breseq  version 0.35.4  revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal new junction evidence (lowest skew 10 of 13 shown)
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4596915 =107 (1.180)4 (0.050) 4/248 NT 3.8% coding (926/1023 nt) lgoD L‑galactonate oxidoreductase; L‑gulonate oxidoreductase
?NC_000913 4596978 = 103 (1.190)coding (989/1023 nt) lgoD L‑galactonate oxidoreductase; L‑gulonate oxidoreductase
* ? NC_000913 = 4459872104 (1.140)5 (0.060) 5/242 NT 4.8% intergenic (+17/+28) cybC/nrdG pseudogene, truncated cytochrome b562; cytochrome b(562)/anaerobic ribonucleotide reductase activating protein
?NC_000913 = 4459886 103 (1.220)intergenic (+31/+14) cybC/nrdG pseudogene, truncated cytochrome b562; cytochrome b(562)/anaerobic ribonucleotide reductase activating protein
* ? NC_000913 = 428706997 (1.070)4 (0.050) 4/252 NT 3.9% coding (303/1959 nt) acs acetyl‑CoA synthetase
?NC_000913 = 4287100 104 (1.180)coding (272/1959 nt) acs acetyl‑CoA synthetase
* ? NC_000913 4285055 =77 (0.850)3 (0.030) 3/256 NT 3.7% coding (159/315 nt) yjcH DUF485 family inner membrane protein
?NC_000913 4285077 = 79 (0.880)coding (137/315 nt) yjcH DUF485 family inner membrane protein
* ? NC_000913 3334936 =137 (1.510)4 (0.050) 4/250 NT 2.9% coding (28/279 nt) sfsB malPQ operon transcriptional activator
?NC_000913 3334956 = 133 (1.520)coding (48/279 nt) sfsB malPQ operon transcriptional activator
* ? NC_000913 = 3083839112 (1.230)4 (0.050) 4/242 NT 3.4% intergenic (‑42/+96) speB/speA agmatinase/biosynthetic arginine decarboxylase, PLP‑binding
?NC_000913 = 3083858 120 (1.420)intergenic (‑61/+77) speB/speA agmatinase/biosynthetic arginine decarboxylase, PLP‑binding
* ? NC_000913 = 264548462 (0.680)3 (0.030) 3/252 NT 4.5% coding (1842/2313 nt) pbpC penicillin‑insensitive murein repair transglycosylase; inactive transpeptidase domain protein
?NC_000913 = 2645503 68 (0.770)coding (1823/2313 nt) pbpC penicillin‑insensitive murein repair transglycosylase; inactive transpeptidase domain protein
* ? NC_000913 = 257406373 (0.800)3 (0.030) 3/258 NT 3.8% coding (243/804 nt) eutT cobalamin adenosyltransferase involved in ethanolamine utilization
?NC_000913 = 2574080 80 (0.890)coding (226/804 nt) eutT cobalamin adenosyltransferase involved in ethanolamine utilization
* ? NC_000913 2325633 =85 (0.930)3 (0.040) 3/244 NT 3.6% coding (878/1323 nt) atoE short chain fatty acid transporter
?NC_000913 2325660 = 83 (0.970)coding (905/1323 nt) atoE short chain fatty acid transporter
* ? NC_000913 = 197806276 (0.840)3 (0.030) 3/260 NT 3.8% coding (136/351 nt) flhD flagellar class II regulon transcriptional activator, with FlhC
?NC_000913 = 2290113 NA (NA)noncoding (1/1195 nt) IS5 repeat region