Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
1 1 1
2 1 1
3 1 1
4 1 1
5 1 1
6 1 1
8 1 1
9 1 1
10 1 1
9 9 9

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 9 10
Multiple Base Substitutions 0 0
Deletions 4 32
Insertions 2 18
Mobile Element Insertions 3 11
Amplifications 7 7
Gene Conversions 0 0
Inversions 0 0
Total 25 78

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F37 I1 R1 8 0 35.8 1306638 74.9% 978671 207.3
A2 F37 I1 R1 8 0 29.9 1123408 72.9% 818964 211.2
A3 F37 I1 R1 11 0 39.8 1417988 69.2% 981247 219.7
A4 F37 I1 R1 11 0 35.2 1178400 74.3% 875551 221.8
A5 F37 I1 R1 7 0 39.5 1323368 74.3% 983262 211.2
A6 F37 I1 R1 8 0 50.0 1716154 75.1% 1288831 207.1
A8 F37 I1 R1 9 0 31.8 1149162 75.1% 863020 208.1
A9 F37 I1 R1 7 0 25.7 923070 88.2% 814147 161.0
A10 F37 I1 R1 9 0 21.3 793486 78.9% 626060 191.7

Mutation Needle Plot

Mutation Targets

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