mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 27 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | 1203246 = | 116 (1.080) | 33 (0.330) | 29/406 | 3.1 | 26.7% | coding (290/630 nt) | BW25113_RS05990 | protein StfP |
| ? | NZ_CP009273 | 1205075 = | 74 (0.740) | coding (40/540 nt) | BW25113_RS06005 | phage tail protein | |||||
| * | ? | NZ_CP009273 | 4532499 = | 7 (0.060) | 23 (0.220) | 22/420 | 4.6 | 50.7% | intergenic (+49/‑433) | fimE/fimA | type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA |
| ? | NZ_CP009273 | 4532813 = | 38 (0.370) | intergenic (+363/‑119) | fimE/fimA | type 1 fimbria switch DNA invertase FimE/type 1 fimbrial major subunit FimA | |||||
| * | ? | NZ_CP009273 | = 1203261 | 123 (1.140) | 23 (0.230) | 21/406 | 4.7 | 19.7% | coding (305/630 nt) | BW25113_RS05990 | protein StfP |
| ? | NZ_CP009273 | = 1205058 | 74 (0.740) | coding (57/540 nt) | BW25113_RS06005 | phage tail protein | |||||
| * | ? | NZ_CP009273 | = 4046926 | 214 (1.990) | 7 (0.070) | 6/406 | 10.0 | 3.3% | intergenic (+148/+81) | hemN/yshB | oxygen‑independent coproporphyrinogen III oxidase/YshB family small membrane protein |
| ? | NZ_CP009273 | = 4046933 | 209 (2.090) | intergenic (+155/+74) | hemN/yshB | oxygen‑independent coproporphyrinogen III oxidase/YshB family small membrane protein | |||||
| * | ? | NZ_CP009273 | 757279 = | 104 (0.970) | 6 (0.060) | 6/416 | 10.1 | 5.8% | coding (302/1218 nt) | odhB | 2‑oxoglutarate dehydrogenase complex dihydrolipoyllysine‑residue succinyltransferase |
| ? | NZ_CP009273 | 757346 = | 95 (0.930) | coding (369/1218 nt) | odhB | 2‑oxoglutarate dehydrogenase complex dihydrolipoyllysine‑residue succinyltransferase | |||||
| * | ? | NZ_CP009273 | = 3849631 | 81 (0.750) | 6 (0.060) | 6/422 | 10.3 | 6.9% | coding (37/348 nt) | yidH | YidH family protein |
| ? | NZ_CP009273 | = 3849640 | 84 (0.810) | coding (28/348 nt) | yidH | YidH family protein | |||||
| * | ? | NZ_CP009273 | = 244648 | 96 (0.890) | 4 (0.040) | 4/390 | 10.9 | 4.4% | intergenic (+27/+197) | rayT/BW25113_RS01160 | REP‑associated tyrosine transposase RayT/flagellar biosynthesis protein FlhA |
| ? | NZ_CP009273 | 244750 = | 89 (0.930) | intergenic (+129/+95) | rayT/BW25113_RS01160 | REP‑associated tyrosine transposase RayT/flagellar biosynthesis protein FlhA | |||||
| * | ? | NZ_CP009273 | 2943947 = | 129 (1.200) | 4 (0.040) | 4/418 | 11.4 | 3.1% | intergenic (+15/+47) | argA/recD | amino‑acid N‑acetyltransferase/exodeoxyribonuclease V subunit alpha |
| ? | NZ_CP009273 | 2943984 = | 129 (1.260) | intergenic (+52/+10) | argA/recD | amino‑acid N‑acetyltransferase/exodeoxyribonuclease V subunit alpha | |||||
| * | ? | NZ_CP009273 | = 2871515 | 74 (0.690) | 3 (0.030) | 3/378 | 11.4 | 4.6% | noncoding (456/763 nt) | CRISPR | repeat region |
| ? | NZ_CP009273 | 2871640 = | 62 (0.670) | noncoding (581/763 nt) | CRISPR | repeat region | |||||
| * | ? | NZ_CP009273 | = 725138 | 77 (0.710) | 5 (0.050) | 4/416 | 11.4 | 6.8% | coding (100/4194 nt) | rhsC | rhs element protein RhsC |
| ? | NZ_CP009273 | = 725297 | 64 (0.630) | coding (259/4194 nt) | rhsC | rhs element protein RhsC | |||||