mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,520,009 | 0 | T | A | 28.6% | 59.1 / 11.7 | 28 | I77F (ATT→TTT) | ansP | L‑asparagine permease |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 279782 | 43 (1.390) | 4 (0.140) | 4/144 | 2.9 | 9.3% | coding (871/1968 nt) | yagF | xylonate dehydratase YagF |
| ? | NZ_CP009273 | = 279774 | 39 (1.400) | coding (863/1968 nt) | yagF | xylonate dehydratase YagF | |||||
| * | ? | NZ_CP009273 | = 4567814 | 30 (0.970) | 4 (0.130) | 4/154 | 3.0 | 10.8% | coding (1341/1380 nt) | mcrB | 5‑methylcytosine‑specific restriction endonuclease subunit McrB |
| ? | NZ_CP009273 | = 4567918 | 37 (1.240) | coding (1237/1380 nt) | mcrB | 5‑methylcytosine‑specific restriction endonuclease subunit McrB | |||||
| * | ? | NZ_CP009273 | = 2707188 | 25 (0.810) | 3 (0.110) | 3/138 | 3.2 | 8.9% | coding (934/1335 nt) | srmB | ATP‑dependent RNA helicase SrmB |
| ? | NZ_CP009273 | = 2707267 | 40 (1.490) | coding (1013/1335 nt) | srmB | ATP‑dependent RNA helicase SrmB | |||||