| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 4,349,332 | Δ5 bp | intergenic (‑199/‑73) | yjeH ← / → groES | predicted transporter/co‑chaperonin GroES |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 4349332 | 4349336 | 5 | 49 [0] | [0] 49 | yjeH/groES | predicted transporter/co‑chaperonin GroES |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 4349331 | 0 (0.000) | 46 (0.880) | 32/146 | 0.6 | 100% | intergenic (‑198/‑78) | yjeH/groES | predicted transporter/co‑chaperonin GroES |
| ? | REL606 | 4349337 = | 0 (0.000) | intergenic (‑204/‑72) | yjeH/groES | predicted transporter/co‑chaperonin GroES | |||||
CGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/4349262‑4349331‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATG > REL606/4349337‑4349411 CGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGC > 1:430049/1‑76 TTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGG > 1:1035190/1‑76 TTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGG > 1:159212/1‑76 GTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAA < 1:1377410/76‑1 GTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAA > 1:1371921/1‑76 CTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCA < 1:1414750/76‑1 GATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACG > 2:1077326/1‑76 GATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACG > 2:7430/1‑76 ATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGT < 2:1098812/76‑1 TTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGT > 1:1627104/1‑76 TCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCA < 1:7924/76‑1 CTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCAC > 1:1314127/1‑76 CTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCAC > 1:1603561/1‑76 TTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACC > 1:1043812/1‑76 TTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCC > 1:828949/1‑76 TTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCAT > 1:481832/1‑76 TTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCAT > 2:1293227/1‑76 TCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATA > 1:399471/1‑76 TCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATA > 2:986427/1‑76 TCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATA > 2:1599745/1‑76 CCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAGCCACGTAAGCTCCGGCGTCACCCATAA > 1:338663/1‑76 CCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAAC < 2:1080760/76‑1 ttAAGGGGCAAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATA < 1:781483/74‑1 TGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATA > 1:852763/1‑76 TGAAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATA < 1:1216856/76‑1 AAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACG < 1:602644/76‑1 AAGGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACG < 1:1003756/76‑1 GGGGCGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGA < 1:956995/76‑1 CGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTT < 1:1006899/76‑1 CGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTT < 2:328221/76‑1 CGAAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTT > 2:323549/1‑76 AAGCCTCATCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCT < 1:485737/76‑1 TCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAG > 1:1075526/1‑76 TCCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAG < 2:659739/76‑1 CCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGA > 1:318052/1‑76 CCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGA > 2:608113/1‑76 CCCCATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGA > 2:338271/1‑76 CATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTT < 1:379977/76‑1 CATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTT > 1:349768/1‑76 CATTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTT < 2:385227/76‑1 TTTCTCACCAGCCGTGAAACCACGTAAGCTCCGGCGTAACCAATAACATATAAGGACTTTCTCAAAGGATATTTAT > 2:1277072/1‑76 TTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTAT > 2:1277062/1‑76 TTTCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTAT < 2:530093/76‑1 TCTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCA < 1:844175/76‑1 CTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAA < 2:1448988/76‑1 CTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAA < 1:605856/76‑1 CACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATG > 1:585220/1‑76 CACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATG < 1:1668559/76‑1 CACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATG < 1:1668580/76‑1 CGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/4349262‑4349331‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATG > REL606/4349337‑4349411 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |