BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	CP009974	1,901,507	Δ2,603 bp		[RPPX_08485]–RPPX_08495	[RPPX_08485], RPPX_08490, RPPX_08495

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP009974	1901507–1904102	1904109	8–2603	277 [0]	[0] 273	[RPPX_08485]–RPPX_08495	[RPPX_08485],RPPX_08490,RPPX_08495

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009974	= 1901506	0 (0.000)	265 (1.060)	158/286	0.2	100%	coding (409/426 nt)	RPPX_08485	hypothetical protein
*	?	CP009974	1904110 =	0 (0.000)	265 (1.060)	158/286	0.2	100%	intergenic (+113/‑1737)	RPPX_08495/RPPX_08505	ATPase AAA/hemolysin secretion protein D

Only 100 of 277 total aligned reads displayed.

ATGCTGCTGCTCAAGGAGGGCCGCAGCGCCGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTC  >  CP009974/1901356‑1901656

aTGCTGCTGCTCAAGGAGGGCCGCAGCGCCGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCG                                                                                                                                                        >  2:5061860‑M1/1‑151 (MQ=255)

 tgctgctgcTCAAGGAGGGCCGCAGCGCCGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGc                                                                                                                                                       <  1:2858593‑M1/151‑2 (MQ=255)

 tgctgctgcTCAAGGAGGGCCGCAGCGCCGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGc                                                                                                                                                       <  2:1671893‑M1/151‑2 (MQ=255)

   ctgctgctCAAGGAGGGCCGCAGCGCCGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgc                                                                                                                                                     >  2:1038266‑M1/1‑148 (MQ=255)

    tgctgctCGAGGAGGGCCGCAGCGCGGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCGGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTGCTTCGcgca                                                                                                                                                    <  2:2897429‑M1/151‑5 (MQ=255)

        gctCAAGGAGGGCCGCAGCGCCGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccg                                                                                                                                                >  1:3057175‑M1/1‑143 (MQ=255)

         ctCAAGGAGGGCCGCAGCGCCGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgc                                                                                                                                               >  1:5018665‑M1/1‑142 (MQ=255)

            aaGGAGGGCCGCAGCGCCGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagc                                                                                                                                            >  1:1758562‑M1/1‑139 (MQ=255)

            aaGGAGGGCCGCAGCGCCGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACCCAGCGAGCGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCCAAGCGACTACAGCCGCCGCGTGTTCTTCGcgcagccgcagc                                                                                                                                            >  2:2304307‑M1/1‑139 (MQ=255)

              ggaggGCCGCAGCGCCGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcac                                                                                                                                          <  1:3144236‑M1/151‑15 (MQ=255)

                     cGCAGCGCCGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcg                                                                                                                                   <  1:714101‑M1/151‑22 (MQ=255)

                        aGCGCCGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatg                                                                                                                                <  1:2261236‑M1/151‑25 (MQ=255)

                          cgcCGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtc                                                                                                                              <  1:5092540‑M1/151‑27 (MQ=255)

                           gcCGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtca                                                                                                                             >  2:5196552‑M1/1‑124 (MQ=255)

                           gcCGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttagatgtca                                                                                                                             >  2:3217918‑M1/1‑124 (MQ=255)

                               tCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaacca                                                                                                                         <  1:2593898‑M1/151‑32 (MQ=255)

                               gcctGCTCGGCTGGGAGAACGATGCCACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaacca                                                                                                                         <  1:3476189‑M1/150‑32 (MQ=255)

                                ccTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccat                                                                                                                        <  2:3541109‑M1/151‑33 (MQ=255)

                                ccTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccat                                                                                                                        <  1:3656895‑M1/151‑33 (MQ=255)

                                 cTGGTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatg                                                                                                                       <  2:793185‑M1/151‑34 (MQ=255)

                                   gCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggc                                                                                                                     <  1:1059201‑M1/151‑36 (MQ=255)

                                   gCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggc                                                                                                                     <  2:1101834‑M1/151‑36 (MQ=255)

                                     tCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaa                                                                                                                   <  1:3789846‑M1/151‑38 (MQ=255)

                                     gcgggggggagagcgAGGAGACCGCGGGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaa                                                                                                                   <  2:3040900‑M1/145‑38 (MQ=255)

                                      cGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaac                                                                                                                  <  2:3425196‑M1/151‑39 (MQ=255)

                                       ggCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacc                                                                                                                 <  1:3377135‑M1/151‑40 (MQ=255)

                                        gCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacct                                                                                                                <  1:39122‑M1/151‑41 (MQ=255)

                                          tGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCTTGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgctgccgcagcacaagtgcgatgtcacccatggcaccctca                                                                                                              >  2:1388166‑M1/1‑109 (MQ=255)

                                          tGGGAGAACGATGACACCGCGCGCCCGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGCGTTCTTCGcgcagccgcagcacaaggtcgatgacaaccatgccaacctca                                                                                                              >  2:3875060‑M1/1‑109 (MQ=255)

                                            ggAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatc                                                                                                            <  1:1212985‑M1/151‑45 (MQ=255)

                                               gaACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatccca                                                                                                         <  2:427353‑M1/151‑48 (MQ=255)

                                                 aCGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacg                                                                                                       <  1:872837‑M1/151‑50 (MQ=255)

                                                  cGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacga                                                                                                      >  2:131983‑M1/1‑101 (MQ=255)

                                                   gATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgag                                                                                                     >  1:2369109‑M1/1‑100 (MQ=255)

                                                     tGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcg                                                                                                   <  2:1238987‑M1/151‑54 (MQ=255)

                                                     tGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaaccgcatcccacgagcg                                                                                                   >  2:4753150‑M1/1‑98 (MQ=255)

                                                       acacCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaa                                                                                                 >  1:2041617‑M1/1‑96 (MQ=255)

                                                       acaaCGCGCGCGTGCTGCGCAGCGAGAGCGACGGTGGCGAGGGGCATGTGAGCCGCGAAGCACTGCTAAGCGACTACAGGGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaa                                                                                                 <  2:4351674‑M1/151‑56 (MQ=255)

                                                          ccGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtc                                                                                              >  1:3345169‑M1/1‑93 (MQ=255)

                                                           cgcgcgCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcg                                                                                             >  2:2222733‑M1/1‑92 (MQ=255)

                                                             cgcgcCTGCTACTCAGCGAGAGCGACGGTGGCCAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcacccatggcaacctcatcccacgagcgaagtcgtg                                                                                           >  2:2771981‑M1/1‑90 (MQ=255)

                                                               cgcCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggt                                                                                         >  2:1145723‑M1/1‑88 (MQ=255)

                                                                gcCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggtt                                                                                        >  2:4624996‑M1/1‑87 (MQ=255)

                                                                    gcgactcAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgc                                                                                    <  2:3940118‑M1/148‑69 (MQ=255)

                                                                    gCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgc                                                                                    >  2:4235341‑M1/1‑83 (MQ=255)

                                                                     cTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcg                                                                                   >  1:2995403‑M1/1‑82 (MQ=255)

                                                                        cTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgaca                                                                                <  1:407293‑M1/151‑73 (MQ=255)

                                                                         tCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacac                                                                               <  1:1272375‑M1/151‑74 (MQ=255)

                                                                          cAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacacc                                                                              <  1:1501429‑M1/151‑75 (MQ=255)

                                                                          cAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacacc                                                                              >  2:1607018‑M1/1‑77 (MQ=255)

                                                                          cAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttccatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacacc                                                                              <  2:4909011‑M1/151‑75 (MQ=255)

                                                                            gCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccct                                                                            <  2:4008138‑M1/151‑77 (MQ=255)

                                                                             cGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctg                                                                           <  2:743406‑M1/151‑78 (MQ=255)

                                                                             cGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccagggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctg                                                                           >  2:4025862‑M1/1‑74 (MQ=255)

                                                                               ggagcGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgct                                                                         <  2:1268316‑M1/150‑80 (MQ=255)

                                                                               agagCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgct                                                                         >  2:4120033‑M1/1‑72 (MQ=255)

                                                                                   ggaCGGTGGCGAGGTGCATGTCAGCCGCGAAGCACGGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgc                                                                     <  2:3813971‑M1/150‑84 (MQ=255)

                                                                                     aCGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcag                                                                   >  2:5043853‑M1/1‑66 (MQ=255)

                                                                                     aCGGCGGCGCGGTGCCTCTCAGCCGCGCACCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcaccagtacgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcag                                                                   <  2:92344‑M1/151‑86 (MQ=255)

                                                                                       ggTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgccaccctgctgcgcagca                                                                 >  2:4070900‑M1/1‑64 (MQ=255)

                                                                                           gCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtg                                                             >  2:2028529‑M1/1‑60 (MQ=255)

                                                                                            cGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtgg                                                            <  1:572066‑M1/151‑93 (MQ=255)

                                                                                             gAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggt                                                           >  1:3679232‑M1/1‑58 (MQ=255)

                                                                                             gAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggt                                                           <  2:610911‑M1/151‑94 (MQ=255)

                                                                                             gAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggt                                                           >  1:3214055‑M1/1‑58 (MQ=255)

                                                                                              aGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggtt                                                          <  2:533982‑M1/151‑95 (MQ=255)

                                                                                              aGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggtt                                                          >  1:2025095‑M1/1‑57 (MQ=255)

                                                                                               ggTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttg                                                         >  2:2686617‑M1/1‑56 (MQ=255)

                                                                                                   cATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtata                                                     >  1:731647‑M1/1‑52 (MQ=255)

                                                                                                     ggtCAGCCGCGAAGCACTGCTAAGCGCCTACAGCGGCAGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatc                                                   <  2:1586403‑M1/150‑102 (MQ=255)

                                                                                                      gTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcc                                                  >  2:2803196‑M1/1‑49 (MQ=255)

                                                                                                       tCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgccgcaagtggttgtatatcga                                                 >  2:2674254‑M1/1‑48 (MQ=255)

                                                                                                         aGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacg                                               >  2:2123961‑M1/1‑46 (MQ=255)

                                                                                                          gCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgc                                              >  1:3395628‑M1/1‑45 (MQ=255)

                                                                                                              cgAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatc                                          <  1:1842971‑M1/151‑111 (MQ=255)

                                                                                                                  gCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccg                                      <  1:1102553‑M1/151‑115 (MQ=255)

                                                                                                                  gCACGGCTAAGCGACTACAGCGTCCGCGTGTGCTTCTcgcagccgcaggacaagttcgatgtcaaccatggcaacctcatcccacgcgcgaagtcgtggttccgcgacaccctgctgcgcagcaattggttgtatatcgacgccatcgccg                                      <  2:3758831‑M1/151‑115 (MQ=255)

                                                                                                                         tAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagcggcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcat                               <  2:3269186‑M1/151‑122 (MQ=255)

                                                                                                                         tAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcct                               <  2:1023484‑M1/151‑122 (MQ=255)

                                                                                                                         tAAGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcct                               <  1:4929713‑M1/151‑122 (MQ=255)

                                                                                                                          aaGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctg                              <  1:4769195‑M1/151‑123 (MQ=255)

                                                                                                                          aaGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctg                              <  1:4652238‑M1/151‑123 (MQ=255)

                                                                                                                           aGCGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctgg                             >  2:2373060‑M1/1‑28 (MQ=255)

                                                                                                                             cGACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtg                           >  1:1893514‑M1/1‑26 (MQ=255)

                                                                                                                              gACTACAGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtga                          >  1:2320118‑M1/1‑25 (MQ=255)

                                                                                                                                   ccgcgGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtgatcaac                     <  1:2129694‑M1/149‑132 (MQ=255)

                                                                                                                                    aGCGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtgatcaacc                    <  1:624179‑M1/151‑133 (MQ=255)

                                                                                                                                      cGGCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtgatcaacctg                  <  1:4268202‑M1/151‑135 (MQ=255)

                                                                                                                                        gCCGCGTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtgatcaacctgat                >  1:2661606‑M1/1‑15 (MQ=255)

                                                                                                                                          cgcgTGATCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtgatcaacctgatcg              <  2:667976‑M1/151‑139 (MQ=255)

                                                                                                                                           gcgTGTTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtgatcaacctgatcgc             >  1:5180157‑M1/1‑12 (MQ=255)

                                                                                                                                             gtgtTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtgatcaacctgatcgcct           >  1:4480553‑M1/1‑10 (MQ=255)

                                                                                                                                             gtgtTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtgatcaacctgatcgcct           >  1:4817209‑M1/1‑10 (MQ=255)

                                                                                                                                              tgtTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtgatcaacctgatcgcctt          >  1:2770115‑M1/1‑9 (MQ=255)

                                                                                                                                               gtTCTTCGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtgcttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtgatcaacctgatcgccttg         <  2:3121782‑M1/151‑144 (MQ=255)

                                                                                                                                                  cttcGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtgatcaacctgatcgccttggcc      >  1:282925‑M1/1‑5 (MQ=255)

                                                                                                                                                  cttcGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtgatcaacctgatcgccttggcc      >  1:1364926‑M1/1‑5 (MQ=255)

                                                                                                                                                    tcGcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtgatcaacctgatcgccttggccgc    >  2:3843342‑M1/1‑3 (MQ=255)

                                                                                                                                                      gcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtgatcaacctgatcgccttggccgcgc  <  1:1651345‑M1/151‑151 (MQ=255)

                                                                                                                                                      gcgcagccgcagcacaagttcgatgtcaaccatggcaacctcatcccacgagcgaagtcgtggttccgcgacaccctgctgcgcagcaagtggttgtatatcgacgccatcgccgccagcctggtgatcaacctgatcgccttggccgcgc  >  2:3589426‑M1/1‑1 (MQ=255)

ATGCTGCTGCTCAAGGAGGGCCGCAGCGCCGTCCTGCTCGGCTGGGAGAACGATGACACCGCGCGCCTGCTACTCAGCGAGAGCGACGGTGGCGAGGTGCATGTCAGCCGCGAAGCACTGCTAAGCGACTACAGCGGCCGCGTGTTCTTCGTGCGGATTCCACGCTGACTCGGACACCCATTCCACGCGCATCCGGACAGTGATTCCACGCTGATCCGGACACTCATTCCACGAGCATCCGGACACCGACTCCACGGTCATCCGGACACTTTTCTGGCAGGCAGCCACGCAGGATTTATTC  >  CP009974/1901356‑1901656

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`