| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 784,729 | Δ2 bp :: IS186 (+) +9 bp | coding (598‑606/2262 nt) | ybhJ → | predicted hydratase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 590717 = | NA (NA) | 150 (0.940) | 84/150 | 0.4 | 99.2% | noncoding (3/1343 nt) | IS186 | repeat region |
| ? | REL606 | = 784737 | 1 (0.010) | coding (606/2262 nt) | ybhJ | predicted hydratase | |||||
| * | ? | REL606 | = 592057 | NA (NA) | 134 (0.880) | 76/144 | 0.6 | 99.2% | noncoding (1343/1343 nt) | IS186 | repeat region |
| ? | REL606 | 784729 = | 1 (0.010) | coding (598/2262 nt) | ybhJ | predicted hydratase | |||||
Only 100 of 150 total aligned reads displayed.
TCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/590788‑590717‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAGTCGATATCCCA < REL606/784737‑784663 TCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCC > 1:112510/1‑76TCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCC < 1:3990600/76‑1 CGTGAGAGTAATTCATCGGCGCGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCT < 2:3542255/76‑1 CGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCT < 1:3017686/76‑1 GTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTG > 2:4191215/1‑76 GTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTG < 1:4855308/76‑1 TGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGT > 2:3508768/1‑76 TGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGT > 2:2843312/1‑76 GAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTG < 2:776191/76‑1 GAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTG < 2:2336468/76‑1 GAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTG < 1:3990812/76‑1 AGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGG > 2:905721/1‑76 AGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGG < 2:4593528/76‑1 AGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGG < 1:2066715/76‑1 GAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGC > 2:2271862/1‑76 AGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCC > 1:1484245/1‑76 TAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCC > 2:4614074/1‑76 AATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCA < 2:4390619/76‑1 AATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCA < 2:4931126/76‑1 AATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCA < 2:2390786/76‑1 AATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCA > 1:4294895/1‑76 AATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCA > 2:2909402/1‑76 TTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACA < 1:65940/76‑1 TTCATCGGCACGTTAAATCATATCAGGCATAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACA < 2:1615861/76‑1 TCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACAT < 1:1930151/76‑1 TCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACAT < 2:547285/76‑1 CATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATA > 1:1089605/1‑76 ATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATAC < 1:3891738/76‑1 ATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATAC > 1:387534/1‑76 ATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATAC < 2:1288048/76‑1 CGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGG < 1:1579800/76‑1 CGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGG < 1:4443317/76‑1 CACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGC < 2:3082271/76‑1 CACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGC < 2:4483521/76‑1 CACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGC < 2:338455/76‑1 ACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCA > 1:2066462/1‑76 CGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAG < 2:2236531/76‑1 GTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGG < 1:1439219/76‑1 TTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGT > 1:5086008/1‑76 AAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTT < 1:3541571/76‑1 AAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTT > 2:558110/1‑76 AAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTT > 2:1910393/1‑76 AAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTT < 1:91102/76‑1 AAATCATATCAGGCGCAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTT > 2:1598897/1‑76 TCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCC < 2:308899/76‑1 CATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCG < 2:4067151/76‑1 CATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCG < 1:498524/76‑1 ATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGG > 2:4642345/1‑76 CAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAG < 2:1438127/76‑1 AGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGA > 1:798468/1‑76 GGCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGAT < 1:960657/76‑1 GCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATG < 1:471664/76‑1 GCGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATG < 2:89210/76‑1 CGTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGC > 1:4264502/1‑76 GTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCA < 2:68168/76‑1 GTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCA > 2:34266/1‑76 GTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCA > 1:1480497/1‑76 GTAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCA > 1:4294315/1‑76 TAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCAC < 1:898245/76‑1 TAATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCAC > 2:4712760/1‑76 AATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACC > 1:3250328/1‑76 ATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCG > 2:3757235/1‑76 ATACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCG < 1:459537/76‑1 TACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGC > 1:4162421/1‑76 ACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCA > 2:1210382/1‑76 ACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCA < 1:263686/76‑1 ACCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCA < 2:1461865/76‑1 CCACAACCCTTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAA > 1:1321841/1‑76 AACCCTTAAGGTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCAC < 2:1271499/76‑1 TTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCG > 2:2578065/1‑76 TTAAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCG > 1:4674178/1‑76 TTAAGTTAGCGCTTATGATCCTGTGGCACCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCG > 2:1804811/1‑76 TAAGTTAGCGCTTATGATCCTGTGGCCCCGCATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGG < 2:3698030/76‑1 AAGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGA > 2:2493144/1‑76 AGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGAT < 2:4349933/76‑1 AGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGAT > 2:1877995/1‑76 AGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGAT < 2:3957674/76‑1 AGTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGAT > 2:2667812/1‑76 GTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATA > 1:3744837/1‑76 GTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATA < 1:3808144/76‑1 GTTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATA < 2:4521012/76‑1 TTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAG < 1:2920817/76‑1 TTAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAG > 1:1794393/1‑76 TAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAGT > 1:4666409/1‑76 TAGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACACCCGGATAGT > 1:4899869/1‑76 AGCGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAGTC < 1:2836949/76‑1 CGCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAGTCGA < 1:4950729/76‑1 tCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAGTCGAT > 2:765627/2‑76 GCTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAGTCGAT > 1:633772/1‑76 CTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAGTCGATA > 2:1743909/1‑76 CTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAGTCGATA > 2:4971749/1‑76 CTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAGTCGATA > 2:3939180/1‑76 CTTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGAGGCACCGCAACCACGCCCGGATAGTCGATA < 1:3578303/76‑1 TTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAGTCGATAT < 2:1124920/76‑1 TTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAGTCGATAT < 1:2200888/76‑1 TTATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCACGGATAGTCGATAT > 1:1671826/1‑76 TATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAGTCGATATC < 2:4763429/76‑1 ATGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAGTCGATATCC > 2:676553/1‑76 TGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAGTCGATATCCC > 2:2179586/1‑76 TGATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACAGCAACCACGCCCGGATAGTCGATATCCC > 2:398878/1‑76 TCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/590788‑590717‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTGGCCCCACATACGGCGCAGGTTTTCCGGTCAGATGCACCGCAACCACGCCCGGATAGTCGATATCCCA < REL606/784737‑784663 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |