Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 1 2
2 1 1
3 1 1
4 4 5

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 1138 1637
Multiple Base Substitutions 0 0
Deletions 294 421
Insertions 104 128
Mobile Element Insertions 1 5
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 1537 2191

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 87 0 31.3 1776092 98.2% 1744122 80.6
A1 F1 I1 R1 690 0 31.8 1836723 97.1% 1783458 80.6
A1 F1 I2 R1 730 0 35.1 2107516 91.4% 1926269 80.6
A2 F1 I1 R1 182 0 31.9 1789978 98.5% 1763128 80.6
A3 F1 I1 R1 502 0 34.8 1912488 98.2% 1878063 80.6

Mutation Needle Plot

Mutation Targets

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