR13385771.1819937/301‑1 (MQ=60)
                                                 AATGAACAATCGGCAGAGTCTATTGCTAATGTTTCTGAGACCACTAAAGAAACGGAACAAAGGGACTACATAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTGATACATACATTTCTTTTTTTAAGAATAAATGGGTAGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAAT                                                                                                                                                                                                                                                       <  SRR13385771.1205505/301‑1 (MQ=60)
                                                                   TCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATCGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTA                                                                                                                                                                                                                                      >  SRR13385771.181347/1‑300 (MQ=60)
                                                                   TCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTA                                                                                                                                                                                                                                      >  SRR13385771.1749100/1‑300 (MQ=60)
                                                                       TTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTGTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACAGTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACGCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTA                                                                                                                                                                                                                                      <  SRR13385771.1456791/296‑1 (MQ=60)
                                                                                                 GAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGAAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATCGGGTTATGGAAAACGAGCAACCTTTCCAATACTGCATCGAAATGTTACATGAAGTGGAACCCTCTGCACAAGAAggcg                                                                                                                                                                                                       >  SRR13385771.1159799/1‑297 (MQ=60)
                                                                                                        AACAAAGTGGCTACTTAGTAGACTGCTCGACAGTTCTTGACACTAATTTTTCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTGTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCGTCTTACAGGGAGATAGGGATACTTTTTTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTAT                                                                                                                                                                                                <  SRR13385771.1628876/301‑1 (MQ=60)
                                                                                                                  CTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGG                                                                                                                                                                                      >  SRR13385771.1343237/1‑301 (MQ=60)
                                                                                                                         GTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCAACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTT                                                                                                                                                                               >  SRR13385771.387322/1‑301 (MQ=60)
                                                                                                                                 CTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTACGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTAATGGAAGTAGGTTAGTTTTTGATTCC                                                                                                                                                                       >  SRR13385771.799002/1‑301 (MQ=60)
                                                                                                                                       AGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATT                                                                                                                                                                  >  SRR13385771.1729940/1‑300 (MQ=60)
                                                                                                                                       AGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATT                                                                                                                                                                  >  SRR13385771.626126/1‑300 (MQ=60)
                                                                                                                                              GACACTAATTTTGCTAATACATACATTTCTTTGTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATTACCGTTTT                                                                                                                                                          <  SRR13385771.1313826/301‑1 (MQ=60)
                                                                                                                                                CACTAATTTTGCTAATACATACATTTCTTTGTTTCAGAATAGATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTGTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACGTTTTCGACGCGCCTTCTTACAGGGAGAGAGGGAGACTGTTGTTCAAGGATAGGGTTATGGAAAACGATCAAACTTTCCAATACTGCATCGAAATGTTAAAGGAAGTGTAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATTACCGTTTTCT                                                                                                                                                        <  SRR13385771.1348247/301‑1 (MQ=60)
                                                                                                                                                AACTAATTTTGCTAATACATACATTTCTTTTTTTCAGGATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATTACCGTTTTCT                                                                                                                                                        <  SRR13385771.1391502/301‑1 (MQ=60)
                                                                                                                                                                         TCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATTACCGTTTTCTTCCGAAACTTCAGAAGAAGCATCTG                                                                                                                               >  SRR13385771.953050/1‑301 (MQ=60)
                                                                                                                                                                               TTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTC                                                                                                                                                                     <  SRR13385771.1157827/257‑1 (MQ=60)
                                                                                                                                                                                   AGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATTACCGTTTTCTTCCGAAACTTCAGAAGAAGCATCTGTGTATTACA                                                                                                                      >  SRR13385771.1063813/1‑300 (MQ=60)
                                                                                                                                                                                                  CCACTTTGTTAAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTCCAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGACAACGAGCCAACTTTCCAATACTGCCTCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGACCGCAGATTTCTTGGAAGCAGGTTAGTTTTTGATTCGTCATTAACGTTTTCTTCCGAAACTTCCGAAGAAGCATCTGTGTATTCCAATTTTTTCAAAAAATT                                                                                                      >  SRR13385771.973657/1‑301 (MQ=60)
                                                                                                                                                                                                     CTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATTACCGTTTTCTTCCGAAACTTCAGAAGAAGCATCTGTGTATTACAATTTTTTCAAAAAATTACG                                                                                                   >  SRR13385771.1049777/1‑301 (MQ=60)
                                                                                                                                                                                                        TGTTCAACACATTTGAAGAATACATTGTGTTGGATGCAGACTTAGTACCGGTTGGAGTGTCTGATTTCTTTTTCGACTCTCCTTCTGACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCATATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATTACCTTTTTCTTCCGAAACTTCAGAAGAAGCATCTGTGTATTACAATTTTTTCAAAAAATTACGAC                                                                                                 <  SRR13385771.1254230/300‑1 (MQ=60)
                                                                                                                                                                                                             AACACATTTGAAGAATACATTTTGTTGGATGAAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATTACCGTTTTCTTCCGAAACTTCAGAAGAAGCATCTGTGTATTACAATTTTTTCAAAAAATTACGACTCCATC                                                                                           >  SRR13385771.70536/1‑301 (MQ=60)
                                                                                                                                                                                                                  ATTTGAAGTATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTGTTCGACGCTCCTTCTTACAGGGAGAGAGTGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATTACCGTTTTCTTCCGAAACTTCAGAAGAAGCATCTGTGTATTACAATTTTTTCAAAAAATTACGACTCCATCATGTT                                                                                      <  SRR13385771.443254/301‑1 (MQ=60)
                                                                                                                                                                                                                                TTTTGTTGGATGCAGACGTAGTACCGTTTGTCGGGTCTGATTACTTTTTCGACTCTCCTTATTACAGGGAGAGCGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAAAGTTAAATGAAGTGGAACCATCTGCACAAGAACGCAGATTTACAGGAAGTAGGTTAGCTTTTGATTCGTCATTACCGTTTTCTTCCGAAACTTCAGAAGAAGCATCTGTGTATTCCAATTTTTTCAAAAAATAACGACTCCAACATGCTGATAGAGGTTTGAT                                                                        >  SRR13385771.596507/1‑301 (MQ=60)
                                                                                                                                                                                                                                             AGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAA                                                                                                                                                                                                                          <  SRR13385771.185082/142‑1 (MQ=60)
                                                                                                                                                                                                                                                            TGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATTACCGTTTTCTTCCGAAACTTCAGAAGAAGCATCTGTGTATTACAATTTTTTCAAAAAATTACGACTCCATCATGTTGATAGTGGTTTGGTTGTAGTCAATAAACTTGAGAAATTAAA                                             <  SRR13385771.356461/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                    CTCTCCTTCTTACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCTATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATTACCGTTTTCTTCCGAAACTTCAGAAGAAGCATCTGTGTATTACAATTTTTTCAAAAAATTACGACTCCATCATGTTGATAGTGGTTTGGTTGTAGTCAATAAACTTGAGAAATTAAATGGATTGTTGATGTCTTTTATGTT                     >  SRR13385771.782518/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                                              TACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGATCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGTAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATGCGTCATGACCGTTTTCTTCCGAAACTTCAGAAGAAGCATCTGTGTATTACAATTTTTTCAAAAAATTACGACTCCATCATGTTGATAGTGGTTTGGTTGTAGTCAATAAACTTGAGAAATTAAATGGATTGTTGATGTCTTTTATGTTAAATGTGGAT           <  SRR13385771.590497/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                              TACAGGGAGAGAGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATTACCGTTTTCTTCCGAAACTTCAGAAGAAGCATCTGTGTATTACAATTTTTTCAAAAAATTACGACTCCATCATGTTGATAGTGGTTTGGTTGTAGTCAATAAACTTGAGAAATTAAATGGATTGTTGATGTCTTTTATGTTAAATTTGGAT           <  SRR13385771.253559/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                      GAGAGGGATACTTTTGGTCAAGGATAGTGTGATGGAAAACTAGCAAACTTTCCAATACTGCATCGAAATGTTAAAGGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATTACCGTTTTCTTCCGAAACTTCAGAAGAAGCATCTGTGTATTACAATTTTTTCAAAAAATTACGACTCCATCATGTTGATAGTGGTTTGGTTGTAGTCAATAAACTTGAGAAATTAAATGGATTGTTGATGTCTTTTATGTTAAATTTGGATGGAAAATTG  <  SRR13385771.229567/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                                         
GATGGAATTTTCAAAAAACGAATTACCATTCCAAATAGTATCCACGGGAAATGAACTATCAGCAGAGTCTATTGCTAAAATTTCTGAGACCGCTAAAGAAACGGAACAAAGGGTCTACTTAGTAGACTGCTCGACAGTGCTTGACACTAATTTTGCTAATACATACATTTCTTTTTTTCAGAATAAATGGGTCGCCACTTTGTTCAACACATTTGAAGAATACATTTTGTTGGATGCAGACGTAGTACCGTTTGTAGGGTCTGATTACTTTTTCGACTCTCCTTCTTACAGGGAGAGCGGGATACTTTTGTTCAAGGATAGGGTTATGGAAAACGAGCAAACTTTCCAATACTGCATCGAAATGTTAAATGAAGTGGAACCCTCTGCACAAGAACGCAGATTTATTGGAAGTAGGTTAGTTTTTGATTCGTCATTACCGTTTTCTTCCGAAACCTCAGAAGAAGCATCTGTGTATTACAATTTTTTCAAAAAATTACGACTCCATCATGTTGATAGTGGTTTGGTTGTAGTCAATAAACTTGAGAAATTAAATGGATTGTTGATGTCTTTTATGTTAAATTTGGATGGAAAATTG  >  BK006942/326867‑327461

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: