| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | AY305378 | 84,810 | ISAE1 (+) +8 bp | [hoxW] | [hoxW] | |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AY305378 | 84810 = | 0 (0.000) | 24 (1.110) | 21/214 | 0.2 | 100% | coding (496/498 nt) | hoxW | [NiFe] hydrogenase (HoxH‑specific) C‑terminal protease |
| ? | AY305378 | = 94337 | NA (NA) | noncoding (1313/1313 nt) | ISAE1 | repeat region | |||||
| * | ? | AY305378 | = 84817 | 0 (0.000) | 24 (1.130) | 18/212 | 0.2 | 100% | intergenic (+5/‑18) | hoxW/hoxI | [NiFe] hydrogenase (HoxH‑specific) C‑terminal protease/HoxI |
| ? | AY305378 | 93025 = | NA (NA) | noncoding (1/1313 nt) | ISAE1 | repeat region | |||||
TGCTGGCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AY305378/84694‑84817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTTTGAAGCTCACATAACCGCGG > AY305378/93025‑93141 TGCTGGCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTT < 2:350720/133‑1 CTGGCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGA > 1:690099/1‑133 GCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAA < 2:206913/133‑1 CACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTC > 2:951762/1‑134 CACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTT < 2:998167/79‑1 CACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTT > 1:998167/1‑79 GCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGC > 1:575231/1‑134 GCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGC > 1:816406/1‑134 ATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGA < 2:6451/134‑1 AACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGAT > 1:1075594/1‑133 AACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGAT > 2:614593/1‑133 GACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAG < 2:690099/134‑1 CGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGAT < 1:951762/134‑1 GATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGAT > 1:584066/1‑133 TGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCAC > 1:478338/1‑134 TGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTA > 1:716857/1‑77 TGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACATCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTA < 2:716857/77‑1 ATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTTGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTG < 2:307023/134‑1 ATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTG < 1:114756/134‑1 ATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTG > 2:114756/1‑134 CTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTT < 2:575231/133‑1 CGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAA < 2:252373/44‑1 CGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAA > 1:252373/1‑44 AAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTTTGAAGCTCACATAACCGCGG < 2:177569/133‑1 TGCTGGCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AY305378/84694‑84817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTTTGAAGCTCACATAACCGCGG > AY305378/93025‑93141 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |