| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | AY305378 | 84,810 | ISAE1 (+) +8 bp | [hoxW] | [hoxW] | |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AY305378 | 84810 = | 0 (0.000) | 24 (1.110) | 21/214 | 0.2 | 100% | coding (496/498 nt) | hoxW | [NiFe] hydrogenase (HoxH‑specific) C‑terminal protease |
| ? | AY305378 | = 94337 | NA (NA) | noncoding (1313/1313 nt) | ISAE1 | repeat region | |||||
| * | ? | AY305378 | = 84817 | 0 (0.000) | 24 (1.130) | 18/212 | 0.2 | 100% | intergenic (+5/‑18) | hoxW/hoxI | [NiFe] hydrogenase (HoxH‑specific) C‑terminal protease/HoxI |
| ? | AY305378 | 93025 = | NA (NA) | noncoding (1/1313 nt) | ISAE1 | repeat region | |||||
GTGCTGGCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCGAGTATATCGGCCGGGATGGCGCTGCCATTCTTGCCGAACACG > AY305378/84693‑84934 | gacgaaccacggatcgcttatgccaagggctgcttcaaacagtttgctatgcatcgctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAGATCAGTTAGAAgg > 1:18725‑M1/118‑134 (MQ=255) tgCTGGCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctctttt < 2:350720‑M1/133‑10 (MQ=255) cTGGCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttga > 1:690099‑M1/1‑122 (MQ=255) gCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaa < 2:206913‑M1/133‑15 (MQ=255) ggatcgcttatgccaagggctgcttcaaacagtttgctatgcatcgctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGAt < 2:948896‑M1/27‑1 (MQ=255) tgccaagggctgcttcaaacagtttgctatgcatcgctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAg < 2:736979‑M1/37‑1 (MQ=255) aacagtttgctatgcatcgctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGc > 2:484033‑M1/81‑134 (MQ=255) aacagtttgctatgcatcgctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGc > 1:368072‑M1/81‑134 (MQ=255) cgctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTg < 1:25431‑M1/2‑1 (MQ=255) cgctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTg > 2:25431‑M1/64‑65 (MQ=255) cACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttc > 2:951762‑M1/1‑70 (MQ=255) cACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctctttt < 2:998167‑M1/79‑10 (MQ=255) cACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctctttt > 1:998167‑M1/1‑70 (MQ=255) ctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTa < 1:906782‑M1/66‑1 (MQ=255) ctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTa > 2:906782‑M1/62‑127 (MQ=255) ctcttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGgcg < 2:457685‑M1/73‑1 (MQ=255) cttgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGcc < 1:585391‑M1/75‑1 (MQ=255) gCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggc > 1:816406‑M1/1‑66 (MQ=255) gCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggc > 1:575231‑M1/1‑66 (MQ=255) tgttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCtt < 2:276457‑M1/77‑1 (MQ=255) aTAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcga < 2:6451‑M1/134‑71 (MQ=255) ttgctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTg > 1:930793‑M1/56‑134 (MQ=255) aaCCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgat > 2:614593‑M1/1‑62 (MQ=255) aaCCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgat > 1:1075594‑M1/1‑62 (MQ=255) gctctttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTgg > 1:736979‑M1/54‑133 (MQ=255) tttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCa < 1:586690‑M1/36‑1 (MQ=255) tttacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCa > 2:586690‑M1/50‑85 (MQ=255) gACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaag < 2:690099‑M1/134‑79 (MQ=255) tacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCGAg > 2:306584‑M1/48‑132 (MQ=255) tacctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCGAg > 1:263121‑M1/48‑132 (MQ=255) cGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagat < 1:951762‑M1/134‑81 (MQ=255) acctgaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCGAGta < 2:601459‑M1/87‑1 (MQ=255) gATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagat > 1:584066‑M1/1‑53 (MQ=255) aTGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAAt < 2:784754/50‑1 (MQ=255) aTGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAAt > 1:784754/1‑50 (MQ=255) tGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagatcac > 1:478338‑M1/1‑51 (MQ=255) tGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggtta > 1:716857‑M1/1‑51 (MQ=255) tGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACATCGTGAAATCAggctcttttgaaaaatgagtgggtta < 2:716857‑M1/77‑27 (MQ=255) gaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCg > 2:1154416‑M1/43‑86 (MQ=255) gaaacccgccacgataccacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCg < 1:1154416‑M1/44‑1 (MQ=255) aTCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagttggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagatcacggtg < 2:307023‑M1/134‑88 (MQ=255) aTCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagatcacggtg > 2:114756‑M1/1‑47 (MQ=255) aTCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagatcacggtg < 1:114756‑M1/134‑88 (MQ=255) ctcGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagatcacggtgcgcatggttt < 2:575231‑M1/133‑98 (MQ=255) accacccacttgaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCGAGTATATCGGCCGGGATGGCGCTg < 2:704201‑M1/107‑1 (MQ=255) cGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaa < 2:252373‑M1/44‑16 (MQ=255) cGGGCCGAGCGTCAAACCTCGTGAAATCAggctcttttgaaaaa > 1:252373‑M1/1‑29 (MQ=255) gaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCGAGTATATCGGCCGGGATGGCGCTGCCATTCTTGcc < 2:1085032‑M1/118‑1 (MQ=255) gaaattcaaaagaggcTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCGAGTATATCGGCCGGGATGGCGCTGCCATTCTTGc > 1:601459‑M1/17‑133 (MQ=255) aaaCCTCGTGAAATCAggctcttttgaaaaatgagtgggttatgcggcatgcgggttgatcgcggagaagtcgagctttccggcgatcaggaagatcacggtgcgcatggttttgaagctcacataaccgcgg < 2:177569‑M1/133‑118 (MQ=255) | GTGCTGGCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGTTAGAAGGAGAACGCGATGAAAGAGCAGGAAATCGACAGGATCGCAACGATGATCTACGAGGCGCCTTTGGGCGAGTATATCGGCCGGGATGGCGCTGCCATTCTTGCCGAACACG > AY305378/84693‑84934 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |