| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 1,290,853 | Δ92 bp | coding (818‑909/1014 nt) | hnr → | response regulator of RpoS |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 1290853 | 1290944 | 92 | 62 [0] | [0] 62 | hnr | response regulator of RpoS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1290852 | 0 (0.000) | 62 (1.290) | 44/148 | 0.1 | 100% | coding (817/1014 nt) | hnr | response regulator of RpoS |
| ? | REL606 | 1290945 = | 0 (0.000) | coding (910/1014 nt) | hnr | response regulator of RpoS | |||||
AAACCATTTACTCCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1290779‑1290852‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGG > REL606/1290945‑1291018 AAACCATTTACTCCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATT > 2:1275107/1‑76 AACCATTTACTCCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTA > 2:7136/1‑76 ACCATTTACTCCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAG < 2:421707/76‑1 CATTTACTCCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGT > 1:1369870/1‑76 ATTTACTCCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTA > 1:1002778/1‑76 ATTTACTCCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTA > 1:1108588/1‑76 ATTTACTCCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTA > 1:1108580/1‑76 TTTACTCCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAA < 1:1432462/76‑1 TTACTCCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAAC > 1:592331/1‑76 TACTCCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACG > 1:702753/1‑76 TACTCCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACG < 1:1165341/76‑1 TACTCCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACG < 1:986/76‑1 TACTCCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACG > 1:424785/1‑76 TACTCCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACG > 1:424799/1‑76 CCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTA > 2:861338/1‑76 CCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTA < 1:1025614/76‑1 tccGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTT < 2:694537/73‑1 TCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTT > 2:1028739/1‑76 TCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTT > 2:510399/1‑76 TCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTT < 2:1117777/76‑1 TCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTT > 2:754821/1‑76 AGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGA < 2:1015953/76‑1 GCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAAT < 2:331894/76‑1 CAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCA < 2:1018641/76‑1 CAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCA > 1:919963/1‑76 AATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAA < 1:367286/76‑1 CTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTG > 1:981243/1‑76 GGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAG > 1:840151/1‑76 GGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAG < 1:95938/76‑1 GCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCG > 1:609696/1‑76 AGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGAT > 1:1161477/1‑76 GTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATG < 2:919963/76‑1 TTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGC > 2:184436/1‑76 TCCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGA > 1:507767/1‑76 CCGCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGAT < 2:1020676/76‑1 GCTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGC > 1:1134866/1‑76 CTATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCC > 2:1401872/1‑76 ATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTG < 2:84099/76‑1 ATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTG < 2:1074239/76‑1 ATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTG > 2:957407/1‑76 ATTAGTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTG < 1:470208/76‑1 GTTGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAA > 1:598539/1‑76 TGGCTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATG > 1:795679/1‑76 CTATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCA > 2:261363/1‑76 TATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAA > 2:125293/1‑76 TATTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAA > 2:746525/1‑76 TTATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAAT < 1:467288/76‑1 ATCATCGCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATAT < 1:1002726/76‑1 GCGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAA < 2:1210370/76‑1 CGAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAAC > 2:350986/1‑76 GAACTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACC > 2:537613/1‑76 CTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGT > 1:556429/1‑76 CTGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGT > 1:1472775/1‑76 TGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGag > 1:41812/1‑74 TGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTG > 1:597520/1‑76 TGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTG > 1:710988/1‑76 TGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTG > 1:353573/1‑76 TGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTG < 2:667872/76‑1 TGATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTG > 1:389081/1‑76 GATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGctc > 2:960746/1‑73 GATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGG > 2:829098/1‑76 GATTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGG > 2:1198924/1‑76 AAACCATTTACTCCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCTATTAGTTGGCTATTATCATCGCGAACTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/1290779‑1290852‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aTTAGGTAACGCTTATTTGAATCAATTGAGCCAGCGATGCGATGCCTGGCAATGCCAAATATGGGGAACCGGTGG > REL606/1290945‑1291018 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |