mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4542690 | 297 (3.520) | 6 (0.080) | 6/232 | NT | 2.2% | intergenic (+57/‑425) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) |
| ? | NC_000913 | = 4542986 | 246 (3.140) | intergenic (+353/‑129) | fimE/fimA | tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin) | |||||
| * | ? | NC_000913 | = 2952518 | 65 (0.770) | 4 (0.050) | 3/236 | NT | 6.2% | coding (3486/3543 nt) | recB | exonuclease V (RecBCD complex), beta subunit |
| ? | NC_000913 | = 2952527 | 60 (0.750) | coding (3477/3543 nt) | recB | exonuclease V (RecBCD complex), beta subunit | |||||
| * | ? | NC_000913 | = 1567465 | 106 (1.260) | 3 (0.040) | 3/222 | NT | 3.0% | intergenic (‑325/+39) | dosC/yddW | diguanylate cyclase, cold‑ and stationary phase‑induced oxygen‑dependent biofilm regulator/liprotein, glycosyl hydrolase homolog |
| ? | NC_000913 | = 1567472 | 103 (1.370) | intergenic (‑332/+32) | dosC/yddW | diguanylate cyclase, cold‑ and stationary phase‑induced oxygen‑dependent biofilm regulator/liprotein, glycosyl hydrolase homolog | |||||
| * | ? | NC_000913 | = 656509 | 249 (2.950) | 4 (0.050) | 4/242 | NT | 1.6% | intergenic (‑541/‑48) | dcuC/pagP | anaerobic C4‑dicarboxylate transport/phospholipid:lipid A palmitoyltransferase |
| ? | NC_000913 | = 656512 | 242 (2.960) | intergenic (‑544/‑45) | dcuC/pagP | anaerobic C4‑dicarboxylate transport/phospholipid:lipid A palmitoyltransferase | |||||
| * | ? | NC_000913 | 493387 = | 72 (0.850) | 3 (0.040) | 3/238 | NT | 4.3% | coding (1296/1932 nt) | dnaX | DNA polymerase III/DNA elongation factor III, tau and gamma subunits |
| ? | NC_000913 | 493417 = | 64 (0.800) | coding (1326/1932 nt) | dnaX | DNA polymerase III/DNA elongation factor III, tau and gamma subunits | |||||
| * | ? | NC_000913 | 446233 = | 73 (0.870) | 3 (0.040) | 3/236 | NT | 3.9% | coding (434/1365 nt) | yajR | putative transporter |
| ? | NC_000913 | 446267 = | 77 (0.970) | coding (400/1365 nt) | yajR | putative transporter | |||||