BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	CP009974	2,509,653	Δ2,602 bp		RPPX_11210–[RPPX_11220]	RPPX_11210, RPPX_11215, [RPPX_11220]

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009974	2509653–2512249	2512254	6–2602	277 [0]	[0] 275	RPPX_11210–[RPPX_11220]	RPPX_11210,RPPX_11215,[RPPX_11220]

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009974	= 2509652	0 (0.000)	266 (1.050)	171/288	0.0	100%	intergenic (+3590/‑204)	RPPX_11200/RPPX_11210	beta‑aspartyl peptidase/integrase
*	?	CP009974	2512255 =	0 (0.000)	266 (1.050)	171/288	0.0	100%	coding (24/1236 nt)	RPPX_11220	hypothetical protein

Only 100 of 275 total aligned reads displayed.

GGACGCAGAAATTGACGACGCCAGCCAACCCGGACTAACAATGCCACCCCTGCGTCGCTGCGCTCCGACTGCCTGTCCGAATGAGCGTGGAACAGGTGTCCGGATCAGCGTGGGCTGAGTGTCCGAATGGCGTGGAATCCGCACAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCTGTGA  >  CP009974/2512106‑2512404

cttgaagagcagcccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatcc                                                                                                                                                      >  1:3863008‑M2/150‑151 (MQ=255)

cttgaagagcagcccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatcc                                                                                                                                                      <  1:1141333‑M2/2‑1 (MQ=255)

cttgaagagcagcccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatcc                                                                                                                                                      <  2:374146‑M2/2‑1 (MQ=255)

 ttgaagagcagcccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCg                                                                                                                                                     <  1:455342‑M2/3‑1 (MQ=255)

  tgaagagcagcccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCgg                                                                                                                                                    >  2:812675‑M2/148‑151 (MQ=255)

  tgaagagcagcccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCgg                                                                                                                                                    <  2:1433145‑M2/4‑1 (MQ=255)

     agagcagcccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGttt                                                                                                                                                 >  1:2415258‑M2/145‑151 (MQ=255)

       agcagcccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaacgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGttttt                                                                                                                                               >  2:2014890‑M2/143‑151 (MQ=255)

        gcagcccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGtttttt                                                                                                                                              >  2:4192217‑M2/142‑151 (MQ=255)

         cagcccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTc                                                                                                                                             <  2:1832532‑M2/11‑1 (MQ=255)

             ccaggatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGc                                                                                                                                         >  2:1385468‑M2/137‑151 (MQ=255)

                 gatcatcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATg                                                                                                                                     <  2:3348017‑M2/19‑1 (MQ=255)

                  atcatcgatgtctccagccagctggatcgtctgttggctgtaacctatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATgg                                                                                                                                    <  1:471881‑M2/20‑1 (MQ=255)

                     atcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGc                                                                                                                                 >  1:956789‑M2/129‑151 (MQ=255)

                     atcgatgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATCGGGc                                                                                                                                 >  2:2659084‑M2/129‑151 (MQ=255)

                          tgtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTc                                                                                                                            <  1:2179217‑M2/28‑1 (MQ=255)

                           gtctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCg                                                                                                                           <  1:3624976‑M2/29‑1 (MQ=255)

                            tctccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGa                                                                                                                          >  1:4048209‑M2/122‑151 (MQ=255)

                              tccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGc                                                                                                                        >  2:2755040‑M2/120‑151 (MQ=255)

                               ccagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCt                                                                                                                       >  1:1856530‑M2/119‑151 (MQ=255)

                                cagccagctggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTCTTCAGGCCATGGGGCCGGTCCAGCTg                                                                                                                      >  2:3019079‑M2/118‑151 (MQ=255)

                                 agccagctggatcgtctgttggcggtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTgg                                                                                                                     <  1:1314918‑M2/35‑1 (MQ=255)

                                      gctggatcggcggttggctgtaaccgatatcgacatgcaagtgccgtatgtcaatgcccccttgagcgtctcgggcattatgagtaatcgcacggcgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGGCCTg                                                                                                                <  2:3974278‑M2/40‑1 (MQ=255)

                                        tggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCa                                                                                                              <  1:2874635‑M2/42‑1 (MQ=255)

                                        tggatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTGTTTTCAGGCCATGGGGCTGGTCGAGCTTGCCCTGCa                                                                                                              >  2:3599925‑M2/110‑151 (MQ=255)

                                          gatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGt                                                                                                            <  1:1581431‑M2/44‑1 (MQ=255)

                                          gatcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGt                                                                                                            <  1:2404868‑M2/44‑1 (MQ=255)

                                           atcgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTg                                                                                                           <  1:3352241‑M2/45‑1 (MQ=255)

                                             cgtctgttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGgc                                                                                                         >  1:930386‑M2/105‑151 (MQ=255)

                                                  gttggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCaaa                                                                                                    <  1:1449532‑M2/52‑1 (MQ=255)

                                                     ggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGt                                                                                                 >  1:3191769‑M2/97‑151 (MQ=255)

                                                     ggctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGt                                                                                                 >  2:2292278‑M2/97‑151 (MQ=255)

                                                       ctgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGc                                                                                               >  1:2114902‑M2/95‑151 (MQ=255)

                                                        tgtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCg                                                                                              >  1:1046326‑M2/94‑151 (MQ=255)

                                                         gtaaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGt                                                                                             >  2:1257129‑M2/93‑151 (MQ=255)

                                                          taaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTc                                                                                            <  1:1007853‑M2/60‑1 (MQ=255)

                                                          taaccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTATTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTc                                                                                            <  2:4895250‑M2/60‑1 (MQ=255)

                                                             ccgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCAc                                                                                         >  1:4516221‑M2/89‑151 (MQ=255)

                                                              cgatatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCAcc                                                                                        >  1:2775699‑M2/88‑151 (MQ=255)

                                                                atatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCa                                                                                      <  2:3145580‑M2/66‑1 (MQ=255)

                                                                 tatcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCaa                                                                                     >  2:69734‑M2/85‑151 (MQ=255)

                                                                  atcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAac                                                                                    <  1:4541747‑M2/68‑1 (MQ=255)

                                                                  atcgacatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAac                                                                                    >  1:65762‑M2/84‑151 (MQ=255)

                                                                   tcgacatgcaagtgccctatgtcaatgccaccctgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAaca                                                                                   <  2:3705779‑M2/69‑1 (MQ=255)

                                                                      acatgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTa                                                                                >  1:1249359‑M2/80‑151 (MQ=255)

                                                                       catgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTAc                                                                               >  2:4331447‑M2/79‑151 (MQ=255)

                                                                         tgcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACAt                                                                             >  2:1159946‑M2/77‑151 (MQ=255)

                                                                          gcaagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATg                                                                            >  2:2428466‑M2/76‑151 (MQ=255)

                                                                           caagtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGa                                                                           <  1:5047597‑M2/77‑1 (MQ=255)

                                                                             agtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATc                                                                         >  2:2861264‑M2/73‑151 (MQ=255)

                                                                             agtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATc                                                                         >  1:536833‑M2/73‑151 (MQ=255)

                                                                             agtgccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATc                                                                         >  2:4625210‑M2/73‑151 (MQ=255)

                                                                                gccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCttt                                                                      >  2:4020833‑M2/70‑151 (MQ=255)

                                                                                 ccttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTc                                                                     <  1:265265‑M2/83‑1 (MQ=255)

                                                                                   ttatgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTcgc                                                                   >  1:569276‑M2/67‑151 (MQ=255)

                                                                                     atgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGa                                                                 >  1:351143‑M2/65‑151 (MQ=255)

                                                                                     atgtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGa                                                                 >  2:4721457‑M2/65‑151 (MQ=255)

                                                                                       gtcgatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATg                                                               <  2:1931636‑M2/89‑1 (MQ=255)

                                                                                       gtcaatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATg                                                               <  2:1254270‑M2/89‑1 (MQ=255)

                                                                                         caatgccaccttgagcgtctcgggcattatcagtaatcgcacgccgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATgcc                                                             >  1:2033207‑M2/61‑150 (MQ=255)

                                                                                         caatgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCa                                                             <  1:4431649‑M2/91‑1 (MQ=255)

                                                                                           atgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACt                                                           <  1:3104155‑M2/93‑1 (MQ=255)

                                                                                            tgccaccttgagcgtctcgggcattatcagtaatcgcacgccgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTc                                                          <  2:2145248‑M2/94‑1 (MQ=255)

                                                                                            tgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTc                                                          <  1:3009849‑M2/94‑1 (MQ=255)

                                                                                            tgccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTc                                                          <  1:3406101‑M2/94‑1 (MQ=255)

                                                                                             gccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCg                                                         >  2:428830‑M2/57‑151 (MQ=255)

                                                                                             gccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCg                                                         <  1:1640780‑M2/95‑1 (MQ=255)

                                                                                             gccaccttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCg                                                         <  1:4482116‑M2/95‑1 (MQ=255)

                                                                                                  cttgagcgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTCCATGATCTTTCGCGATGCACTCGCcggg                                                    >  2:4850059‑M2/52‑150 (MQ=255)

                                                                                                        cgtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGt                                              <  1:3077336‑M2/106‑1 (MQ=255)

                                                                                                         gtctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGtt                                             >  1:3781143‑M2/45‑151 (MQ=255)

                                                                                                          gctcgggcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGttt                                            <  2:111964‑M2/108‑1 (MQ=255)

                                                                                                            tcgggcattatcagtaagcgcacgacgactacggtcaacatCTGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGc                                          <  2:1292971‑M2/110‑1 (MQ=255)

                                                                                                                gcattatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGcgggg                                      >  1:3659027‑M2/38‑150 (MQ=255)

                                                                                                                  attatcagtaagcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCCACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTgg                                    <  1:2530983‑M2/116‑1 (MQ=255)

                                                                                                                    tatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGcc                                  <  2:247729‑M2/118‑1 (MQ=255)

                                                                                                                    tatcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGcc                                  >  2:1532810‑M2/34‑151 (MQ=255)

                                                                                                                      tcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCcgc                                <  1:4020833‑M2/120‑1 (MQ=255)

                                                                                                                      tcagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGGCATCGTTTGCGGGCggcccc                                >  2:2959126‑M2/32‑149 (MQ=255)

                                                                                                                       cagtaatcgcacgacgactacggtcaacgtCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCcgcg                               <  2:4581524‑M2/121‑1 (MQ=255)

                                                                                                                       cagtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGccgcc                               >  1:2056499‑M2/31‑150 (MQ=255)

                                                                                                                         gtaatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCa                             >  1:1411585‑M2/29‑151 (MQ=255)

                                                                                                                           aatcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGa                           >  2:4155868‑M2/27‑151 (MQ=255)

                                                                                                                            atcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGAc                          >  2:2092007‑M2/26‑151 (MQ=255)

                                                                                                                             tcgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACg                         >  1:766208‑M2/25‑151 (MQ=255)

                                                                                                                              cgcacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGc                        >  1:4200967‑M2/24‑151 (MQ=255)

                                                                                                                                cacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGTGCAGACGCAt                      >  2:1737853‑M2/22‑151 (MQ=255)

                                                                                                                                cacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCAt                      >  1:5193298‑M2/22‑151 (MQ=255)

                                                                                                                                cacgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCAt                      <  2:2526841‑M2/130‑1 (MQ=255)

                                                                                                                                 acgacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATa                     >  1:3683564‑M2/21‑151 (MQ=255)

                                                                                                                                   gacgactacggtcaacatCCGGTTTTTTCTGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAAt                   >  2:2213378‑M2/19‑151 (MQ=255)

                                                                                                                                   gacgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAAt                   >  1:3767275‑M2/19‑151 (MQ=255)

                                                                                                                                    acgactacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATc                  >  1:1938441‑M2/18‑151 (MQ=255)

                                                                                                                                       actacggtcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATctgc               >  1:4314453‑M2/15‑151 (MQ=255)

                                                                                                                                             gtcaacatCCGGGTTTTTCAGGCCATGGGGCTGGTCGCGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAGCATTATATGATCTTTAGCGATGCACGCGGCGGTCATCGTTTGCGGGTGCCCGCGCAGACGCATAATCCGCAGAtgc         >  2:3814966‑M2/9‑150 (MQ=255)

                                                                                                                                              tcaacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGtt        <  2:5176184‑M2/144‑1 (MQ=255)

                                                                                                                                                aacatCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTCCt      >  2:5153402‑M2/6‑151 (MQ=255)

                                                                                                                                                 acagCCGGTTTTTGCAGGCCATGGGGCTGGCCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCtg     <  1:3019079‑M2/147‑1 (MQ=255)

                                                                                                                                                   atCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCtgtg   <  1:1735906‑M2/149‑1 (MQ=255)

                                                                                                                                                   atCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCtgtg   >  2:4443322‑M2/3‑151 (MQ=255)

GGACGCAGAAATTGACGACGCCAGCCAACCCGGACTAACAATGCCACCCCTGCGTCGCTGCGCTCCGACTGCCTGTCCGAATGAGCGTGGAACAGGTGTCCGGATCAGCGTGGGCTGAGTGTCCGAATGGCGTGGAATCCGCACAACATCCGGTTTTTTCAGGCCATGGGGCTGGTCGAGCTGGCCCTGCAGTGGCGCAAAGGTGCGTCCACCCAACACTACATGATCTTTCGCGATGCACTCGCCGGTCATCGTTTGCGGGTGGCCGCGCAGACGCATAATCTGCTGATGTTCTGTGA  >  CP009974/2512106‑2512404

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`