mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutation | |||||
|---|---|---|---|---|---|
| evidence | position | mutation | annotation | gene | description |
| JC | 1,881,835 | (GGTACGCTGGAAATGA)1→2 | coding (175/801 nt) | manY → | PTS mannose transporter subunit IIC |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_012967 | 3893603–3894995 | 3896273 | 1279–2671 | 91 [86] | [0] 266 | [ECB_RS25215]–[rbsA] | [ECB_RS25215],ECB_RS25215,rbsD,[rbsA] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_012967 | = 3652532 | NA (NA) | 249 (1.000) | 110/140 | 0.2 | 100% | intergenic (+25/+254) | ECB_RS25190/glyS | IS3‑like element IS150 family transposase/glycine‑‑tRNA ligase subunit beta |
| ? | NC_012967 | 3896274 = | 0 (0.000) | coding (690/1506 nt) | rbsA | ribose ABC transporter ATP‑binding protein RbsA | |||||