Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 6054 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCGATTACTTTAGCTAATTCCGTCGTTTCTTCCACTACTGAAAAGATAACAGAGGTTTCAACGGTGTCAGCTTCAGAACAAGTTAGTGCTACTCAAACAAACTCATTGGTTTCTACTTCTACTGTTTCCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTACTGCACCTTTCTCTTCCCAACTTTCTTCATCTTCATCTTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCAACATCATCATCATCTGCCCCTCTTTCCTTAACTTCTTCTTCTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGCACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCCGCAGTTGAGTCATCCCAAACAGGGTCCACTATAGCAAGAACTACCTCTACACTGGTACCCTCTTCTAGCGTAGATACAACG  >  BK006934/385705‑386286
                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                                                                                                                  
gtgctctccgatcCTAATTCCGTCGTTTCTTCCACTACTGAAAAGATAACAGAGGTTTCAACGGTGTCAGCTTCAGAACATGTTAGTGCTACTCAAACAAACTCATTGGTTTCTACTTCTACTGTTTCCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCAC                                                                                                                                                                                                                                                                                                                                                                               <  SRR13385772.976155/288‑1 (MQ=60)
                    CGTCGTTTCTTCCACTACTGAAAAGATAACAGAGGTTTCAACGGTGTCAGCTTCAGAACATGTTAGTGCTACTCAAACAAACTCATTGGTTTCTACTTCTACTGTTTCCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCT                                                                                                                                                                                                                                                                                                                                                           <  SRR13385772.128728/301‑1 (MQ=60)
                             TTCCACTACTGAAAAGATAACAGAGGTTTCAACGGTGTCAGCTTCAGAACATGTTAGTGCTACTCAAACAAACTCATTGGTTTCTACTTCTACTGTTTCCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTC                                                                                                                                                                                                                                                                                                                                                   <  SRR13385772.721867/300‑1 (MQ=60)
                                             ATAACAGAGGTTTCAACGGTGTCAGCTTCAGAACATGTTAGTGCTACTCAAACAAACTCATTGGTTTCTACTTCTACTGTTTCCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTCCGTCTTCAGCTTTTCGTTTTACTTCTAGTTCTCCTTTTGTTTCATCCATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAC                                                                                                                                                                                                                                                                   >  SRR13385772.1045164/1‑301 (MQ=60)
                                                                                                               TCTACTTCTACTGTTTCCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCCTCATCattctcaacatcatcatcatctgcccctctttcctta                                                                                                                                                                             <  SRR13385772.1262626/300‑38 (MQ=60)
                                                                                                                 TACTTCTACTGTTTCCACTATAAGTCAAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTAAAAGTATCGAATCGTCAGGTACATATTCAGCTACAGACGAACCATATGCATCTTACGATTTTAGTTTGACTTCTAGTTCTGCTTTTAATTCCACTATTGCACCTTTCTATTCTCAAATACCTTCATCTTCATCTTATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCATAATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCACCATCATCCTCATCattatcaacatcatcataatctgcaaatctttaattaact                                                                                                                                                                          >  SRR13385772.1151186/1‑261 (MQ=60)
                                                                                                                           GTTTCCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCCGGTACATCTTCCGCTAAAGCCGCACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCCTCTTCATCTTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATacttctacacttcctcctcatcattctaaccatcataatcatctgccactctttccttaaatctttattctt                                                                                                                                                                                     >  SRR13385772.334628/1‑229 (MQ=60)
                                                                                                                               CCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCCGGTTTTCCTTTGACCCCTCGCTCTGCTTTTGTTTCACCTATTGCACATTTCTCTACTCAACTCTCTTCATCTTCTTCTTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCACCCTCATCATCCTAAACCTCATCCTCATCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCCACATCATCATCACCTGCCACTCTTTCCTAAACTTCTTCTTCTTCTTC                                                                                                                                                                                 >  SRR13385772.722153/1‑301 (MQ=60)
                                                                                                                                      CAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGATTTCGTTTGACTTCTAGTTCTGCTTTTGTATCATATATTGCAACTTTCTCTTCTCAACTTTCTTCATCTTCATCTTATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCAACATCATCATCATCattctcaacatcatcatcatctgcccctctagataggaagagcacacgactgaactccaa                                                                                                                                                      >  SRR13385772.217958/1‑240 (MQ=60)
                                                                                                                                                ATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCATCATCTGCCCCTCTTTCCTTAACTTCTTCTTCTTCTTCTTtcg                                                                                                                                                                            <  SRR13385772.476034/289‑4 (MQ=60)
                                                                                                                                                       CTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTT                                                                                                                                                                                                                                                                                                                                                             <  SRR13385772.656808/168‑1 (MQ=60)
                                                                                                                                                                             CTCTGCATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGG                                                                                                                           >  SRR13385772.347633/1‑300 (MQ=60)
                                                                                                                                                                                  CATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCCTCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCCTCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTCTTATTACCTTGGAACCATCGAGCTCAAAAAGCGGACACTC                                                                                                                     >  SRR13385772.52820/1‑301 (MQ=60)
                                                                                                                                                                                                   TCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCACAAAGCGGAAACTCTCAACTAACTTTGGCGC                                                                                                    >  SRR13385772.82652/1‑301 (MQ=60)
                                                                                                                                                                                                      CAAAGTATCGAATCGTCAGGTACATCTTACGCTACAGCCGAACCGTCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCAACTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGT                                                                                                    <  SRR13385772.114297/298‑1 (MQ=60)
                                                                                                                                                                                                              CGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTC                                                                                          <  SRR13385772.607673/300‑1 (MQ=60)
                                                                                                                                                                                                                    GTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCC                                                                                   >  SRR13385772.723821/1‑301 (MQ=60)
                                                                                                                                                                                                                                 TCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCCGCAGTTGAGTCA                                                                       <  SRR13385772.1099799/300‑1 (MQ=60)
                                                                                                                                                                                                                                    GCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCCGCAGTTGCGTCATCCC                                                                   >  SRR13385772.462272/1‑301 (MQ=60)
                                                                                                                                                                                                                                        CAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCCTCATCattctcaacatc                                                                                                                                                                                                      <  SRR13385772.133099/154‑13 (MQ=60)
                                                                                                                                                                                                                                                                      GTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCGTCTGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAGCCTCATCATTCTCAACATCAGCCTCATCATGCTCAACATCATCATCATCTGCCCCTCTTTCCGTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCGTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCCGCAGTTGAGTCATCCCAAACAGGGTCCACTATAGCAAGAACTACCTCTAC                                 <  SRR13385772.718288/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                TAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCCGCAGTTGAGTCATCCCAAACAGGGTCCACTATAGCAAGAACTACATCTACACTGGTACCC                       >  SRR13385772.893274/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                  GTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCGTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACGATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTGTGGCGTCATCGTCTTCCACTTCCGCAGTTGAGTCATCCCAAACAGGGTCCACTATAGCAAGAACTACCTCTACACTGGTACCCTC                     <  SRR13385772.1300731/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                        CTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTGTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCGCTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCCGCAGTTGAGTCA                                                                       <  SRR13385772.565776/245‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                 CATCGATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCATCATCTGCCCCTCTTTCCTT‑‑‑‑‑‑‑‑‑TACGTCTTCTTCTTCTTCGTTCGCCACTATGATTACCTTGGGACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCTTCTTCCACTTCCGCAGTTGGGTCATCCCAAACAGGGTCCACTATAGCAAGAACTACCTCTACACTGGTACCCTCTTCTAGCGTAGATA       <  SRR13385772.1280921/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                      ATTGCACCTTTCTCTTCTCAGCTGTCTTCATCTTCATCTTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACATCATCCTCATCATTCTCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCATCATCTGCCCCTCTGGCCTGA‑‑‑‑‑‑‑‑‑GCTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCGTGGAACCATCGAGCTCAAAAAGCGGAAACTCGCGACTAACTTTGGCGTCATCGTCTTCGACGTCCGCAGTTGAGTCATCCCAAACAGGGTCCACTATAGCAAGAACTACCTCTACACTGGTACCCTCGTCTAGCGTAGATACAACG  <  SRR13385772.874362/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                                                                                                                                                  
CCGATTACTTTAGCTAATTCCGTCGTTTCTTCCACTACTGAAAAGATAACAGAGGTTTCAACGGTGTCAGCTTCAGAACAAGTTAGTGCTACTCAAACAAACTCATTGGTTTCTACTTCTACTGTTTCCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTACTGCACCTTTCTCTTCCCAACTTTCTTCATCTTCATCTTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCAACATCATCATCATCTGCCCCTCTTTCCTTAACTTCTTCTTCTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGCACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCCGCAGTTGAGTCATCCCAAACAGGGTCCACTATAGCAAGAACTACCTCTACACTGGTACCCTCTTCTAGCGTAGATACAACG  >  BK006934/385705‑386286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑