| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | AY305378 | 84,810 | ISAE1 (+) +8 bp | [hoxW] | [hoxW] | |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AY305378 | 84810 = | 0 (0.000) | 29 (1.200) | 27/204 | 0.1 | 100% | coding (496/498 nt) | hoxW | [NiFe] hydrogenase (HoxH‑specific) C‑terminal protease |
| ? | AY305378 | = 94337 | NA (NA) | noncoding (1313/1313 nt) | ISAE1 | repeat region | |||||
| * | ? | AY305378 | = 84817 | 0 (0.000) | 28 (1.170) | 20/202 | 0.2 | 100% | intergenic (+5/‑18) | hoxW/hoxI | [NiFe] hydrogenase (HoxH‑specific) C‑terminal protease/HoxI |
| ? | AY305378 | 93025 = | NA (NA) | noncoding (1/1313 nt) | ISAE1 | repeat region | |||||
GTGCTGGCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCGAGTATATCGGCCGGGATGGCGCTGCCATTCTTGCCGAACAC > AY305378/84693‑84933 | gacgaaccacggatcgcttatgccaagggctgcttcaaacagtttgctatgcatcgctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAg < 1:1020269‑M1/16‑1 (MQ=255) cGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaat < 1:154918‑M1/134‑17 (MQ=255) tCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgag > 1:1002545‑M1/1‑115 (MQ=255) gcttatgccaagggctgcttcaaacagtttgctatgcatcgctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGaaa > 1:636352‑M1/103‑133 (MQ=255) ggAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaat < 1:908‑M1/115‑17 (MQ=255) ggAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaat > 2:908‑M1/1‑99 (MQ=255) ctgcttcaaacagtttgctatgcatcgctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGa < 2:660299‑M1/45‑1 (MQ=255) tgcttcaaacagtttgctatgcatcgctcttgttgctctttaccttaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGgag > 1:23638‑M1/88‑106 (MQ=255) tgcttcaaacagtttgctatgcatcgctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGgag < 2:23638‑M1/19‑1 (MQ=255) gcttcaaacagtttgctatgcatcgctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAg < 1:52927‑M1/48‑1 (MQ=255) caaacagtttgctatgcatcgctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATc < 2:258227‑M1/52‑1 (MQ=255) aaacagtttgctatgcatcgctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAgg < 1:192916‑M1/17‑1 (MQ=255) aaacagtttgctatgcatcgctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAgg > 2:192916‑M1/82‑98 (MQ=255) acCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtc > 2:211507‑M1/1‑78 (MQ=255) acCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaat < 2:37652‑M1/94‑17 (MQ=255) acCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaat > 1:37652‑M1/1‑78 (MQ=255) cGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaat > 1:180855‑M1/1‑76 (MQ=255) cGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaat < 2:180855‑M1/92‑17 (MQ=255) catcgctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTAc < 1:130313‑M1/67‑1 (MQ=255) gCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCTGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagcttt > 2:1063432‑M1/1‑71 (MQ=255) gCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaa < 1:945419‑M1/85‑15 (MQ=255) gCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaa > 2:945419‑M1/1‑71 (MQ=255) cACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggt > 2:382155‑M1/1‑70 (MQ=255) cACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggt < 1:382155‑M1/110‑41 (MQ=255) cttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCa < 2:374904‑M1/55‑1 (MQ=255) cttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCa > 1:374904‑M1/60‑114 (MQ=255) tgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCtt < 1:831863‑M1/77‑1 (MQ=255) gttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCtt > 1:660299‑M1/57‑133 (MQ=255) aTAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcga < 2:1002545‑M1/134‑71 (MQ=255) tAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgat > 2:451185‑M1/1‑63 (MQ=255) tgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTgg < 2:388403‑M1/80‑1 (MQ=255) ctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAg > 1:743943‑M1/53‑61 (MQ=255) ctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAg < 2:743943‑M1/9‑1 (MQ=255) tttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGaaa < 2:573396‑M1/41‑1 (MQ=255) tttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGaaa > 1:573396‑M1/50‑90 (MQ=255) gACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaag < 1:451185‑M1/134‑79 (MQ=255) acctgaaacccgccacgataccacccacttgaaattcaaaagaggcTg < 1:876834‑M1/2‑1 (MQ=255) acctgaaacccgccacgataccacccacttgaaattcaaaagaggcTg > 2:876834‑M1/47‑48 (MQ=255) ctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCGAGTatat > 2:130313‑M1/45‑134 (MQ=255) aTGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagatca < 2:679454‑M1/134‑83 (MQ=255) aTGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagatca < 2:360866‑M1/134‑83 (MQ=255) tGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagatcac > 2:83528‑M1/1‑51 (MQ=255) aTCGCCCATTTCTCGATGCGGGCTGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagatcacggtg < 1:1063432‑M1/134‑88 (MQ=255) aTCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAAt > 1:765176/1‑45 (MQ=255) aTCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAAt < 2:765176/45‑1 (MQ=255) aTCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaa > 2:911723‑M1/1‑47 (MQ=255) aTCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaa < 1:911723‑M1/61‑15 (MQ=255) cccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCGAGTATATCGGCCg < 1:685247‑M1/96‑1 (MQ=255) aTTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagatcacggtgcgcatgg < 1:211507‑M1/134‑95 (MQ=255) aTTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagatcacggtgcgcatgg < 1:83528‑M1/134‑95 (MQ=255) gATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagatcacggtgcgcatggttttg < 2:573537‑M1/132‑100 (MQ=255) cacttgaaattcaaaagaggcTGAAATCAGTTAGAAgg > 2:139480‑M1/22‑38 (MQ=255) cacttgaaattcaaaagaggcTGAAATCAGTTAGAAgg < 1:139480‑M1/17‑1 (MQ=255) gggCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagat > 1:229194‑M1/1‑28 (MQ=255) gggCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagat < 2:229194‑M1/108‑81 (MQ=255) gaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCGAGTATATCGGCCGGGATGGCGCTGCCATTCTTGc > 2:685247‑M1/17‑133 (MQ=255) gaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCGAGTATATCGGCCGGGATGGCGCTGCCATTCTTGc > 1:258227‑M1/17‑133 (MQ=255) aattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCGAGTATATCGGCCGGGATGGCGCTGCCATTCTTGCCg < 1:1025899‑M1/119‑1 (MQ=255) aaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCGAGTATATCGGCCGGGATGGCGCTGCCATTCTTGCCGAacac > 1:388403‑M1/10‑133 (MQ=255) | GTGCTGGCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCGAGTATATCGGCCGGGATGGCGCTGCCATTCTTGCCGAACAC > AY305378/84693‑84933 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |