Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 1 2
2 1 2
3 1 2
4 1 2
1234 1 1
6 6 10

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 90 178
Multiple Base Substitutions 1 10
Deletions 14 74
Insertions 19 87
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 124 349

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 29 0 281.6 8141248 99.5% 8100541 150.0
A1 F58 I0 R1 130 0 67.4 3305110 95.6% 3159685 127.6
A1 F58 I6 R1 38 0 75.3 2996106 95.4% 2858285 127.9
A2 F60 I0 R2 127 0 52.4 2510580 95.3% 2392582 126.8
A2 F60 I10 R2 41 0 82.7 3234824 95.2% 3079552 125.9
A3 F57 I0 R3 101 0 37.7 1797694 94.5% 1698820 126.4
A3 F57 I12 R3 43 0 91.7 3258946 95.6% 3115552 126.5
A4 F59 I0 R4 146 0 70.0 3415284 95.5% 3261596 127.1
A4 F59 I7 R4 38 0 73.0 3328070 85.3% 2838843 124.1
A1234 F57 I0 R1 67 0 347.2 11707512 99.6% 11660681 150.0

Mutation Needle Plot

Mutation Targets

Entries to show