| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 784,729 | Δ2 bp :: IS186 (+) +9 bp | coding (598‑606/2262 nt) | ybhJ → | predicted hydratase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 590717 = | NA (NA) | 150 (0.940) | 84/150 | 0.4 | 99.2% | noncoding (3/1343 nt) | IS186 | repeat region |
| ? | REL606 | = 784737 | 1 (0.010) | coding (606/2262 nt) | ybhJ | predicted hydratase | |||||
| * | ? | REL606 | = 592057 | NA (NA) | 134 (0.880) | 76/144 | 0.6 | 99.2% | noncoding (1343/1343 nt) | IS186 | repeat region |
| ? | REL606 | 784729 = | 1 (0.010) | coding (598/2262 nt) | ybhJ | predicted hydratase | |||||
Only 100 of 179 total aligned reads displayed.
AAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGA > REL606/590642‑590788 | aGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCa < 1:3586333/76‑1 (MQ=255) aGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCa > 1:3353769/1‑76 (MQ=255) ggAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCAt < 1:179726/76‑1 (MQ=255) ggAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCAt < 2:737623/76‑1 (MQ=255) gAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATa < 1:1353218/76‑1 (MQ=255) aCGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAg < 1:1775525/76‑1 (MQ=255) cGTAATATTGAGTTTAAGGCTGTTCTCGCTTCCGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAgc < 1:2145291/76‑1 (MQ=255) cGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAgc > 1:1042901/1‑76 (MQ=255) cGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAgc > 2:2743732/1‑76 (MQ=255) cGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAgc < 1:3333389/76‑1 (MQ=255) gTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAgcg > 2:1579999/1‑76 (MQ=255) gTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAgcg < 1:2287614/76‑1 (MQ=255) gTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAgcg > 2:2723717/1‑76 (MQ=255) tAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAgcgc > 1:1572757/1‑76 (MQ=255) tAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAgcgc > 1:4700338/1‑76 (MQ=255) tAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGGAATCCCATAAgcgc > 1:3056966/1‑76 (MQ=255) tAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGGAGCCGTTGTGCGGGGAGTAATCCCATCAgcgc > 2:2088931/1‑76 (MQ=255) aaTATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCt > 1:4791134/1‑76 (MQ=255) atatTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTa > 1:2020177/1‑76 (MQ=255) tatTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTaa < 2:2133229/76‑1 (MQ=255) tatTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTaa > 1:5083069/1‑76 (MQ=255) tatTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTaa < 1:865268/76‑1 (MQ=255) tatTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTATGCGGGGAGTAATCCCATAAGCGCTat > 1:5123939/1‑75 (MQ=255) tGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACtt > 1:4739323/1‑76 (MQ=255) tGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACtt < 1:2245735/76‑1 (MQ=255) gAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTa > 1:3341466/1‑76 (MQ=255) aGTTTAAGTCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTaa < 1:4100157/76‑1 (MQ=255) gTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCTGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAg < 1:4623864/76‑1 (MQ=255) ttAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAggg > 1:2432059/1‑76 (MQ=255) ttAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAggg < 1:3001094/76‑1 (MQ=255) ttAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGACGTTGTGCGGGGAGTAATCCTATAAGCGCGCACTTACggt > 2:4767222/1‑75 (MQ=25) aaGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGtt < 1:2440590/76‑1 (MQ=255) aaGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGtt > 2:2235353/1‑76 (MQ=255) aGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTtg < 2:866092/76‑1 (MQ=255) ggCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTtgt < 2:4097499/76‑1 (MQ=255) gaatGTTCTCTCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTtgt < 2:3456764/73‑1 (MQ=255) gCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTtgtg > 1:1981689/1‑76 (MQ=255) gCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTtgtg < 2:1795201/76‑1 (MQ=255) gCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTtgtg > 2:175183/1‑76 (MQ=255) gCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTtgtg > 1:3190779/1‑76 (MQ=255) cTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTgg < 1:3685248/76‑1 (MQ=255) cTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGCAGTAATCCCATAAGCGCTAACTTAAGGGCTgggg > 1:3749705/1‑76 (MQ=25) cTGTGCTCGCTTACAAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTgg < 2:3419026/76‑1 (MQ=255) tGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGt > 1:1154050/1‑76 (MQ=255) tGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGt < 2:1181760/76‑1 (MQ=255) gTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATTCCATAAGCGCTAACTTAAGGGTTGTGGTa > 1:835539/1‑76 (MQ=255) ttCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTAt < 2:4893587/76‑1 (MQ=255) ttCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTAt > 1:1935666/1‑76 (MQ=255) tctcGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTAtt < 1:3832642/76‑1 (MQ=255) tctcGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTAtt > 2:4191607/1‑76 (MQ=255) ctcGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa < 2:3423745/76‑1 (MQ=255) ctcGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa < 2:1140244/76‑1 (MQ=255) ctcGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTa < 2:1366842/76‑1 (MQ=255) tcGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTAc < 2:2912182/76‑1 (MQ=255) tcGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTAc > 1:4367241/1‑76 (MQ=255) tcGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTAc > 1:4376874/1‑76 (MQ=255) ttACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCt > 2:4361120/1‑76 (MQ=255) ttACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCt > 2:2896061/1‑76 (MQ=255) ttACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCt > 1:2313609/1‑76 (MQ=255) tACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTg < 1:4139031/76‑1 (MQ=255) gAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGata > 2:701483/1‑76 (MQ=255) aaCGGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGatat < 2:4808532/76‑1 (MQ=255) aaCCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGatat > 2:243644/1‑76 (MQ=255) aaCCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGatat > 1:4276045/1‑76 (MQ=255) aCCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATg < 1:2541710/76‑1 (MQ=255) aCCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATg < 1:398006/76‑1 (MQ=255) gaagaaGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAtt > 2:5076843/1‑76 (MQ=255) aagaagTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAttt > 2:5095476/1‑76 (MQ=255) aagaagTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAttt < 1:2196073/76‑1 (MQ=255) aagaagTAGCCGTTGTGCGGGGAGGAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGAttt > 2:385444/1‑76 (MQ=255) agaagTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTa > 1:3448685/1‑76 (MQ=255) agaagTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTa < 1:448635/76‑1 (MQ=255) gaagTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTaa < 2:1595265/76‑1 (MQ=255) gaagTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTaa < 2:3758781/76‑1 (MQ=255) gaagTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTaa < 1:2268690/76‑1 (MQ=255) aagTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAAc > 2:1711467/1‑76 (MQ=255) ttAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGt < 2:2048176/75‑1 (MQ=255) tAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTg < 2:3004438/76‑1 (MQ=255) tAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTg > 1:3679615/1‑76 (MQ=255) aGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGc > 1:717336/1‑76 (MQ=255) aGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGc < 1:3494024/76‑1 (MQ=255) aGCCGTTGTGCGGGGAGCAACCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGc > 2:4701017/1‑76 (MQ=255) ccGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCg > 2:1159875/1‑76 (MQ=255) ccGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACCGCTGATATGATTTAACGTGCCg < 2:2571641/76‑1 (MQ=255) gTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGAt < 1:1874199/76‑1 (MQ=255) tgtgCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGa < 2:4289146/76‑1 (MQ=255) tgtgCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGa > 2:2876775/1‑76 (MQ=255) gtgCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGaa > 2:2314411/1‑76 (MQ=255) gtgCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGaa < 1:5049656/76‑1 (MQ=255) gCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAAtt < 2:4439017/76‑1 (MQ=255) cGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTa > 2:4355493/1‑76 (MQ=255) cGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTa < 1:2370524/76‑1 (MQ=255) cGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTa > 2:1302128/1‑76 (MQ=255) ggggAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTCCGCCTGATATGATTTAACGTGCCGATGAATTAc > 2:2392777/1‑76 (MQ=255) ggggAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTAc < 1:2432848/76‑1 (MQ=255) ggAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTActc > 1:669478/1‑76 (MQ=40) gAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTActct < 1:4556935/76‑1 (MQ=39) gTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCa < 1:2203296/76‑1 (MQ=35) tAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCAc < 1:294293/76‑1 (MQ=34) aTCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGa > 1:2101562/1‑76 (MQ=31) | AAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAGCCGTTGTGCGGGGAGTAATCCCATAAGCGCTAACTTAAGGGTTGTGGTATTACGCCTGATATGATTTAACGTGCCGATGAATTACTCTCACGA > REL606/590642‑590788 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |