mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 34 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4542682 = | 124 (1.700) | 4 (0.060) | 4/248 | NT | 3.3% | intergenic (+49/‑433) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | 4542996 = | 117 (1.720) | intergenic (+363/‑119) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| * | ? | NC_000913 | 4467063 = | 95 (1.300) | 4 (0.060) | 3/258 | NT | 4.1% | coding (184/948 nt) | treR | trehalose 6‑phosphate‑inducible trehalose regulon transcriptional repressor |
| ? | NC_000913 | 4467094 = | 95 (1.340) | coding (153/948 nt) | treR | trehalose 6‑phosphate‑inducible trehalose regulon transcriptional repressor | |||||
| * | ? | NC_000913 | 4277024 = | 86 (1.180) | 3 (0.040) | 3/260 | NT | 3.7% | coding (1554/1587 nt) | yjcC | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase |
| ? | NC_000913 | 4277056 = | 72 (1.010) | coding (1586/1587 nt) | yjcC | putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase | |||||
| * | ? | NC_000913 | 4165174 = | 103 (1.410) | 5 (0.070) | 4/258 | NT | 4.8% | coding (1536/1845 nt) | btuB | vitamin B12/cobalamin outer membrane transporter |
| ? | NC_000913 | 4165194 = | 100 (1.410) | coding (1556/1845 nt) | btuB | vitamin B12/cobalamin outer membrane transporter | |||||
| * | ? | NC_000913 | 4146335 = | 84 (1.150) | 3 (0.040) | 3/252 | NT | 3.6% | coding (78/879 nt) | pflC | putative [formate‑C‑acetyltransferase 2]‑activating enzyme; pyruvate formate‑lyase 1‑activating enzyme |
| ? | NC_000913 | 4146358 = | 83 (1.200) | coding (101/879 nt) | pflC | putative [formate‑C‑acetyltransferase 2]‑activating enzyme; pyruvate formate‑lyase 1‑activating enzyme | |||||
| * | ? | NC_000913 | = 4142567 | 105 (1.440) | 4 (0.060) | 4/252 | NT | 3.9% | coding (38/1080 nt) | frwC | putative enzyme IIC component of PTS |
| ? | NC_000913 | = 4142575 | 96 (1.390) | coding (46/1080 nt) | frwC | putative enzyme IIC component of PTS | |||||
| * | ? | NC_000913 | 4011354 = | 86 (1.180) | 3 (0.040) | 3/258 | NT | 3.3% | coding (279/900 nt) | yigM | putative inner membrane EamA‑like transporter |
| ? | NC_000913 | 4011404 = | 92 (1.300) | coding (329/900 nt) | yigM | putative inner membrane EamA‑like transporter | |||||
| * | ? | NC_000913 | = 3927413 | 101 (1.380) | 3 (0.040) | 3/256 | NT | 2.9% | coding (259/993 nt) | asnA | asparagine synthetase A |
| ? | NC_000913 | = 3927459 | 107 (1.520) | coding (305/993 nt) | asnA | asparagine synthetase A | |||||
| * | ? | NC_000913 | = 3880547 | 89 (1.220) | 3 (0.040) | 3/250 | NT | 3.3% | coding (675/1074 nt) | recF | gap repair protein |
| ? | NC_000913 | = 3880561 | 95 (1.380) | coding (661/1074 nt) | recF | gap repair protein | |||||
| * | ? | NC_000913 | 3853937 = | 158 (2.160) | 3 (0.040) | 3/260 | NT | 2.1% | coding (16/1185 nt) | emrD | multidrug efflux system protein |
| ? | NC_000913 | 3853960 = | 132 (1.850) | coding (39/1185 nt) | emrD | multidrug efflux system protein | |||||