Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 3 4
2 3 4
3 3 4
4 3 4
5 3 4
6 16 21

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 128 793
Multiple Base Substitutions 9 167
Deletions 21 93
Insertions 33 357
Mobile Element Insertions 0 0
Amplifications 21 22
Gene Conversions 0 0
Inversions 0 0
Total 212 1432

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 59 0 79.3 3391134 98.6% 3343658 146.3
A1 F14 I0 R1 248 0 61.6 2601574 98.7% 2567753 146.9
A1 F14 I1 R1 58 0 76.7 3323998 98.6% 3277462 146.9
A1 F29 I1 R1 57 0 65.8 2790598 98.6% 2751529 146.7
A1 F64 I1 R1 60 0 70.4 2989830 98.5% 2944982 146.7
A2 F13 I0 R1 203 0 85.6 3649704 98.8% 3605907 146.1
A2 F13 I1 R1 58 0 75.1 3211970 98.6% 3167002 146.1
A2 F24 I1 R1 60 0 68.7 2919236 98.6% 2878366 146.9
A2 F59 I1 R1 58 0 78.7 3339874 98.5% 3289775 147.1
A3 F14 I0 R1 206 0 76.7 3255580 98.8% 3216513 146.3
A3 F14 I1 R1 57 0 86.1 3667460 98.7% 3619783 146.2
A3 F24 I1 R1 58 0 74.9 3151412 98.7% 3110443 147.7
A3 F53 I1 R1 62 0 81.2 3465250 98.6% 3416736 145.3
A4 F13 I0 R1 140 0 52.5 2164708 98.8% 2138731 146.1
A4 F13 I1 R1 59 0 72.5 3655346 98.4% 3596860 137.9
A4 F25 I1 R1 60 0 73.8 3348830 98.7% 3305295 145.5
A4 F58 I1 R1 60 0 66.0 2910360 98.3% 2860883 145.7
A5 F13 I0 R1 213 0 60.4 2554362 98.6% 2518600 147.1
A5 F13 I1 R1 57 0 60.3 2567246 98.7% 2533871 146.1
A5 F25 I1 R1 61 0 74.4 3161000 98.6% 3116746 146.7
A5 F61 I1 R1 63 0 66.6 2847048 98.6% 2807189 146.5

Mutation Needle Plot

Mutation Targets

Entries to show