Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 4 6
2 3 4
3 4 6
4 12 17

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 63 70
Multiple Base Substitutions 0 0
Deletions 4 4
Insertions 1 1
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 68 75

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I0 R1 190 0 91.0 3214010 98.0% 3149729 134.5
A1 F25 I1 R1 1 0 123.7 4347430 98.6% 4286565 134.6
A1 F34 I1 R1 2 0 88.5 3516540 86.1% 3027740 136.2
A1 F65 I0 R1 557 0 37.6 1414902 96.1% 1359720 135.9
A1 F65 I1 R1 1 0 106.0 3615000 99.1% 3582465 137.9
A1 F70 I0 R1 295 0 33.8 1336382 93.6% 1250853 134.8
A1 F70 I1 R1 1 0 80.2 2792580 98.9% 2761861 135.2
A2 F23 I1 R1 1 0 122.1 4272244 98.7% 4216704 135.0
A2 F36 I1 R1 3 0 32.4 2104674 97.7% 2056266 135.4
A2 F67 I0 R1 187 0 69.8 2568064 96.1% 2467909 135.8
A2 F67 I1 R1 3 0 107.5 3718796 99.0% 3681608 135.9
A3 F23 I1 R1 1 0 117.1 4107880 98.4% 4042153 135.1
A3 F33 I1 R1 1 0 26.8 1156120 96.5% 1115655 135.2
A3 F65 I0 R1 326 0 72.4 2703682 96.0% 2595534 135.7
A3 F65 I1 R1 0 0 107.6 3699490 99.0% 3662495 137.1
A3 F70 I0 R1 234 0 86.5 3345260 95.5% 3194723 135.1
A3 F70 I1 R1 1 0 85.6 3023928 98.4% 2975545 134.1

Mutation Needle Plot

Mutation Targets

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