| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | AY305378 | 84,810 | ISAE1 (+) +8 bp | [hoxW] | [hoxW] | |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AY305378 | 84810 = | 0 (0.000) | 29 (1.200) | 27/204 | 0.1 | 100% | coding (496/498 nt) | hoxW | [NiFe] hydrogenase (HoxH‑specific) C‑terminal protease |
| ? | AY305378 | = 94337 | NA (NA) | noncoding (1313/1313 nt) | ISAE1 | repeat region | |||||
| * | ? | AY305378 | = 84817 | 0 (0.000) | 28 (1.170) | 20/202 | 0.2 | 100% | intergenic (+5/‑18) | hoxW/hoxI | [NiFe] hydrogenase (HoxH‑specific) C‑terminal protease/HoxI |
| ? | AY305378 | 93025 = | NA (NA) | noncoding (1/1313 nt) | ISAE1 | repeat region | |||||
GTGTTCGGCAAGAATGGCAGCGCCATCCCGGCCGATATACTCGCCCAAAGGCGCCTCGTAGATCATCGTTGCGATCCTGTCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AY305378/84933‑84810‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAGCAACAAGAGCGATGCATAGCAAACTGTTTGAAGCAGCCCTTGGCATAAGCGATCCGTGGTTCGTC < AY305378/94337‑94221 GTGTTCGGCAAGAATGGCAGCGCCATCCCGGCCGATATACTCGCCCAAAGGCGCCTCGTAGATCATCGTTGCGATCCTGTCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTT > 1:388403/1‑133 CGGCAAGAATGGCAGCGCCATCCCGGCCGATATACTCGCCCAAAGGCGCCTCGTAGATCATCGTTGCGATCCTGTCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATT < 1:1025899/133‑1 GCAAGAATGGCAGCGCCATCCCGGCCGATATACTCGCCCAAAGGCGCCTCGTAGATCATCGTTGCGATCCTGTCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTC > 2:685247/1‑133 GCAAGAATGGCAGCGCCATCCCGGCCGATATACTCGCCCAAAGGCGCCTCGTAGATCATCGTTGCGATCCTGTCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTC > 1:258227/1‑133 CGGCCGATATACTCGCCCAAAGGCGCCTCGTAGATCATCGTTGCGATCCTGTCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGG < 1:685247/134‑1 ATATACTCGCCCAAAGGCGCCTCGTAGATCATCGTTGCGATCCTGTCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAG > 2:130313/1‑134 CCAAAGGCGCCTCGTAGATCATCGTTGCGATCCTGTCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAGCA < 2:388403/134‑1 AAGGCGCCTCGTAGATCATCGTTGCGATCCTGTCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAGCAACA < 1:831863/134‑1 AAGGCGCCTCGTAGATCATCGTTGCGATCCTGTCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAGCAAC > 1:660299/1‑133 GTAGATCATCGTTGCGATCCTGTCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAGCAACAAGAGCGATG < 1:130313/133‑1 TGCGATCCTGTCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAGCAACAAG > 1:374904/1‑114 TGCGATCCTGTCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAGCAACAAG < 2:374904/114‑1 GATCCTGTCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAGCAACAAGAGCGATGCATAGCAAACTGTTTG < 2:258227/134‑1 CTGTCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAGCAACAAGAGCGATGCATAGCAAACTGTTTGAAGC < 1:52927/134‑1 TCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAGCAACAAGAGCGATGCATAGCAAACTGTTTGAAGCAG < 2:660299/133‑1 TTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAA < 2:573396/90‑1 TTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAA > 1:573396/1‑90 TTTCATCGCGTTCTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAGCAACAAGAGCGATGCATAGCAAACTGTTTGAAGCAGCCCTTGGCATAAGC > 1:636352/1‑133 CTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAGCAACAAGAGCGATGCATAGCAAACTGTTTGAAGCA < 2:23638/106‑1 CTCCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTAAGGTAAAGAGCAACAAGAGCGATGCATAGCAAACTGTTTGAAGCA > 1:23638/1‑106 CCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAGCAACAAGAGCGATGCATAGCAAACTGTTT > 2:192916/1‑98 CCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAGCAACAAGAGCGATGCATAGCAAACTGTTT < 1:192916/98‑1 CCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTG > 2:139480/1‑38 CCTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTG < 1:139480/38‑1 CTTCTAACTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAGCAACAAGAGCGATGCATAGCAAACTGTTTGAAGCAGCCCTTGGCATAAGCGATCCGTGGTTCGTC < 1:1020269/133‑1 CTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAG < 2:743943/61‑1 CTGATTTCAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAG > 1:743943/1‑61 CAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGT < 1:876834/48‑1 CAGCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGT > 2:876834/1‑48 GTGTTCGGCAAGAATGGCAGCGCCATCCCGGCCGATATACTCGCCCAAAGGCGCCTCGTAGATCATCGTTGCGATCCTGTCGATTTCCTGCTCTTTCATCGCGTTCTCCTTCTAACTGATTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AY305378/84933‑84810‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCTCTTTTGAATTTCAAGTGGGTGGTATCGTGGCGGGTTTCAGGTAAAGAGCAACAAGAGCGATGCATAGCAAACTGTTTGAAGCAGCCCTTGGCATAAGCGATCCGTGGTTCGTC < AY305378/94337‑94221 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |