Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
MC JC | REL606 | 4,349,332 | Δ5 bp | intergenic (‑199/‑73) | yjeH ← / → groES | predicted transporter/co‑chaperonin GroES |
Missing coverage evidence... | ||||||||||
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seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | REL606 | 4349332 | 4349336 | 5 | 49 [0] | [0] 49 | yjeH/groES | predicted transporter/co‑chaperonin GroES |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 4349331 | 0 (0.000) | 46 (0.880) | 32/146 | 0.6 | 100% | intergenic (‑198/‑78) | yjeH/groES | predicted transporter/co‑chaperonin GroES |
? | REL606 | 4349337 = | 0 (0.000) | intergenic (‑204/‑72) | yjeH/groES | predicted transporter/co‑chaperonin GroES |
CGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTAT > REL606/4349262‑4349406 | cGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagc > 1:430049‑M1/1‑70 (MQ=255) tttGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccggg > 1:1035190‑M1/1‑66 (MQ=255) tttGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccggg > 1:159212‑M1/1‑66 (MQ=255) gtgCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaa < 1:1377410‑M1/76‑14 (MQ=255) gtgCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaa > 1:1371921‑M1/1‑63 (MQ=255) cTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaacca < 1:1414750‑M1/76‑17 (MQ=255) gATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacg > 2:1077326‑M1/1‑58 (MQ=255) gATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacg > 2:7430‑M1/1‑58 (MQ=255) aTCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgt < 2:1098812‑M1/76‑20 (MQ=255) tttctttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgt > 1:1627104‑M1/1‑45 (MQ=255) tctttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtca < 1:7924‑M1/76‑34 (MQ=255) ctttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcac > 1:1314127‑M1/1‑42 (MQ=255) ctttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcac > 1:1603561‑M1/1‑42 (MQ=255) tttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacc > 1:1043812‑M1/1‑41 (MQ=255) ttttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcaccc > 1:828949‑M1/1‑40 (MQ=255) ttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccat > 1:481832‑M1/1‑38 (MQ=255) ttcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccat > 2:1293227‑M1/1‑38 (MQ=255) tcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccata > 1:399471‑M1/1‑37 (MQ=255) tcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccata > 2:986427‑M1/1‑37 (MQ=255) tcCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccata > 2:1599745‑M1/1‑37 (MQ=255) cccccTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaagccacgtaagctccggcgtcacccataa > 1:338663‑M1/1‑36 (MQ=255) ccccTTGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataac < 2:1080760‑M1/76‑42 (MQ=255) ttaaggGGCAAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagata < 1:781483‑M1/74‑47 (MQ=255) tGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagata > 1:852763‑M1/1‑30 (MQ=255) tGAAGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagata < 1:1216856‑M1/76‑47 (MQ=255) aaGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacg < 1:602644‑M1/76‑49 (MQ=255) aaGGGGCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacg < 1:1003756‑M1/76‑49 (MQ=255) ggggCGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacgga < 1:956995‑M1/76‑51 (MQ=255) cGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggacttt < 1:1006899‑M1/76‑55 (MQ=255) cGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggacttt < 2:328221‑M1/76‑55 (MQ=255) cGAAGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggacttt > 2:323549‑M1/1‑22 (MQ=255) aaGCCTCATCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttct < 1:485737‑M1/76‑57 (MQ=255) tCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggag > 1:1075526‑M1/1‑12 (MQ=255) tCCCCATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggag < 2:659739‑M1/76‑65 (MQ=255) ccccATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggaga > 1:318052‑M1/1‑11 (MQ=255) ccccATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggaga > 2:608113‑M1/1‑11 (MQ=255) ccccATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggaga > 2:338271‑M1/1‑11 (MQ=255) cATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagtt < 1:379977‑M1/76‑69 (MQ=255) cATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagtt > 1:349768‑M1/1‑8 (MQ=255) cATTTCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagtt < 2:385227‑M1/76‑69 (MQ=255) tttCTCaccagccgtgaaaccacgtaagctccggcgtaaccaataacatataaggactttctcaaaggatatttat > 2:1277072‑M1/1‑6 (MQ=255) tttCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttat > 2:1277062‑M1/1‑6 (MQ=255) tttCTCaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttat < 2:530093‑M1/76‑71 (MQ=255) tctcaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatca < 1:844175‑M1/76‑73 (MQ=255) ctcaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaa < 2:1448988‑M1/76‑74 (MQ=255) ctcaccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaa < 1:605856‑M1/76‑74 (MQ=255) caccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatg > 1:585220‑M1/1‑1 (MQ=255) caccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatg < 1:1668559‑M1/76‑76 (MQ=255) caccagccgggaaaccacgtaagctccggcgtcacccataacagatacggactttctcaaaggagagttatcaatg < 1:1668580‑M1/76‑76 (MQ=255) | CGATTTTGTGCTGATCAGAATTTTTTTTCTTTTTCCCCCTTGAAGGGGCGAAGCCTCATCCCCATTTCTCTGGTCACCAGCCGGGAAACCACGTAAGCTCCGGCGTCACCCATAACAGATACGGACTTTCTCAAAGGAGAGTTAT > REL606/4349262‑4349406 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |