| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 4,349,332 | Δ5 bp | intergenic (‑199/‑73) | yjeH ← / → groES | predicted transporter/co‑chaperonin GroES |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 4349332 | 4349336 | 5 | 49 [0] | [0] 49 | yjeH/groES | predicted transporter/co‑chaperonin GroES |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 4349331 | 0 (0.000) | 46 (0.880) | 32/146 | 0.6 | 100% | intergenic (‑198/‑78) | yjeH/groES | predicted transporter/co‑chaperonin GroES |
| ? | REL606 | 4349337 = | 0 (0.000) | intergenic (‑204/‑72) | yjeH/groES | predicted transporter/co‑chaperonin GroES | |||||
TTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATG > REL606/4349267‑4349411 | cgattttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGc > 1:430049‑M2/71‑76 (MQ=255) tttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCggg > 1:1035190‑M2/67‑76 (MQ=255) tttgtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCggg > 1:159212‑M2/67‑76 (MQ=255) gtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGaaa < 1:1377410‑M2/13‑1 (MQ=255) gtgctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGaaa > 1:1371921‑M2/64‑76 (MQ=255) ctgatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCa < 1:1414750‑M2/16‑1 (MQ=255) gatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACg > 2:1077326‑M2/59‑76 (MQ=255) gatcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACg > 2:7430‑M2/59‑76 (MQ=255) atcagaattttttttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGt < 2:1098812‑M2/19‑1 (MQ=255) tttctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGt > 1:1627104‑M2/46‑76 (MQ=255) tctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCa < 1:7924‑M2/33‑1 (MQ=255) ctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCAc > 1:1314127‑M2/43‑76 (MQ=255) ctttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCAc > 1:1603561‑M2/43‑76 (MQ=255) tttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCAcc > 1:1043812‑M2/42‑76 (MQ=255) ttttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCAccc > 1:828949‑M2/41‑76 (MQ=255) ttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCAt > 1:481832‑M2/39‑76 (MQ=255) ttcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCAt > 2:1293227‑M2/39‑76 (MQ=255) tcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATa > 1:399471‑M2/38‑76 (MQ=255) tcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATa > 2:986427‑M2/38‑76 (MQ=255) tcccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATa > 2:1599745‑M2/38‑76 (MQ=255) cccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAGCCACGTAAGCTCCGGCGTCACCCATaa > 1:338663‑M2/37‑76 (MQ=255) ccccttgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAAc < 2:1080760‑M2/41‑1 (MQ=255) ttaaggggcaaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATa < 1:781483‑M2/46‑1 (MQ=255) tgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATa > 1:852763‑M2/31‑76 (MQ=255) tgaaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATa < 1:1216856‑M2/46‑1 (MQ=255) aaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACg < 1:602644‑M2/48‑1 (MQ=255) aaggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACg < 1:1003756‑M2/48‑1 (MQ=255) ggggcgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGa < 1:956995‑M2/50‑1 (MQ=255) cgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACttt < 1:1006899‑M2/54‑1 (MQ=255) cgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACttt < 2:328221‑M2/54‑1 (MQ=255) cgaagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACttt > 2:323549‑M2/23‑76 (MQ=255) aagcctcatccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTtct < 1:485737‑M2/56‑1 (MQ=255) tccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGgag > 1:1075526‑M2/13‑76 (MQ=255) tccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGgag < 2:659739‑M2/64‑1 (MQ=255) ccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGgaga > 1:318052‑M2/12‑76 (MQ=255) ccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGgaga > 2:608113‑M2/12‑76 (MQ=255) ccccatttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGgaga > 2:338271‑M2/12‑76 (MQ=255) catttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGtt < 1:379977‑M2/68‑1 (MQ=255) catttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGtt > 1:349768‑M2/9‑76 (MQ=255) catttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGtt < 2:385227‑M2/68‑1 (MQ=255) tttctcACCAGCCGTGAAACCACGTAAGCTCCGGCGTAACCAATAACATATAAGGACTTTCTCAAAGGATATTTAt > 2:1277072‑M2/7‑76 (MQ=255) tttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTAt > 2:1277062‑M2/7‑76 (MQ=255) tttctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTAt < 2:530093‑M2/70‑1 (MQ=255) tctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCa < 1:844175‑M2/72‑1 (MQ=255) ctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCaa < 2:1448988‑M2/73‑1 (MQ=255) ctcACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCaa < 1:605856‑M2/73‑1 (MQ=255) cACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATg > 1:585220‑M2/2‑76 (MQ=255) cACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATg < 1:1668559‑M2/75‑1 (MQ=255) cACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATg < 1:1668580‑M2/75‑1 (MQ=255) | TTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTATCAATG > REL606/4349267‑4349411 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |