Predicted mutation
evidence seq id position mutation annotation gene description
MC JC CP009974 2,509,653 Δ2,602 bp RPPX_11210[RPPX_11220] RPPX_11210, RPPX_11215, [RPPX_11220]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP009974 2509653–2512249 2512254 6–2602 277 [0] [0] 275 RPPX_11210–[RPPX_11220] RPPX_11210,RPPX_11215,[RPPX_11220]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009974 = 25096520 (0.000)266 (1.050) 171/288 0.0 100% intergenic (+3590/‑204) RPPX_11200/RPPX_11210 beta‑aspartyl peptidase/integrase
?CP009974 2512255 = 0 (0.000)coding (24/1236 nt) RPPX_11220 hypothetical protein

Only 100 of 284 total aligned reads displayed.

GAAGTTGCTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009974/2509497‑2509652
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCTGTGA  >  CP009974/2512255‑2512404
                                                                                                                                                                                                                                                                                                                  
GAAGTTGCTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTC                                                                                                                                                             <  2:1353875/151‑1
GAAGATGCTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTC                                                                                                                                                             >  2:4319603/1‑151
       CTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCC                                                                                                                                                      <  1:1141333/151‑1
         TGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGG                                                                                                                                                    >  2:812675/1‑151
            AGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTT                                                                                                                                                 >  1:3145580/1‑151
            AGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTT                                                                                                                                                 >  1:2415257/1‑151
             GAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGccttt                                                                                                                                                >  1:2983427/1‑146
              AGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTT                                                                                                                                               <  1:3693799/151‑1
               GCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTT                                                                                                                                              <  1:905355/151‑1
               GCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTT                                                                                                                                              >  2:4192217/1‑151
               GCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTT                                                                                                                                              >  2:1735906/1‑151
                CAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTC                                                                                                                                             <  2:188194/151‑1
                    CCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGC                                                                                                                                         <  1:1476958/151‑1
                      AGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCA                                                                                                                                       >  1:2358923/1‑151
                        GATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTACCCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATG                                                                                                                                     <  1:494805/151‑1
                        GATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATG                                                                                                                                     <  2:3348017/151‑1
                        GATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATG                                                                                                                                     >  1:3857040/1‑151
                         ATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCTATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGG                                                                                                                                    <  1:471881/151‑1
                            gtgGATGGCGCCAGGCGGCGGGAGGGTCTGTGGGCTGTAACCGATGTCGACATGCGAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGC                                                                                                                                 <  2:5111910/148‑1
                            ATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGC                                                                                                                                 >  1:956789/1‑151
                            ATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATCGGGC                                                                                                                                 >  2:2659084/1‑151
                                  GTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCG                                                                                                                           <  1:2034216/151‑1
                                   TCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGA                                                                                                                          >  1:4048209/1‑151
                                     TCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGC                                                                                                                        >  2:2755040/1‑151
                                     TCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGC                                                                                                                        >  1:3445264/1‑151
                                      CCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCT                                                                                                                       >  1:1856530/1‑151
                                       CAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTG                                                                                                                      >  1:5176184/1‑151
                                       CAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTG                                                                                                                      <  1:3662817/151‑1
                                       CAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTCTTCAGGCCATGGGGCCGGTCCAGCTG                                                                                                                      >  2:3019079/1‑151
                                        AGCCAGCTGGATCGTCTGTTGGCGGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGG                                                                                                                     <  1:1314918/151‑1
                                                 GATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGT                                                                                                            <  1:1581431/151‑1
                                                  ATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGgg                                                                                                           >  2:139816/1‑149
                                                   TCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGG                                                                                                          <  1:700996/151‑1
                                                    CGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGC                                                                                                         >  2:3849606/1‑151
                                                          TTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAG                                                                                                   <  2:3565986/151‑1
                                                           TGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGG                                                                                                  <  1:3970099/151‑1
                                                              CTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGC                                                                                               <  1:3777031/151‑1
                                                              CTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGC                                                                                               >  2:2929327/1‑151
                                                              CTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGC                                                                                               <  1:3017026/151‑1
                                                               TGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCG                                                                                              >  1:1046326/1‑151
                                                                GTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGT                                                                                             >  2:1257129/1‑151
                                                                 TAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTC                                                                                            <  1:1007853/151‑1
                                                                  AACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCC                                                                                           <  2:3750929/151‑1
                                                                    CCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCAC                                                                                         >  1:4516221/1‑151
                                                                     CGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACC                                                                                        >  1:2775699/1‑151
                                                                      GATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCCTCGGGCTGGTCGCGCTGTCCCTTCAGTGGCGCAAAGGTGCGTCCCCCC                                                                                       >  2:460343/1‑151
                                                                       ATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCA                                                                                      <  2:3145580/151‑1
                                                                        TATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAA                                                                                     >  2:69734/1‑151
                                                                        TATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAA                                                                                     <  2:4270399/151‑1
                                                                         ATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAAC                                                                                    <  1:4541747/151‑1
                                                                         ATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAAC                                                                                    >  1:65762/1‑151
                                                                            GACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACc                                                                                 >  2:2130672/1‑150
                                                                             ACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTA                                                                                >  1:2161493/1‑151
                                                                             ACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTA                                                                                >  1:1249359/1‑151
                                                                                TGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACAT                                                                             <  2:2446148/151‑1
                                                                                TGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACAT                                                                             >  2:1159946/1‑151
                                                                                   AAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGAT                                                                          >  1:3021369/1‑151
                                                                                    AGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATC                                                                         >  2:2861264/1‑151
                                                                                     GTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCT                                                                        <  1:3359849/151‑1
                                                                                      TGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTT                                                                       <  1:3652933/151‑1
                                                                                      TGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACACGATCTT                                                                       >  1:4293252/1‑151
                                                                                       GCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTT                                                                      >  2:4020833/1‑151
                                                                                        CCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTC                                                                     >  2:147874/1‑151
                                                                                        CCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTC                                                                     <  1:265265/151‑1
                                                                                        CCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTC                                                                     <  1:2023733/151‑1
                                                                                          TTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGC                                                                   >  1:569276/1‑151
                                                                                            ATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGA                                                                 >  1:4395957/1‑151
                                                                                            ATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGA                                                                 >  2:4721457/1‑151
                                                                                             TGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGAT                                                                <  2:4523404/151‑1
                                                                                              GTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATG                                                               <  2:1254270/151‑1
                                                                                              GTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATG                                                               >  1:3082878/1‑151
                                                                                                  ATGCCACCTTGAGCGTCTCGGGCGTTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACT                                                           <  2:2379736/151‑1
                                                                                                   TGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTC                                                          <  1:3566176/151‑1
                                                                                                    GCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTTATTTTTTTGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCG                                                         >  2:1777493/1‑151
                                                                                                    GCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCG                                                         <  1:4482116/151‑1
                                                                                                    GCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCG                                                         <  1:1640780/151‑1
                                                                                                      CACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCC                                                       >  2:3665428/1‑151
                                                                                                        CCTTGAGCGTCGCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGG                                                     <  2:4363568/151‑1
                                                                                                             AGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATC                                                <  2:4773940/151‑1
                                                                                                             AGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTCGCGCAAAGGTGCGTCCACCCAACACCACATGATCTTTCGCGATGCACCCGCCGGTCATC                                                >  2:1931660/1‑151
                                                                                                              GCGTCTCGCGCATTAACAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCG                                               <  2:2271334/151‑1
                                                                                                                 gCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTT                                            <  2:111964/150‑1
                                                                                                                  CTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGCTTG                                           >  2:4869702/1‑151
                                                                                                                   TCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGC                                          >  1:3293340/1‑151
                                                                                                                   TCGGGCATTATCAGTAAGCGCACGACGACTACGGTCAACATCTGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGC                                          <  2:1292971/151‑1
                                                                                                                         ATTATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGG                                    >  2:209164/1‑151
                                                                                                                         ATTATCAGTAAGCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCCACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGG                                    <  1:2530983/151‑1
                                                                                                                           TATCAGTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCC                                  <  2:248286/151‑1
                                                                                                                                GTAATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGCCCTCGTTTGCGGGCGGCCGCGCA                             >  2:3722051/1‑151
                                                                                                                                  AATCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGA                           >  2:4155868/1‑151
                                                                                                                                    TCGCACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACG                         <  1:4548633/151‑1
                                                                                                                                        ACGACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATA                     <  1:2477984/151‑1
                                                                                                                                           ACGACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATC                  >  1:1938441/1‑151
                                                                                                                                              ACTACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGC               >  1:5237022/1‑151
                                                                                                                                                 ACGGTCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGA            >  1:2080937/1‑151
                                                                                                                                                     TCAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTT        <  2:5176184/151‑1
                                                                                                                                                       AACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCT      >  1:1440780/1‑151
                                                                                                                                                          ATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCTGTG   <  1:1735906/151‑1
                                                                                                                                                          ATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCTGTG   <  1:4192217/151‑1
                                                                                                                                                          ATCCGATGTTTGCAGGCCATGGGGCTGGTGGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGTCGCATAATCTGCTGATGTTCTGTG   <  2:2183205/151‑1
                                                                                                                                                                                                                                                                                                                  
GAAGTTGCTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009974/2509497‑2509652
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCTGTGA  >  CP009974/2512255‑2512404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.