mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,744,897 | 0 | A | C | 61.5% | 0.6 / 11.2 | 13 | V111G (GTT→GGT) | yiaT | MipA/OmpV family protein |
| * | NZ_CP009273 | 3,734,269 | 0 | T | G | 59.1% | 8.2 / 21.0 | 22 | V402G (GTG→GGG) | avtA | valine‑‑pyruvate transaminase |
| * | NZ_CP009273 | 297,088 | 0 | A | C | 57.1% | 10.5 / 14.8 | 14 | L171V (TTG→GTG) | paoB | aldehyde oxidoreductase FAD‑binding subunit PaoB |
| * | NZ_CP009273 | 2,141,226 | 0 | G | T | 55.6% | 5.7 / 12.9 | 9 | L24F (TTG→TTT) | yegD | molecular chaperone |
| * | NZ_CP009273 | 2,141,241 | 0 | C | A | 55.6% | 3.0 / 10.6 | 9 | N29K (AAC→AAA) | yegD | molecular chaperone |
| * | NZ_CP009273 | 4,091,464 | 0 | C | A | 55.6% | 4.2 / 12.0 | 9 | intergenic (+106/‑154) | sodA/kdgT | superoxide dismutase [Mn]/2‑keto‑3‑deoxygluconate transporter |
| * | NZ_CP009273 | 3,170,890 | 0 | A | C | 54.5% | 4.2 / 11.5 | 11 | V127G (GTG→GGG) | nudF | ADP‑ribose diphosphatase |
| * | NZ_CP009273 | 3,977,447 | 0 | A | T | 54.5% | 7.4 / 13.7 | 11 | Y377F (TAT→TTT) | aslB | anaerobic sulfatase maturase |
| * | NZ_CP009273 | 3,713,220 | 0 | A | C | 52.4% | 25.2 / 27.0 | 21 | intergenic (+92/‑189) | yiaG/cspA | HTH‑type transcriptional regulator/RNA chaperone/antiterminator CspA |