mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,101,675 | 0 | G | T | 60.0% | ‑0.7 / 10.8 | 10 | N156K (AAC→AAA) | yiiQ | YiiQ family protein |
| * | NZ_CP009273 | 4,594,161 | 0 | C | T | 55.0% | ‑3.3 / 16.3 | 20 | S62F (TCT→TTT) | bglJ | DNA‑binding transcriptional activator BglJ |
| * | NZ_CP009273 | 4,594,167 | 0 | C | T | 55.0% | ‑0.2 / 17.3 | 20 | S64F (TCT→TTT) | bglJ | DNA‑binding transcriptional activator BglJ |
| * | NZ_CP009273 | 3,215,417 | 0 | A | G | 54.5% | 5.2 / 12.0 | 11 | E198G (GAA→GGA) | ebgR | transcriptional regulator EbgR |
| * | NZ_CP009273 | 3,454,146 | 0 | T | C | 54.5% | 4.1 / 10.7 | 11 | F324S (TTC→TCC) | gspF | type II secretion system inner membrane protein GspF |
| * | NZ_CP009273 | 3,679,381 | 0 | A | C | 54.5% | 2.5 / 11.2 | 11 | G1051G (GGT→GGG) | bcsC | cellulose synthase complex outer membrane protein BcsC |
| * | NZ_CP009273 | 3,549,566 | 0 | T | C | 53.8% | 3.5 / 13.2 | 13 | S215G (AGT→GGT) | rtcA | RNA 3'‑terminal phosphate cyclase |