mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | REL606 | 2,568,967 | 0 | A | C | 47.2% | 28.8 / 20.6 | 36 | G1380G (GGT→GGG) | yfhM | hypothetical protein |
| * | REL606 | 254,101 | 0 | T | G | 39.4% | 30.8 / 17.7 | 33 | pseudogene (530/1710 nt) | fhiA | b0229; flagellar system protein |
| * | REL606 | 154,497 | 0 | T | G | 36.4% | 57.7 / 23.5 | 44 | A191A (GCA→GCC) | yadL | predicted fimbrial‑like adhesin protein |
| * | REL606 | 2,231,892 | 0 | A | C | 36.1% | 49.9 / 12.7 | 36 | T25P (ACC→CCC) | yejH | predicted ATP‑dependet helicase |
| * | REL606 | 275,418 | 0 | A | C | 32.6% | 60.3 / 21.8 | 43 | F528V (TTT→GTT) | yagW | predicted receptor |
| * | REL606 | 1,484,105 | 0 | A | G | 32.0% | 32.3 / 11.6 | 25 | G55G (GGA→GGG) | ydcU | predicted spermidine/putrescine transporter subunit |
| * | REL606 | 1,416,838 | 0 | T | G | 30.0% | 82.8 / 11.4 | 50 | intergenic (+1/‑4) | ECB_01334/ECB_01335 | putative Lysozyme/conserved hypothetical protein |
| * | REL606 | 417,321 | 0 | T | G | 29.0% | 49.2 / 10.3 | 31 | T27P (ACA→CCA) | ECB_00378 | conserved hypothetical protein |
| * | REL606 | 2,296,329 | 0 | A | C | 28.6% | 63.7 / 11.6 | 35 | intergenic (‑149/‑66) | inaA/yfaH | hypothetical protein/hypothetical protein |
| * | REL606 | 2,008,240 | 0 | T | G | 25.5% | 96.4 / 11.4 | 47 | T41P (ACC→CCC) | ECB_01907 | conserved hypothetical protein |