| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | CP009974 | 2,509,653 | Δ2,602 bp | RPPX_11210–[RPPX_11220] | RPPX_11210, RPPX_11215, [RPPX_11220] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | CP009974 | 2509653–2512249 | 2512254 | 6–2602 | 277 [0] | [0] 275 | RPPX_11210–[RPPX_11220] | RPPX_11210,RPPX_11215,[RPPX_11220] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009974 | = 2509652 | 0 (0.000) | 266 (1.050) | 171/288 | 0.0 | 100% | intergenic (+3590/‑204) | RPPX_11200/RPPX_11210 | beta‑aspartyl peptidase/integrase |
| ? | CP009974 | 2512255 = | 0 (0.000) | coding (24/1236 nt) | RPPX_11220 | hypothetical protein | |||||
Only 100 of 277 total aligned reads displayed.
TGCTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATT > CP009974/2509502‑2509801 | cTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATcc < 1:1141333‑M1/151‑3 (MQ=255) tGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccgg > 2:812675‑M1/1‑147 (MQ=255) tGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCAAGACGACTACGGTCAACATctct > 2:3194873‑M1/1‑147 (MQ=255) agagCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttt > 1:2415258‑M1/1‑144 (MQ=255) agcagcCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAACGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttt > 2:2014890‑M1/1‑142 (MQ=255) gcagcCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggtttttt < 1:905355‑M1/151‑11 (MQ=255) gcagcCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggtttttt > 2:1735906‑M1/1‑141 (MQ=255) gcCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcag < 1:299919‑M1/151‑14 (MQ=255) gATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTACCCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatg < 1:494805‑M1/151‑20 (MQ=255) gATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatg > 1:3857040‑M1/1‑132 (MQ=255) atcatcGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCTATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatgg < 1:471881‑M1/151‑21 (MQ=255) gtggatgGCGCCAGGCGGCGGGAGGGTCTGTGGGCTGTAACCGATGTCGACATGCGAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggc < 2:5111910‑M1/148‑24 (MQ=255) atcGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatcgggc > 2:2659084‑M1/1‑128 (MQ=255) gTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcg < 1:3624976‑M1/151‑30 (MQ=255) tctcCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcga > 1:4048209‑M1/1‑121 (MQ=255) cagccagcTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctg > 1:5176184‑M1/1‑117 (MQ=255) cagccagcTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggtttcttcaggccatggggccggtccagctg > 2:3019079‑M1/1‑117 (MQ=255) agccagcTGGATCGTCTGTTGGCGGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctgg < 1:1314918‑M1/151‑36 (MQ=255) agcTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccct < 1:989891‑M1/151‑40 (MQ=255) tGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgca < 1:2874635‑M1/151‑43 (MQ=255) gATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagt < 1:1581431‑M1/151‑45 (MQ=255) aTCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcaggg > 2:139816‑M1/1‑106 (MQ=255) tCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtgg < 1:700996‑M1/151‑47 (MQ=255) cGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggc > 2:3849606‑M1/1‑104 (MQ=255) gTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaa < 1:1449532‑M1/151‑53 (MQ=255) ttGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaag < 2:3565986‑M1/151‑54 (MQ=255) tGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaagg < 1:3970099‑M1/151‑55 (MQ=255) ggCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggt > 2:2292278‑M1/1‑96 (MQ=255) ggCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggt > 1:3191769‑M1/1‑96 (MQ=255) gCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtg > 1:632197‑M1/1‑95 (MQ=255) cTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgc > 2:2929327‑M1/1‑94 (MQ=255) tGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcg > 1:1046326‑M1/1‑93 (MQ=255) gTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtccgt > 2:1256242‑M1/1‑92 (MQ=255) tAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtc < 1:1007853‑M1/151‑61 (MQ=255) tAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttatttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtc < 2:4895250‑M1/151‑61 (MQ=255) aaCCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtcc < 2:3750929‑M1/151‑62 (MQ=255) ccGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccac < 1:1804260‑M1/151‑64 (MQ=255) ccGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccac > 1:4516221‑M1/1‑88 (MQ=255) ccGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccac > 2:1922605‑M1/1‑88 (MQ=255) cGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacc > 1:2774574‑M1/1‑87 (MQ=255) gATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccctcgggctggtcgcgctgtcccttcagtggcgcaaaggtgcgtcccccc > 2:460343‑M1/1‑86 (MQ=255) gATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccaccc > 2:2694379‑M1/1‑86 (MQ=255) atatCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccaccca < 2:3145580‑M1/151‑67 (MQ=255) tatCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaa < 2:4270399‑M1/151‑68 (MQ=255) tatCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaa > 2:69734‑M1/1‑84 (MQ=255) atCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaac < 1:4541747‑M1/151‑69 (MQ=255) gACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacacc > 2:2130672‑M1/1‑80 (MQ=255) aCATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacacta > 1:1249359‑M1/1‑79 (MQ=255) aCATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacacta > 1:2161493‑M1/1‑79 (MQ=255) cATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactac > 2:4331447‑M1/1‑78 (MQ=255) tGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacat < 2:2446148‑M1/151‑76 (MQ=255) aGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatc > 2:1284258‑M1/1‑72 (MQ=255) tGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctt > 2:1802126‑M1/1‑70 (MQ=255) tGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctt < 1:3652933‑M1/151‑82 (MQ=255) tGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctt > 1:934603‑M1/1‑70 (MQ=255) gCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatcttt > 2:4020833‑M1/1‑69 (MQ=255) ccTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttc < 1:2023733‑M1/151‑84 (MQ=255) ccTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttc > 2:147874‑M1/1‑68 (MQ=255) cTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcg < 1:1877078‑M1/151‑85 (MQ=255) aTGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcga > 1:4395957‑M1/1‑64 (MQ=255) aTGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcga > 1:351143‑M1/1‑64 (MQ=255) aTGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcga > 2:4721457‑M1/1‑64 (MQ=255) aaTGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAATATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcac > 1:2599997‑M1/1‑59 (MQ=255) aTGCCACCTTGAGCGTCTCGGGCGTTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcact < 2:2379736‑M1/151‑94 (MQ=255) aTGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcact < 1:3104155‑M1/151‑94 (MQ=255) gCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcg < 1:1640780‑M1/151‑96 (MQ=255) gCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcg < 1:4482116‑M1/151‑96 (MQ=255) cACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgcc > 2:3665428‑M1/1‑54 (MQ=255) cACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgcc > 1:3071776‑M1/1‑54 (MQ=255) cTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactccatgatctttcgcgatgcactcgccggg > 2:4850059‑M1/1‑51 (MQ=255) gTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtt > 1:3781143‑M1/1‑44 (MQ=255) tcGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgc > 2:1158005‑M1/1‑41 (MQ=255) cGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcg < 2:1227048‑M1/151‑112 (MQ=255) gggCATTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgg > 1:546104‑M1/1‑39 (MQ=255) aTTATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtgg > 2:209164‑M1/1‑35 (MQ=255) tATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggcc < 2:248286‑M1/151‑119 (MQ=255) tATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggcc > 1:3404260‑M1/1‑33 (MQ=255) tATCAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggcc > 2:3726417‑M1/1‑33 (MQ=255) cAGTAATCGCACGACGACTACGGTCAACGTccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcg < 2:4581524‑M1/151‑122 (MQ=255) cAGTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcc > 1:2056499‑M1/1‑30 (MQ=255) gTAATCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgca > 1:1411585‑M1/1‑28 (MQ=255) aaTCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcaga > 2:4155868‑M1/1‑26 (MQ=255) aaTCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcaga < 1:3309184‑M1/151‑126 (MQ=255) tCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacg > 1:5204813‑M1/1‑24 (MQ=255) tCGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacg < 1:4548633‑M1/151‑128 (MQ=255) cGCACGACGACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgc > 1:4200967‑M1/1‑23 (MQ=255) acgacgACTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcata < 1:2477984‑M1/151‑132 (MQ=255) cgacgaCTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataa < 1:2395531‑M1/151‑133 (MQ=255) gacgacTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataat > 1:3767275‑M1/1‑18 (MQ=255) acTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgc > 1:4314453‑M1/1‑14 (MQ=255) cTACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgct < 2:2800178‑M1/151‑139 (MQ=255) tACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctg > 1:1734704‑M1/1‑12 (MQ=255) tACGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctg < 1:367338‑M1/151‑140 (MQ=255) aCGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctga > 1:2080937‑M1/1‑11 (MQ=255) cGGTCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctgat < 2:4184903‑M1/151‑142 (MQ=255) gTCCACATccggttttttcaggccatggggctggttgagctggcgctgcagtggcgcaaaggtgcgtccaccccacactacatgatctttcgcgatgcccttgccggttatcgtttgcgggtggctgcgtagacgcctaaactgcggaagt > 2:1312655‑M1/1‑8 (MQ=255) tCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcctcgtttgcgggtggccgcgcagacgcataatctgctgatgtt > 1:3017864‑M1/1‑7 (MQ=255) tCAACATccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctgatgtt < 2:5176184‑M1/151‑145 (MQ=255) aTccggttttttcaggccatggggctggtcgagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagacgcataatctgctgatgttctgtg > 2:4443322‑M1/1‑2 (MQ=255) aTccgatgtttgcaggccatggggctggtggagctggccctgcagtggcgcaaaggtgcgtccacccaacactacatgatctttcgcgatgcactcgccggtcatcgtttgcgggtggccgcgcagtcgcataatctgctgatgttctgtg < 2:2183205‑M1/151‑150 (MQ=255) | TGCTTGAAGAGCAGCCCAGGATCATCGATGTCTCCAGCCAGCTGGATCGTCTGTTGGCTGTAACCGATATCGACATGCAAGTGCCTTATGTCAATGCCACCTTGAGCGTCTCGGGCATTATCAGTAATCGCACGACGACTACGGTCAACATTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATT > CP009974/2509502‑2509801 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |